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The map label for this gene is ychK [C]

Identifier: 197104754

GI number: 197104754

Start: 1464732

End: 1466534

Strand: Reverse

Name: ychK [C]

Synonym: PHZ_c1288

Alternate gene names: 197104754

Gene position: 1466534-1464732 (Counterclockwise)

Preceding gene: 197104757

Following gene: 197104753

Centisome position: 36.7

GC content: 74.82

Gene sequence:

>1803_bases
ATGCTGCCTGAAATCCCGGCCGATTCTGCGCTCGCCCGGCTCTTCCGCCAGGAACGCGCCCGCGAGGCGGCGATCTGGTT
CTCGCTGCCCGGCGGCCAGACCCTCTACGCGGCGGGCGATCCGGCCGACCAGCTGTTCATCCTGAGGGCCGGACGGCTCG
GCGCCTTCCGGCGCGAGGCGGGCCAGGAGCCGCAGTTCCTCGGGGTGATCCGCCCGGGGGAGCCGGCCGGCGAGATGGCG
CTGGTGGCGGGCGTACCGCACTCGGCCGACGTCGTGGCCCTGCGCGATTCCGAGGTGATCGCCCTGCCGCGCGACGTCTT
CCTCGACGCCTGCCAGGCGGACGCCTCGGTGATGACCGAACTCGCCCGGCTGATGATCCTCAGGACCCGCCAGGCGGCGA
GCCGGGGGCCGATGGGCGAGCCGTCGGTGTTCGGGTTCACGCCCGTGGGCCAGCCGGGCGCCCTGCGGCCCACGGTCGAG
CGCCTGGAGCGCGAGATCGGCCGCCTGGGCTATTCGGTGACGACCGTGGGCGTGGAAGCCGCCAGCGCCCCGACCGAATG
GTTCTCCGAGGTCGAGCGCGCGCACGACTTCGTGCTCTACGTGGCCGAGGCGGACGACGGCGGCTGGCGGCACGTCGTGG
CGCGCCAGGTGGACCGCCTGTTCCGGGTGGGCCGGGGCGACCGGCGCCCGCCGCGCGGGGATCCCGCCGGGCTGGTCGCC
TCCCCGCTCGAGGCCCAGCAGCTCGTGGACCTCATCCTGCTGCAACCGGCCGGGACCCTGCGGCCCCGCGGCTCCGAGGC
CTGGCTGGACGCCATCGGGGCCACCCGGCTCTTCCACCTGCGCCGATCCACGGACGAGGACGTGCGCCGGCTGGCGCGTG
TGCTCACCGGCCAGTCGGTGGGGCTCGTGCTGTCGGGCGGCGGGGCCCGGGCCTACGCCCACGTGGGCGCGATCCGGGCG
CTGCGCGAGCACGGGGCGCCGATCGACTTCGTGGGCGGCGTCTCCATGGGCGCGATCATCGCCGCCGGCGTCGCCATGGG
CTGGGACGACGCCGAGATGGACCGGCGCATCCGCGAGGCCTTCGTCGACACCAGCCCCCTGGACGACATCGCCTTCCCGA
TCCTGGCCATGACCCACGGGCTGAAGGTCAGCGAGCGGCTGGCCCAGCATTTCGGCGACGTGCAGATCTCCGACCTCTGG
CTGCCGTTCTTCTGCGTCTCCTCGAACCTGACGACCGGCGCCTACCACCTCCACCGCCGCGGCCTGCTGAGGAAGGCGCT
CAGGGCCAGCATCGCCCTGCCTGGCGTGCTGCCGCCCGCCACCGACGGCGCCGACGTGCTGGTGGACGGGGCGGTGATGA
AGAACTTCCCGGCCGACGTCATGCGGGCGGGACAGCTCGGGCCCATCGTCGGCGTCGACGTGACCACCGCGCGCAGCATC
ACCGCCGACGACGTCGCCCGCCCCGCCTCGGTCTGGCGCTGGTTCCGCACCGGCGAGTGGCGCAACGGCCCGCCGATCGT
CTCGCTGCTGATGCGCACGGCCACCGTCTCGACCGGCCGGGACCTGGCGGCGGCGCGCGAGGCGACGGACGTGCTCGTCC
TGCCCGAGGTCGCGGGCATCGAGATCCGGGACTGGAAGGCCTACGACCGCGCCGTGGAGGCGGGCTACCAGGCGACCCGG
GACGCCCTTTCCAAGCTCACGCGGCCGGTGACCGAGCTGCGCCGCCGCGCCTCGCTGGCGGAGGAGGCCGAGCGCGCGCG
CCTGGCGCCCTTCGGCGGGGCGCGGACGGCTGCGGCGGAATAG

Upstream 100 bases:

>100_bases
CGCCTTCGACGAGCGGGTCGGCGATGGGATTGGGCATTCGGTCTCACTCCTCTTCCGGCAAGCTGATAGCCCCCGGCGCG
CCGCGGCGCTAGGCTCCCCC

Downstream 100 bases:

>100_bases
CGCTGACGGCTGCGTTTGCCGAGCAACCAACCACCGCCCATATTGCTGCCCGTCCTGTTCAACAGCTGAAAGGAGGTGAT
CCAGTGTCTCATAGTTCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MLPEIPADSALARLFRQERAREAAIWFSLPGGQTLYAAGDPADQLFILRAGRLGAFRREAGQEPQFLGVIRPGEPAGEMA
LVAGVPHSADVVALRDSEVIALPRDVFLDACQADASVMTELARLMILRTRQAASRGPMGEPSVFGFTPVGQPGALRPTVE
RLEREIGRLGYSVTTVGVEAASAPTEWFSEVERAHDFVLYVAEADDGGWRHVVARQVDRLFRVGRGDRRPPRGDPAGLVA
SPLEAQQLVDLILLQPAGTLRPRGSEAWLDAIGATRLFHLRRSTDEDVRRLARVLTGQSVGLVLSGGGARAYAHVGAIRA
LREHGAPIDFVGGVSMGAIIAAGVAMGWDDAEMDRRIREAFVDTSPLDDIAFPILAMTHGLKVSERLAQHFGDVQISDLW
LPFFCVSSNLTTGAYHLHRRGLLRKALRASIALPGVLPPATDGADVLVDGAVMKNFPADVMRAGQLGPIVGVDVTTARSI
TADDVARPASVWRWFRTGEWRNGPPIVSLLMRTATVSTGRDLAAAREATDVLVLPEVAGIEIRDWKAYDRAVEAGYQATR
DALSKLTRPVTELRRRASLAEEAERARLAPFGGARTAAAE

Sequences:

>Translated_600_residues
MLPEIPADSALARLFRQERAREAAIWFSLPGGQTLYAAGDPADQLFILRAGRLGAFRREAGQEPQFLGVIRPGEPAGEMA
LVAGVPHSADVVALRDSEVIALPRDVFLDACQADASVMTELARLMILRTRQAASRGPMGEPSVFGFTPVGQPGALRPTVE
RLEREIGRLGYSVTTVGVEAASAPTEWFSEVERAHDFVLYVAEADDGGWRHVVARQVDRLFRVGRGDRRPPRGDPAGLVA
SPLEAQQLVDLILLQPAGTLRPRGSEAWLDAIGATRLFHLRRSTDEDVRRLARVLTGQSVGLVLSGGGARAYAHVGAIRA
LREHGAPIDFVGGVSMGAIIAAGVAMGWDDAEMDRRIREAFVDTSPLDDIAFPILAMTHGLKVSERLAQHFGDVQISDLW
LPFFCVSSNLTTGAYHLHRRGLLRKALRASIALPGVLPPATDGADVLVDGAVMKNFPADVMRAGQLGPIVGVDVTTARSI
TADDVARPASVWRWFRTGEWRNGPPIVSLLMRTATVSTGRDLAAAREATDVLVLPEVAGIEIRDWKAYDRAVEAGYQATR
DALSKLTRPVTELRRRASLAEEAERARLAPFGGARTAAAE
>Mature_600_residues
MLPEIPADSALARLFRQERAREAAIWFSLPGGQTLYAAGDPADQLFILRAGRLGAFRREAGQEPQFLGVIRPGEPAGEMA
LVAGVPHSADVVALRDSEVIALPRDVFLDACQADASVMTELARLMILRTRQAASRGPMGEPSVFGFTPVGQPGALRPTVE
RLEREIGRLGYSVTTVGVEAASAPTEWFSEVERAHDFVLYVAEADDGGWRHVVARQVDRLFRVGRGDRRPPRGDPAGLVA
SPLEAQQLVDLILLQPAGTLRPRGSEAWLDAIGATRLFHLRRSTDEDVRRLARVLTGQSVGLVLSGGGARAYAHVGAIRA
LREHGAPIDFVGGVSMGAIIAAGVAMGWDDAEMDRRIREAFVDTSPLDDIAFPILAMTHGLKVSERLAQHFGDVQISDLW
LPFFCVSSNLTTGAYHLHRRGLLRKALRASIALPGVLPPATDGADVLVDGAVMKNFPADVMRAGQLGPIVGVDVTTARSI
TADDVARPASVWRWFRTGEWRNGPPIVSLLMRTATVSTGRDLAAAREATDVLVLPEVAGIEIRDWKAYDRAVEAGYQATR
DALSKLTRPVTELRRRASLAEEAERARLAPFGGARTAAAE

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=662, Percent_Identity=27.6435045317221, Blast_Score=203, Evalue=5e-52,
Organism=Homo sapiens, GI116256487, Length=662, Percent_Identity=27.6435045317221, Blast_Score=203, Evalue=5e-52,
Organism=Homo sapiens, GI260656037, Length=662, Percent_Identity=27.6435045317221, Blast_Score=202, Evalue=6e-52,
Organism=Homo sapiens, GI260656043, Length=661, Percent_Identity=27.3827534039334, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI260656039, Length=661, Percent_Identity=27.3827534039334, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI148727290, Length=608, Percent_Identity=27.1381578947368, Blast_Score=189, Evalue=8e-48,
Organism=Homo sapiens, GI148727335, Length=608, Percent_Identity=27.1381578947368, Blast_Score=189, Evalue=8e-48,
Organism=Escherichia coli, GI226510936, Length=187, Percent_Identity=29.4117647058824, Blast_Score=86, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI193204778, Length=644, Percent_Identity=25.3105590062112, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI71997289, Length=659, Percent_Identity=26.5553869499241, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI71997299, Length=659, Percent_Identity=26.5553869499241, Blast_Score=147, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6323581, Length=280, Percent_Identity=30.7142857142857, Blast_Score=146, Evalue=7e-36,
Organism=Drosophila melanogaster, GI28571388, Length=625, Percent_Identity=25.76, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI281376913, Length=625, Percent_Identity=25.92, Blast_Score=184, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001423
- InterPro:   IPR002641
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00027 cNMP_binding; PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 64720; Mature: 64720

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPEIPADSALARLFRQERAREAAIWFSLPGGQTLYAAGDPADQLFILRAGRLGAFRREA
CCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCEEEEEECCCCCHHHHHC
GQEPQFLGVIRPGEPAGEMALVAGVPHSADVVALRDSEVIALPRDVFLDACQADASVMTE
CCCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCEEECCHHHHHHHHHCCHHHHHH
LARLMILRTRQAASRGPMGEPSVFGFTPVGQPGALRPTVERLEREIGRLGYSVTTVGVEA
HHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCC
ASAPTEWFSEVERAHDFVLYVAEADDGGWRHVVARQVDRLFRVGRGDRRPPRGDPAGLVA
CCCCHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SPLEAQQLVDLILLQPAGTLRPRGSEAWLDAIGATRLFHLRRSTDEDVRRLARVLTGQSV
CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
GLVLSGGGARAYAHVGAIRALREHGAPIDFVGGVSMGAIIAAGVAMGWDDAEMDRRIREA
EEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHH
FVDTSPLDDIAFPILAMTHGLKVSERLAQHFGDVQISDLWLPFFCVSSNLTTGAYHLHRR
HCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHEEEEHHEECCCCCCHHHHHHHH
GLLRKALRASIALPGVLPPATDGADVLVDGAVMKNFPADVMRAGQLGPIVGVDVTTARSI
HHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHCCCHHHHHCCCCCCEEECCCCCCCCC
TADDVARPASVWRWFRTGEWRNGPPIVSLLMRTATVSTGRDLAAAREATDVLVLPEVAGI
CHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCCC
EIRDWKAYDRAVEAGYQATRDALSKLTRPVTELRRRASLAEEAERARLAPFGGARTAAAE
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLPEIPADSALARLFRQERAREAAIWFSLPGGQTLYAAGDPADQLFILRAGRLGAFRREA
CCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCEEEEEECCCCCHHHHHC
GQEPQFLGVIRPGEPAGEMALVAGVPHSADVVALRDSEVIALPRDVFLDACQADASVMTE
CCCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCEEECCHHHHHHHHHCCHHHHHH
LARLMILRTRQAASRGPMGEPSVFGFTPVGQPGALRPTVERLEREIGRLGYSVTTVGVEA
HHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCC
ASAPTEWFSEVERAHDFVLYVAEADDGGWRHVVARQVDRLFRVGRGDRRPPRGDPAGLVA
CCCCHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SPLEAQQLVDLILLQPAGTLRPRGSEAWLDAIGATRLFHLRRSTDEDVRRLARVLTGQSV
CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
GLVLSGGGARAYAHVGAIRALREHGAPIDFVGGVSMGAIIAAGVAMGWDDAEMDRRIREA
EEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHH
FVDTSPLDDIAFPILAMTHGLKVSERLAQHFGDVQISDLWLPFFCVSSNLTTGAYHLHRR
HCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHEEEEHHEECCCCCCHHHHHHHH
GLLRKALRASIALPGVLPPATDGADVLVDGAVMKNFPADVMRAGQLGPIVGVDVTTARSI
HHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHCCCHHHHHCCCCCCEEECCCCCCCCC
TADDVARPASVWRWFRTGEWRNGPPIVSLLMRTATVSTGRDLAAAREATDVLVLPEVAGI
CHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCCC
EIRDWKAYDRAVEAGYQATRDALSKLTRPVTELRRRASLAEEAERARLAPFGGARTAAAE
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]