| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104766
Identifier: 197104766
GI number: 197104766
Start: 1478500
End: 1479663
Strand: Direct
Name: 197104766
Synonym: PHZ_c1300
Alternate gene names: NA
Gene position: 1478500-1479663 (Clockwise)
Preceding gene: 197104765
Following gene: 197104767
Centisome position: 37.0
GC content: 72.08
Gene sequence:
>1164_bases GTGAGCCTGAAGCCGGCGGTGAACGTCTCCCGCCGCATCGCCGACATCGGCCGCGAGGCTTGGGACGCCTGCGCCAGGAA CCCCGCGCACCTCGGCAATCCCTTCATCCACTACGACTTCCTGGACGCGCTCGAGGCGGCCGGATGCGCCGTCGAGCGCC AGGGCTGGGGACCGCACCACCTGTCGGTGGAGGACGAGGCGGGGAGGGTGGCGGCGGTCATGCCGCTGTACCTGAAGTCC CACAGCCAGGGAGAGTACGTCTTCGATCACGCCTGGGCCGACGCCTACGAGCGCGCCGGCGGGAGCTACTATCCCAAGCT GCTGTCGGCTGCGCCCTTCACCCCGGCGACGGGGCCGCGGCTGCTGGTCCGCCCCGACGTCCCGGCGGGCGAGGCGAGGG CGCTCCTGCTGGGCGGGGCGCTGACGGTCTGCGAGCGGTACGGCGCCTCGTCGCTGCACGTGAACTTCCCGACCGAGGCG GAGTGGCGCTGGATGGGCGACCAGGGCCTGGGGCTGCGCGAGGGCCAGCAGTACCACTGGCGGAACCGCGGCTACCGCGA CTTCGAGGACTTCCTGGGCGCGCTGTCGTCCGGCCGGCGCAAGACGATCCGCCGCGAGCGACGCGAGGCGCAGGCGCCGG TGGAGATCGTCCGCCTCACCGGCGGCGACCTCACGGAAGAGCACTGGGACGCCTTCTTCGGCTTCTACATGGACACCGGC TCGCGCAAGTGGGGCCGGCCGTACCTGACGCGCCCGTTCTTCTCGCTGCTGGGCGAGCGGATGGCCGACCGGGTGCTGCT GGTCATGGCCCGGCGCGAGGGGCGCTGGGTCGCGGGCGCCCTGAACCTGATCGGCGACGACTGCCTCTACGGCCGCCACT GGGGCTGCGTGGAGGAGATCCCCTTCCTGCACTTCGAGCTCTGCTACTACCAGGCCATCGAGTGGGCCATCGCGCAGGGC CTCGAGAGGGTCGAGGCCGGGGCCCAGGGCCAGCACAAGATCGCCCGCGGCTACCTGCCCACGCCGGTCTACTCGGCCCA CTACATCGCCGATCCCGCGCTCCGCGGACCCGTCGAGCGCTTCCTCGAGCAGGAGCGGGCGGGCGTGGAGGAGGAGATCG AATGGCTCGCCGAGGAGTTCTCGCCGTTCCGGCAGGGCGGCTGA
Upstream 100 bases:
>100_bases CCGAGGGAATGCCGGTGATCGCCTGGACCGTCCGCGAGCCCGAGCAGTGGGAGGCGGTGAAGGACGGCTGCGACAACCTG ATCTTCGAGGGGTTCAGGGC
Downstream 100 bases:
>100_bases TTTGCTACGAGCGCTGGGTTGATCAGGAGTGACCCATGCTGGACGGCGCCTACGACCCCGACAACATCTTCGCGAAGATC CTGCGCGGCGAGATGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MSLKPAVNVSRRIADIGREAWDACARNPAHLGNPFIHYDFLDALEAAGCAVERQGWGPHHLSVEDEAGRVAAVMPLYLKS HSQGEYVFDHAWADAYERAGGSYYPKLLSAAPFTPATGPRLLVRPDVPAGEARALLLGGALTVCERYGASSLHVNFPTEA EWRWMGDQGLGLREGQQYHWRNRGYRDFEDFLGALSSGRRKTIRRERREAQAPVEIVRLTGGDLTEEHWDAFFGFYMDTG SRKWGRPYLTRPFFSLLGERMADRVLLVMARREGRWVAGALNLIGDDCLYGRHWGCVEEIPFLHFELCYYQAIEWAIAQG LERVEAGAQGQHKIARGYLPTPVYSAHYIADPALRGPVERFLEQERAGVEEEIEWLAEEFSPFRQGG
Sequences:
>Translated_387_residues MSLKPAVNVSRRIADIGREAWDACARNPAHLGNPFIHYDFLDALEAAGCAVERQGWGPHHLSVEDEAGRVAAVMPLYLKS HSQGEYVFDHAWADAYERAGGSYYPKLLSAAPFTPATGPRLLVRPDVPAGEARALLLGGALTVCERYGASSLHVNFPTEA EWRWMGDQGLGLREGQQYHWRNRGYRDFEDFLGALSSGRRKTIRRERREAQAPVEIVRLTGGDLTEEHWDAFFGFYMDTG SRKWGRPYLTRPFFSLLGERMADRVLLVMARREGRWVAGALNLIGDDCLYGRHWGCVEEIPFLHFELCYYQAIEWAIAQG LERVEAGAQGQHKIARGYLPTPVYSAHYIADPALRGPVERFLEQERAGVEEEIEWLAEEFSPFRQGG >Mature_386_residues SLKPAVNVSRRIADIGREAWDACARNPAHLGNPFIHYDFLDALEAAGCAVERQGWGPHHLSVEDEAGRVAAVMPLYLKSH SQGEYVFDHAWADAYERAGGSYYPKLLSAAPFTPATGPRLLVRPDVPAGEARALLLGGALTVCERYGASSLHVNFPTEAE WRWMGDQGLGLREGQQYHWRNRGYRDFEDFLGALSSGRRKTIRRERREAQAPVEIVRLTGGDLTEEHWDAFFGFYMDTGS RKWGRPYLTRPFFSLLGERMADRVLLVMARREGRWVAGALNLIGDDCLYGRHWGCVEEIPFLHFELCYYQAIEWAIAQGL ERVEAGAQGQHKIARGYLPTPVYSAHYIADPALRGPVERFLEQERAGVEEEIEWLAEEFSPFRQGG
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43699; Mature: 43567
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKPAVNVSRRIADIGREAWDACARNPAHLGNPFIHYDFLDALEAAGCAVERQGWGPHH CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEHHHHHHHHHHCCEEECCCCCCCC LSVEDEAGRVAAVMPLYLKSHSQGEYVFDHAWADAYERAGGSYYPKLLSAAPFTPATGPR CCCCCCCCCEEHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCE LLVRPDVPAGEARALLLGGALTVCERYGASSLHVNFPTEAEWRWMGDQGLGLREGQQYHW EEEECCCCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCHHHH RNRGYRDFEDFLGALSSGRRKTIRRERREAQAPVEIVRLTGGDLTEEHWDAFFGFYMDTG HCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCC SRKWGRPYLTRPFFSLLGERMADRVLLVMARREGRWVAGALNLIGDDCLYGRHWGCVEEI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHHCCCCCCHHHHC PFLHFELCYYQAIEWAIAQGLERVEAGAQGQHKIARGYLPTPVYSAHYIADPALRGPVER CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHCCCHHHHHHHH FLEQERAGVEEEIEWLAEEFSPFRQGG HHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLKPAVNVSRRIADIGREAWDACARNPAHLGNPFIHYDFLDALEAAGCAVERQGWGPHH CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEHHHHHHHHHHCCEEECCCCCCCC LSVEDEAGRVAAVMPLYLKSHSQGEYVFDHAWADAYERAGGSYYPKLLSAAPFTPATGPR CCCCCCCCCEEHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCE LLVRPDVPAGEARALLLGGALTVCERYGASSLHVNFPTEAEWRWMGDQGLGLREGQQYHW EEEECCCCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCHHHH RNRGYRDFEDFLGALSSGRRKTIRRERREAQAPVEIVRLTGGDLTEEHWDAFFGFYMDTG HCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCC SRKWGRPYLTRPFFSLLGERMADRVLLVMARREGRWVAGALNLIGDDCLYGRHWGCVEEI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHHCCCCCCHHHHC PFLHFELCYYQAIEWAIAQGLERVEAGAQGQHKIARGYLPTPVYSAHYIADPALRGPVER CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHCCCHHHHHHHH FLEQERAGVEEEIEWLAEEFSPFRQGG HHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA