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The map label for this gene is yhdW [H]

Identifier: 197104765

GI number: 197104765

Start: 1477757

End: 1478503

Strand: Direct

Name: yhdW [H]

Synonym: PHZ_c1299

Alternate gene names: 197104765

Gene position: 1477757-1478503 (Clockwise)

Preceding gene: 197104764

Following gene: 197104766

Centisome position: 36.98

GC content: 71.08

Gene sequence:

>747_bases
GTGAGATCGCGCTTCGGCGAGGCCTGGGACCTTCTCTTCCACCCGCCGATCGCGCACCGGGGGCTCTGGAGCCCCGACGG
GCCGCCCGAGAACTCGCTCTCTGCGTTCCAGGCGGCCTGCGCCGCCGGCTACGGCATCGAGCTGGACGTCCAGCTCAGCG
CCGACGGCGAGGCGGTGGTCTTCCACGACGAGACGCTGGAGCGGATGACCGGCCGGCCCGGCCGGGTCCGGGACCTGTCG
GCCGCCGACCTCGCCGACCTGCGCCTGAAGGGCTCGGACGAGAAGATCCCCACGCTGCTCGAGACCCTGGCCATCGTCGG
CCACCGCGCCATGGTCCACGTCGAGCTGAAGACCCCGCCGGGCGAGGTGGGCCCGCTGGAGCGGCGGGTGCACGAGGTGA
TCGCCGACCACAACGGTCCGCTCTGCGTGATCGGCTTCAATCCCTATTCCCACGCCTGGTTCGCCGAGCGCTATCCCGGC
GTCCTGCGGGGCCTGGACAGCTATTCCTACAAGGACCGCAAGGAGATGCCGCCCGAGCTGCGGCGGGCCTTCGCCGGGCT
GGAACACGTGGCCATCGCCCGGCCGCATTTCCTCGCTCTGGGTCTCGACATGCTGCCCAGCGAGAACGCCGCCCGCCTGC
GGGCCGAGGGAATGCCGGTGATCGCCTGGACCGTCCGCGAGCCCGAGCAGTGGGAGGCGGTGAAGGACGGCTGCGACAAC
CTGATCTTCGAGGGGTTCAGGGCGTGA

Upstream 100 bases:

>100_bases
AGGTGCTCGGCGATGCTGGCCGGCACGCCCGCTCGGCCGTGGGCGTCTACCGCCTGCCGCTCAACTTCGCCGTCGAGGTC
GACGCGGTGGTGCAGCTGTC

Downstream 100 bases:

>100_bases
GCCTGAAGCCGGCGGTGAACGTCTCCCGCCGCATCGCCGACATCGGCCGCGAGGCTTGGGACGCCTGCGCCAGGAACCCC
GCGCACCTCGGCAATCCCTT

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRSRFGEAWDLLFHPPIAHRGLWSPDGPPENSLSAFQAACAAGYGIELDVQLSADGEAVVFHDETLERMTGRPGRVRDLS
AADLADLRLKGSDEKIPTLLETLAIVGHRAMVHVELKTPPGEVGPLERRVHEVIADHNGPLCVIGFNPYSHAWFAERYPG
VLRGLDSYSYKDRKEMPPELRRAFAGLEHVAIARPHFLALGLDMLPSENAARLRAEGMPVIAWTVREPEQWEAVKDGCDN
LIFEGFRA

Sequences:

>Translated_248_residues
MRSRFGEAWDLLFHPPIAHRGLWSPDGPPENSLSAFQAACAAGYGIELDVQLSADGEAVVFHDETLERMTGRPGRVRDLS
AADLADLRLKGSDEKIPTLLETLAIVGHRAMVHVELKTPPGEVGPLERRVHEVIADHNGPLCVIGFNPYSHAWFAERYPG
VLRGLDSYSYKDRKEMPPELRRAFAGLEHVAIARPHFLALGLDMLPSENAARLRAEGMPVIAWTVREPEQWEAVKDGCDN
LIFEGFRA
>Mature_248_residues
MRSRFGEAWDLLFHPPIAHRGLWSPDGPPENSLSAFQAACAAGYGIELDVQLSADGEAVVFHDETLERMTGRPGRVRDLS
AADLADLRLKGSDEKIPTLLETLAIVGHRAMVHVELKTPPGEVGPLERRVHEVIADHNGPLCVIGFNPYSHAWFAERYPG
VLRGLDSYSYKDRKEMPPELRRAFAGLEHVAIARPHFLALGLDMLPSENAARLRAEGMPVIAWTVREPEQWEAVKDGCDN
LIFEGFRA

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 27534; Mature: 27534

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRFGEAWDLLFHPPIAHRGLWSPDGPPENSLSAFQAACAAGYGIELDVQLSADGEAVV
CCCCCCCHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEE
FHDETLERMTGRPGRVRDLSAADLADLRLKGSDEKIPTLLETLAIVGHRAMVHVELKTPP
EEHHHHHHHCCCCCCCCCCCHHHHHHEEECCCCCHHHHHHHHHHHHCCEEEEEEEEECCC
GEVGPLERRVHEVIADHNGPLCVIGFNPYSHAWFAERYPGVLRGLDSYSYKDRKEMPPEL
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCHHHHCCCCCCCCCHHCCCHHH
RRAFAGLEHVAIARPHFLALGLDMLPSENAARLRAEGMPVIAWTVREPEQWEAVKDGCDN
HHHHHCHHHHHHCCCHHEEECCHHCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHH
LIFEGFRA
HHHHCCCC
>Mature Secondary Structure
MRSRFGEAWDLLFHPPIAHRGLWSPDGPPENSLSAFQAACAAGYGIELDVQLSADGEAVV
CCCCCCCHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEE
FHDETLERMTGRPGRVRDLSAADLADLRLKGSDEKIPTLLETLAIVGHRAMVHVELKTPP
EEHHHHHHHCCCCCCCCCCCHHHHHHEEECCCCCHHHHHHHHHHHHCCEEEEEEEEECCC
GEVGPLERRVHEVIADHNGPLCVIGFNPYSHAWFAERYPGVLRGLDSYSYKDRKEMPPEL
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCHHHHCCCCCCCCCHHCCCHHH
RRAFAGLEHVAIARPHFLALGLDMLPSENAARLRAEGMPVIAWTVREPEQWEAVKDGCDN
HHHHHCHHHHHHCCCHHEEECCHHCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHH
LIFEGFRA
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]