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The map label for this gene is smf [H]

Identifier: 197104784

GI number: 197104784

Start: 1497202

End: 1498290

Strand: Reverse

Name: smf [H]

Synonym: PHZ_c1318

Alternate gene names: 197104784

Gene position: 1498290-1497202 (Counterclockwise)

Preceding gene: 197104785

Following gene: 197104783

Centisome position: 37.49

GC content: 77.78

Gene sequence:

>1089_bases
TTGATCCTAAAGCTCACCGACGCCCAGCGCCGCGACTGGCTGCGGCTGGCCCGCACCGAGAACGTGGGGCCGGTCACCTT
CGACCAGCTGATCCAGCGGTTCGGCGAGCCGGCCCTGGCGCTGGCCGCCCTGCCCGACCTCGCCCGCCGGGGCGGACGCA
GCCACATCCGCATCCCCACCGAGGCCCAGGCCGAGGACGAGCTCGCCGCCGGCGCGGCGCTGGAGGCGCGGCTGATCGCG
TCGTGCGAGCCCGACTTCCCCCAGGCGCTCGCCGCCCTCGACCCGCCCCCGCCGCTGATCTGGACGCGCGGCAGGGCCGA
GCTGCTGGACCGGCCGTGCGTGGCGGTCGTCGGCGCCCGGGTCGCCTCGGCCGCCGGCCAGCGCTTCGCCCGCGGCCTCG
CCGCCGACCTCGGGGGCGCCGGCCACGTGGTCGTCTCGGGCATGGCGCGCGGCATCGACGCCGCCGCGCACGAAGGCGCC
CTGCCCACCGGAACGGTGGCGGTCCTCGGCGGCGGGATCGACGACGTCTATCCGCCCGAGCACCGGCCGCTGTACGAGCG
CCTCGTGGAGGCCGGCTGCGTGGTCTCGGAAAGCGAGCCCGGCCGCACCGCCGTGGCCCGCGACTTCCCCCGCCGCAACC
GGATCATCGCCGGCCTCTCCCGCGCAGTGGTGGTGGTCGAGGCCGAGATGCGCTCGGGCTCGCTGATCACCGCCCGGCTG
GCCGCCGAGCAGGGCCGCGAGGTCCTGGCCGTGCCCGGCTCGCCCCTGGATCCGCGGGCGAAGGGGACCAACGACCTGAT
CCGCCAGGGCGCGGGGCTGTGCGAGGGCGTGGACGACGTGCTGCGGGCGCTGGAGGGGCTCTCGGGCTTCCGCGAGCCGG
AGCGGCCGAGGTTCGCCGGCGCCCCGCCGGTGGAGCCGGACGACGCCCTGCGCGAGCGGGTCGCGGCCCTGCTCTCCCCC
ACCCCCGTCAGCCGCGACGAACTCGTGCGCGCAACCGGCGCCCCGGCCCCGGCGGTGTTCGCCGCCCTGGTGGAGCTGTC
GCTCGCCGGCCGCGCCGACCTGCTGCCCGGCGGCATGGTCAGCGGATGA

Upstream 100 bases:

>100_bases
TCTTCATGGCCATCCTGATCTACGTCCGCCATGCGCCCAACATCCGCCGCCTGCTGAAGGGCGAGGAGCCGCGCATCGGC
GGCGGCAAGAAGGCGGACGC

Downstream 100 bases:

>100_bases
GCCCCTTAAGGGGCTCGGCGGAGCCGCGGCCTCGCGCCCGTTGACAGCGCCTAGCGGGCACCCCCACCTTCCGCGCTCTT
TTCGGATCAGACCCAGAACA

Product: dprA protein

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MILKLTDAQRRDWLRLARTENVGPVTFDQLIQRFGEPALALAALPDLARRGGRSHIRIPTEAQAEDELAAGAALEARLIA
SCEPDFPQALAALDPPPPLIWTRGRAELLDRPCVAVVGARVASAAGQRFARGLAADLGGAGHVVVSGMARGIDAAAHEGA
LPTGTVAVLGGGIDDVYPPEHRPLYERLVEAGCVVSESEPGRTAVARDFPRRNRIIAGLSRAVVVVEAEMRSGSLITARL
AAEQGREVLAVPGSPLDPRAKGTNDLIRQGAGLCEGVDDVLRALEGLSGFREPERPRFAGAPPVEPDDALRERVAALLSP
TPVSRDELVRATGAPAPAVFAALVELSLAGRADLLPGGMVSG

Sequences:

>Translated_362_residues
MILKLTDAQRRDWLRLARTENVGPVTFDQLIQRFGEPALALAALPDLARRGGRSHIRIPTEAQAEDELAAGAALEARLIA
SCEPDFPQALAALDPPPPLIWTRGRAELLDRPCVAVVGARVASAAGQRFARGLAADLGGAGHVVVSGMARGIDAAAHEGA
LPTGTVAVLGGGIDDVYPPEHRPLYERLVEAGCVVSESEPGRTAVARDFPRRNRIIAGLSRAVVVVEAEMRSGSLITARL
AAEQGREVLAVPGSPLDPRAKGTNDLIRQGAGLCEGVDDVLRALEGLSGFREPERPRFAGAPPVEPDDALRERVAALLSP
TPVSRDELVRATGAPAPAVFAALVELSLAGRADLLPGGMVSG
>Mature_362_residues
MILKLTDAQRRDWLRLARTENVGPVTFDQLIQRFGEPALALAALPDLARRGGRSHIRIPTEAQAEDELAAGAALEARLIA
SCEPDFPQALAALDPPPPLIWTRGRAELLDRPCVAVVGARVASAAGQRFARGLAADLGGAGHVVVSGMARGIDAAAHEGA
LPTGTVAVLGGGIDDVYPPEHRPLYERLVEAGCVVSESEPGRTAVARDFPRRNRIIAGLSRAVVVVEAEMRSGSLITARL
AAEQGREVLAVPGSPLDPRAKGTNDLIRQGAGLCEGVDDVLRALEGLSGFREPERPRFAGAPPVEPDDALRERVAALLSP
TPVSRDELVRATGAPAPAVFAALVELSLAGRADLLPGGMVSG

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=281, Percent_Identity=41.9928825622776, Blast_Score=162, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 37862; Mature: 37862

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKLTDAQRRDWLRLARTENVGPVTFDQLIQRFGEPALALAALPDLARRGGRSHIRIPT
CEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCC
EAQAEDELAAGAALEARLIASCEPDFPQALAALDPPPPLIWTRGRAELLDRPCVAVVGAR
CCCCHHHHHHCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEECCHHHHHCCCHHHHHHHH
VASAAGQRFARGLAADLGGAGHVVVSGMARGIDAAAHEGALPTGTVAVLGGGIDDVYPPE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
HRPLYERLVEAGCVVSESEPGRTAVARDFPRRNRIIAGLSRAVVVVEAEMRSGSLITARL
CCHHHHHHHHHCCEECCCCCCCHHHHHHCCHHHHHHHCCCEEEEEEEECCCCCCEEEEHH
AAEQGREVLAVPGSPLDPRAKGTNDLIRQGAGLCEGVDDVLRALEGLSGFREPERPRFAG
HHHCCCEEEECCCCCCCCCCCCHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCC
APPVEPDDALRERVAALLSPTPVSRDELVRATGAPAPAVFAALVELSLAGRADLLPGGMV
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
SG
CC
>Mature Secondary Structure
MILKLTDAQRRDWLRLARTENVGPVTFDQLIQRFGEPALALAALPDLARRGGRSHIRIPT
CEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCC
EAQAEDELAAGAALEARLIASCEPDFPQALAALDPPPPLIWTRGRAELLDRPCVAVVGAR
CCCCHHHHHHCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEECCHHHHHCCCHHHHHHHH
VASAAGQRFARGLAADLGGAGHVVVSGMARGIDAAAHEGALPTGTVAVLGGGIDDVYPPE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
HRPLYERLVEAGCVVSESEPGRTAVARDFPRRNRIIAGLSRAVVVVEAEMRSGSLITARL
CCHHHHHHHHHCCEECCCCCCCHHHHHHCCHHHHHHHCCCEEEEEEEECCCCCCEEEEHH
AAEQGREVLAVPGSPLDPRAKGTNDLIRQGAGLCEGVDDVLRALEGLSGFREPERPRFAG
HHHCCCEEEECCCCCCCCCCCCHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCC
APPVEPDDALRERVAALLSPTPVSRDELVRATGAPAPAVFAALVELSLAGRADLLPGGMV
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
SG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]