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The map label for this gene is 197104818

Identifier: 197104818

GI number: 197104818

Start: 1532941

End: 1534020

Strand: Reverse

Name: 197104818

Synonym: PHZ_c1352

Alternate gene names: NA

Gene position: 1534020-1532941 (Counterclockwise)

Preceding gene: 197104820

Following gene: 197104816

Centisome position: 38.39

GC content: 70.09

Gene sequence:

>1080_bases
GTGACCACCTTCACTCAGCAGATCCGCGGGCGCGGCGCCCGCTCCAACGCCACCGGCCGCTACGAGAGCCAGGTCCGCGA
GGCGTTCGACGACGGCTGGACCGCCGAGGACGCCGAGCCGGCGCAGCTCGCCACCGAGCTGACCGCCGAGACCGCCAAGG
TCATCATCACCCGCAACGACAGCCCGGACGTCGGCTTCTCGGCCTCGATCAATCCCTACCGGGGGTGCGAGCACGGCTGC
ATCTACTGCTACGCCCGGCCGGCGCACGCCTACATGGGCCTCTCGCCCGGCCTCGACTTCGAATCCAAGCTGTTCTTCAA
GCCCGAGGCGGCGCGCCTGCTCGAGGCCGAGCTGTCGAAGCCGCGCTACCGGCCCGAGTTCATCCACATCGGCGGCAACA
CCGACCCCTACCAGCCGCAGGAACGGCGGCTGCGGATCACCCGCCAGGTGATCGAGGTGCTGGACCGCTTCAACCATCCC
TTCTCGATCATCACCAAGTCGGCGCTGATCCTGCGCGACCTAGACCTGCTGGCCTCGATGGCGGCGCGGAACCTGACCCG
CGTGGCGATCTCGGTGACCAGCCTCGACCGGCGGCTGTCACGCTCGATGGAGCCGCGCGCCGCCGCGCCCGACAAGCGCA
TCGAGGCGATCCGCCGGCTGACCGGCGCGGGCGTGCCGGTGACGGTGATGTTCGCCCCCTGCATTCCGGGGCTGAACGAC
CATGAGATGGAGGCGGTGCTGGAGCGCGCCGCCGAGGCGGGAGCCAGCGGGGCCGGCTATGTCGCGCTGCGCCTGCCGCT
GGAGATCAAGGACCTGTTCCGCGAGTGGCTGGAGACCGACCATCCCGACCGTGCGCGCAAGGTCATGTCGCTGGTCCGCC
AGATGCGCGGGGGCAAGGACTACGACGCCCAGTGGGGCAAGCGGATGCGCGGCGAAGGCCCGATCGGCGAGCTGATGAAC
GCCCGCTTCAAGGCGGCTCAGAAGCGCTACGGCCTCACCCAGCGCTGGGGCGAACTGGACGTCTTCCGGTTCCGGGTTCC
GCCGAAGGCCGGCGACCAGATCGACCTGTTCGGCGCCTAG

Upstream 100 bases:

>100_bases
CATCGACGATCACGGAAAGCATGGCCGGACAAGCGCCGCGGAACCCCGCGCCGTCAATGTGGTTCTTGTTTTGTTCCCCG
CGAAACACTAGAAGGAGGCG

Downstream 100 bases:

>100_bases
AGCGCCTCGGCCACGAAGGTGCGGCGGGGCGGCGGACCCAGCCGCCCCTCGCCCGCCATCCGCACGATCCGCAGGAAGTG
CGGGCACTCCATCGGACTGG

Product: nitrogenase cofactor biosynthesis protein NifB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MTTFTQQIRGRGARSNATGRYESQVREAFDDGWTAEDAEPAQLATELTAETAKVIITRNDSPDVGFSASINPYRGCEHGC
IYCYARPAHAYMGLSPGLDFESKLFFKPEAARLLEAELSKPRYRPEFIHIGGNTDPYQPQERRLRITRQVIEVLDRFNHP
FSIITKSALILRDLDLLASMAARNLTRVAISVTSLDRRLSRSMEPRAAAPDKRIEAIRRLTGAGVPVTVMFAPCIPGLND
HEMEAVLERAAEAGASGAGYVALRLPLEIKDLFREWLETDHPDRARKVMSLVRQMRGGKDYDAQWGKRMRGEGPIGELMN
ARFKAAQKRYGLTQRWGELDVFRFRVPPKAGDQIDLFGA

Sequences:

>Translated_359_residues
MTTFTQQIRGRGARSNATGRYESQVREAFDDGWTAEDAEPAQLATELTAETAKVIITRNDSPDVGFSASINPYRGCEHGC
IYCYARPAHAYMGLSPGLDFESKLFFKPEAARLLEAELSKPRYRPEFIHIGGNTDPYQPQERRLRITRQVIEVLDRFNHP
FSIITKSALILRDLDLLASMAARNLTRVAISVTSLDRRLSRSMEPRAAAPDKRIEAIRRLTGAGVPVTVMFAPCIPGLND
HEMEAVLERAAEAGASGAGYVALRLPLEIKDLFREWLETDHPDRARKVMSLVRQMRGGKDYDAQWGKRMRGEGPIGELMN
ARFKAAQKRYGLTQRWGELDVFRFRVPPKAGDQIDLFGA
>Mature_358_residues
TTFTQQIRGRGARSNATGRYESQVREAFDDGWTAEDAEPAQLATELTAETAKVIITRNDSPDVGFSASINPYRGCEHGCI
YCYARPAHAYMGLSPGLDFESKLFFKPEAARLLEAELSKPRYRPEFIHIGGNTDPYQPQERRLRITRQVIEVLDRFNHPF
SIITKSALILRDLDLLASMAARNLTRVAISVTSLDRRLSRSMEPRAAAPDKRIEAIRRLTGAGVPVTVMFAPCIPGLNDH
EMEAVLERAAEAGASGAGYVALRLPLEIKDLFREWLETDHPDRARKVMSLVRQMRGGKDYDAQWGKRMRGEGPIGELMNA
RFKAAQKRYGLTQRWGELDVFRFRVPPKAGDQIDLFGA

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40327; Mature: 40195

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFTQQIRGRGARSNATGRYESQVREAFDDGWTAEDAEPAQLATELTAETAKVIITRND
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEECCC
SPDVGFSASINPYRGCEHGCIYCYARPAHAYMGLSPGLDFESKLFFKPEAARLLEAELSK
CCCCCCCCCCCCCCCCCCCEEEEEECHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCC
PRYRPEFIHIGGNTDPYQPQERRLRITRQVIEVLDRFNHPFSIITKSALILRDLDLLASM
CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AARNLTRVAISVTSLDRRLSRSMEPRAAAPDKRIEAIRRLTGAGVPVTVMFAPCIPGLND
HHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCH
HEMEAVLERAAEAGASGAGYVALRLPLEIKDLFREWLETDHPDRARKVMSLVRQMRGGKD
HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
YDAQWGKRMRGEGPIGELMNARFKAAQKRYGLTQRWGELDVFRFRVPPKAGDQIDLFGA
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCCCCEEECCC
>Mature Secondary Structure 
TTFTQQIRGRGARSNATGRYESQVREAFDDGWTAEDAEPAQLATELTAETAKVIITRND
CCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEECCC
SPDVGFSASINPYRGCEHGCIYCYARPAHAYMGLSPGLDFESKLFFKPEAARLLEAELSK
CCCCCCCCCCCCCCCCCCCEEEEEECHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCC
PRYRPEFIHIGGNTDPYQPQERRLRITRQVIEVLDRFNHPFSIITKSALILRDLDLLASM
CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AARNLTRVAISVTSLDRRLSRSMEPRAAAPDKRIEAIRRLTGAGVPVTVMFAPCIPGLND
HHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCH
HEMEAVLERAAEAGASGAGYVALRLPLEIKDLFREWLETDHPDRARKVMSLVRQMRGGKD
HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
YDAQWGKRMRGEGPIGELMNARFKAAQKRYGLTQRWGELDVFRFRVPPKAGDQIDLFGA
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]