Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is exsH [H]

Identifier: 197104757

GI number: 197104757

Start: 1468039

End: 1470360

Strand: Reverse

Name: exsH [H]

Synonym: PHZ_c1291

Alternate gene names: 197104757

Gene position: 1470360-1468039 (Counterclockwise)

Preceding gene: 197104758

Following gene: 197104754

Centisome position: 36.79

GC content: 70.03

Gene sequence:

>2322_bases
ATGTCGCTTTTCAAGTACGACGGCTCGGCCGCCGCGCAGACGCTCGCGCCCGCCGCCGACTTCTTCGGCTCGAACGCCGC
GGAAACCATCACCGGCACGGCTGGCCGGGATTCGCTGTGGCTGGGCCAGGGCGACAAGGGCGCCGGGGGCGCCGGCGACG
ACACCTACTACCTGCAGGGACATAACACGACGATCGTCGAGGCCGCCGGCGGCGGCGTGGACAGGATCGTCGCCTGGTCG
AGCGTCAAGCTGGCCGACCACCCGCACATCGAGAACCTGACCGTCGGCAACGACGGCATCTACGGCGCGGGCAACGCACT
GGACAACATCATCGAGGGCCAGGGCGGCTCGCAGCAGATCTACGGCGGCTTCGGCCAGGACATCCTGATCGGCGGCGCCG
GCGCCGACGTCTTCGTCGTGGTGAAGGGCGAAGGCAACGACGTCATCCAGGACTTCAACGTCGGCGAGGACAAGCTGCGC
CTCAAGGCCGGCCTCTCCAGCTTCGAGCAGGTCAAGGCCCGCATGAGCCAGGACGGCGCGGACGTGAAGCTGGACCTGGG
CGGCGGCGACGGCCTCGTGTTCCGGGGCGTCACGGTCGGACAGTTCACCGCCGCCAACTTCCAGCTCGAGCTGGACGCCT
CCACCCTCGGCGCCAAGACCTTCGGCGACGAGTTCTCCGGCCCGCTGTCGCTCTGGGACGCCCAGAGCAACCCGACGGGC
CTGTGGCGGCCGGACTTCGGCTACCAGGGGGAACAGGGCACGGGCTCGTACACCCTGATCAGCAACGACGAGAAGCAGAT
CTACACCTCGCCGTACTTCCGCGGCCACGATGGCGATTTCGCCGAGAGCCCGTTCGTGAACAACGCCGACGGCACCCTGT
CGATCTGGGCCAAGCCCAGCACCAACGGCGAGATCTTCGGCTACGGCTACACCTCGGGGATGATCACCACGAAGGAGACC
TTCAGCCAGACCTACGGCTACTTCGAGATGCGGGCCGACATCCCCAGCGCGGCGGGCGCCTGGCCGGCCTTCTGGCTGAT
CCCGGCCGACGGCTCCTGGCCGCCCGAGCTGGACGTGATGGAGACCCTGACGTCCGATCCCAACGGCCTGTGGACGACCC
AGCACTCGAGCCTGGGCGGCCACTCCGCCGACGGCCAGCTCTCGTACGTTCCCGACACCGCCGACGGCTTCCACACCTAC
GGGGCCATGTGGACCCCCACCGAGATCGTCTGGTACCTCGACAACGTCGAAGTGTTCCGCTCGGCGACCCCGGCCGACAT
GAACAAGCCCATGTTCATGATCGCCAACCTGGCCCTCGGCGGCTGGGGCGGGGCCATCGACGGCGCGGCGCTGCCGGCCG
AGTTCAAGATCGACTACATCCGCGCCTATGCGCTGGGCGACGGCACGGGCAGCCAACCCCCCGTCGAGCCGCCGGCTTCC
ACGCCTCCGACGTCCACGCCGCCGACCGGCGAGATTCCGGTCCCGCCCGCCTCCGGCGACGGGGTCACCCTGACCTCGCA
GGCGTTCGGCGACGTGATGACCGGCGGCGCCGGCGCCGACACGCTCACGGCCGGCAACGGCGGCGAGCTGATGACCGGCG
GTGCGGGCGGCGACGTCTTCGTCTTCAAGACCTTCCCCTGGTCGCCGACCGAGATCCAGGACTTCCAGGTCGGCGTGGAC
AAGCTGGACCTGTCGGCCCTGATGGACGGCTACAGCGGCGCCGATCCCGTCGCCGACGGCCGGCTGTGGCTGTTCGACGA
CGGTGCAGGCGGGACCAAGGTCTGCGTCGATCCCGACGGCTTCGGCGGCGAGTGGCCCCTCTACGTCGCGCACCTCATGG
GCGTGCCGGCCGAAGGGCTGACGGCGGACGCTCTGCTGGGCTCGGGCGAAGCGCCTGCGGCCGAGGCTCCCGCGCCGGCC
GCGCCGGGCGTGGAGCTGGTCTCCGACCGGTGGGGCGCCGAGCTGACCGGCGGCGACGGGGCCGACACCCTGAACGCCGG
CTACGGCCCCGACGTCATGACCGGCGGCGCCGGAGCAGACCGCTTCGTGTTCGACAACCTGCCCTGGAACGCCTCCAAGG
TGACCGACTTCGAGGCCGGCGTGGACAAGCTGGACGTGAGCGGCCTGCTCGACGCGGCCGGCTACACAGGCTCGAACCCC
GTCGCCGACGGCTACGTGAAGCTGATCGACAACGGCCAGGGCGACACCTGGGTCTACTTCGACACCGACGGCGCCGCCGC
GGGCGACCAGTGGGGGACCTTCGTGACCACGCTGGAGAAGGTCTCGGCCGCCGAGGTGAAGGCCACGGACTGGATCATCT
AG

Upstream 100 bases:

>100_bases
CGTCTTCCCTTCCACTTTCCCGGTGCTGCGACGCGGACGGGCTTCGCAGACGACGGCGGCGTCGGGGCCGCCACAACACT
TCGGACGGGAAGACCTACTG

Downstream 100 bases:

>100_bases
GACGAGATCACGCCGGCGTCCCTCCCGTCCGAGGGAGGCCGGCGCTGAGCGGCGGGACCGGCCGGCCGGTCCTGACGCGA
AGGGCCCTCTCCGACGGGAG

Product: endo-1,3-1,4-beta-glycanase, C-terminal secretion signal protein

Products: NA

Alternate protein names: Succinoglycan biosynthesis protein exsH [H]

Number of amino acids: Translated: 773; Mature: 772

Protein sequence:

>773_residues
MSLFKYDGSAAAQTLAPAADFFGSNAAETITGTAGRDSLWLGQGDKGAGGAGDDTYYLQGHNTTIVEAAGGGVDRIVAWS
SVKLADHPHIENLTVGNDGIYGAGNALDNIIEGQGGSQQIYGGFGQDILIGGAGADVFVVVKGEGNDVIQDFNVGEDKLR
LKAGLSSFEQVKARMSQDGADVKLDLGGGDGLVFRGVTVGQFTAANFQLELDASTLGAKTFGDEFSGPLSLWDAQSNPTG
LWRPDFGYQGEQGTGSYTLISNDEKQIYTSPYFRGHDGDFAESPFVNNADGTLSIWAKPSTNGEIFGYGYTSGMITTKET
FSQTYGYFEMRADIPSAAGAWPAFWLIPADGSWPPELDVMETLTSDPNGLWTTQHSSLGGHSADGQLSYVPDTADGFHTY
GAMWTPTEIVWYLDNVEVFRSATPADMNKPMFMIANLALGGWGGAIDGAALPAEFKIDYIRAYALGDGTGSQPPVEPPAS
TPPTSTPPTGEIPVPPASGDGVTLTSQAFGDVMTGGAGADTLTAGNGGELMTGGAGGDVFVFKTFPWSPTEIQDFQVGVD
KLDLSALMDGYSGADPVADGRLWLFDDGAGGTKVCVDPDGFGGEWPLYVAHLMGVPAEGLTADALLGSGEAPAAEAPAPA
APGVELVSDRWGAELTGGDGADTLNAGYGPDVMTGGAGADRFVFDNLPWNASKVTDFEAGVDKLDVSGLLDAAGYTGSNP
VADGYVKLIDNGQGDTWVYFDTDGAAAGDQWGTFVTTLEKVSAAEVKATDWII

Sequences:

>Translated_773_residues
MSLFKYDGSAAAQTLAPAADFFGSNAAETITGTAGRDSLWLGQGDKGAGGAGDDTYYLQGHNTTIVEAAGGGVDRIVAWS
SVKLADHPHIENLTVGNDGIYGAGNALDNIIEGQGGSQQIYGGFGQDILIGGAGADVFVVVKGEGNDVIQDFNVGEDKLR
LKAGLSSFEQVKARMSQDGADVKLDLGGGDGLVFRGVTVGQFTAANFQLELDASTLGAKTFGDEFSGPLSLWDAQSNPTG
LWRPDFGYQGEQGTGSYTLISNDEKQIYTSPYFRGHDGDFAESPFVNNADGTLSIWAKPSTNGEIFGYGYTSGMITTKET
FSQTYGYFEMRADIPSAAGAWPAFWLIPADGSWPPELDVMETLTSDPNGLWTTQHSSLGGHSADGQLSYVPDTADGFHTY
GAMWTPTEIVWYLDNVEVFRSATPADMNKPMFMIANLALGGWGGAIDGAALPAEFKIDYIRAYALGDGTGSQPPVEPPAS
TPPTSTPPTGEIPVPPASGDGVTLTSQAFGDVMTGGAGADTLTAGNGGELMTGGAGGDVFVFKTFPWSPTEIQDFQVGVD
KLDLSALMDGYSGADPVADGRLWLFDDGAGGTKVCVDPDGFGGEWPLYVAHLMGVPAEGLTADALLGSGEAPAAEAPAPA
APGVELVSDRWGAELTGGDGADTLNAGYGPDVMTGGAGADRFVFDNLPWNASKVTDFEAGVDKLDVSGLLDAAGYTGSNP
VADGYVKLIDNGQGDTWVYFDTDGAAAGDQWGTFVTTLEKVSAAEVKATDWII
>Mature_772_residues
SLFKYDGSAAAQTLAPAADFFGSNAAETITGTAGRDSLWLGQGDKGAGGAGDDTYYLQGHNTTIVEAAGGGVDRIVAWSS
VKLADHPHIENLTVGNDGIYGAGNALDNIIEGQGGSQQIYGGFGQDILIGGAGADVFVVVKGEGNDVIQDFNVGEDKLRL
KAGLSSFEQVKARMSQDGADVKLDLGGGDGLVFRGVTVGQFTAANFQLELDASTLGAKTFGDEFSGPLSLWDAQSNPTGL
WRPDFGYQGEQGTGSYTLISNDEKQIYTSPYFRGHDGDFAESPFVNNADGTLSIWAKPSTNGEIFGYGYTSGMITTKETF
SQTYGYFEMRADIPSAAGAWPAFWLIPADGSWPPELDVMETLTSDPNGLWTTQHSSLGGHSADGQLSYVPDTADGFHTYG
AMWTPTEIVWYLDNVEVFRSATPADMNKPMFMIANLALGGWGGAIDGAALPAEFKIDYIRAYALGDGTGSQPPVEPPAST
PPTSTPPTGEIPVPPASGDGVTLTSQAFGDVMTGGAGADTLTAGNGGELMTGGAGGDVFVFKTFPWSPTEIQDFQVGVDK
LDLSALMDGYSGADPVADGRLWLFDDGAGGTKVCVDPDGFGGEWPLYVAHLMGVPAEGLTADALLGSGEAPAAEAPAPAA
PGVELVSDRWGAELTGGDGADTLNAGYGPDVMTGGAGADRFVFDNLPWNASKVTDFEAGVDKLDVSGLLDAAGYTGSNPV
ADGYVKLIDNGQGDTWVYFDTDGAAAGDQWGTFVTTLEKVSAAEVKATDWII

Specific function: Cleaves high molecular weight succinoglycan to yield LMW succinoglycan. Dynamically regulate the molecular weight distribution of succinoglycan by cleaving nascent succinoglycan only during a limited period after its synthesis, perhaps before it undergoes

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Secreted. Note=Probably by a type-III secretion system [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 hemolysin-type calcium-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR011049 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: NA

Molecular weight: Translated: 80270; Mature: 80138

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFKYDGSAAAQTLAPAADFFGSNAAETITGTAGRDSLWLGQGDKGAGGAGDDTYYLQG
CCEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCEEEEEC
HNTTIVEAAGGGVDRIVAWSSVKLADHPHIENLTVGNDGIYGAGNALDNIIEGQGGSQQI
CCEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEECCCCCEECCHHHHHHHCCCCCCCEE
YGGFGQDILIGGAGADVFVVVKGEGNDVIQDFNVGEDKLRLKAGLSSFEQVKARMSQDGA
CCCCCCEEEEECCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCC
DVKLDLGGGDGLVFRGVTVGQFTAANFQLELDASTLGAKTFGDEFSGPLSLWDAQSNPTG
EEEEEECCCCEEEEECEEECEEEEEEEEEEECHHHCCCCCCCCCCCCCEEEEECCCCCCC
LWRPDFGYQGEQGTGSYTLISNDEKQIYTSPYFRGHDGDFAESPFVNNADGTLSIWAKPS
CCCCCCCCCCCCCCCCEEEEECCCCEEEECCCEECCCCCCCCCCCCCCCCCEEEEEECCC
TNGEIFGYGYTSGMITTKETFSQTYGYFEMRADIPSAAGAWPAFWLIPADGSWPPELDVM
CCCCEEEEEECCCEEEEHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHH
ETLTSDPNGLWTTQHSSLGGHSADGQLSYVPDTADGFHTYGAMWTPTEIVWYLDNVEVFR
HHHCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCHHHCCCEECCCEEEEEECCCHHHH
SATPADMNKPMFMIANLALGGWGGAIDGAALPAEFKIDYIRAYALGDGTGSQPPVEPPAS
CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCC
TPPTSTPPTGEIPVPPASGDGVTLTSQAFGDVMTGGAGADTLTAGNGGELMTGGAGGDVF
CCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCEE
VFKTFPWSPTEIQDFQVGVDKLDLSALMDGYSGADPVADGRLWLFDDGAGGTKVCVDPDG
EEEECCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCCC
FGGEWPLYVAHLMGVPAEGLTADALLGSGEAPAAEAPAPAAPGVELVSDRWGAELTGGDG
CCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCEECCCCC
ADTLNAGYGPDVMTGGAGADRFVFDNLPWNASKVTDFEAGVDKLDVSGLLDAAGYTGSNP
CCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCCC
VADGYVKLIDNGQGDTWVYFDTDGAAAGDQWGTFVTTLEKVSAAEVKATDWII
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure 
SLFKYDGSAAAQTLAPAADFFGSNAAETITGTAGRDSLWLGQGDKGAGGAGDDTYYLQG
CEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCEEEEEC
HNTTIVEAAGGGVDRIVAWSSVKLADHPHIENLTVGNDGIYGAGNALDNIIEGQGGSQQI
CCEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEECCCCCEECCHHHHHHHCCCCCCCEE
YGGFGQDILIGGAGADVFVVVKGEGNDVIQDFNVGEDKLRLKAGLSSFEQVKARMSQDGA
CCCCCCEEEEECCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCC
DVKLDLGGGDGLVFRGVTVGQFTAANFQLELDASTLGAKTFGDEFSGPLSLWDAQSNPTG
EEEEEECCCCEEEEECEEECEEEEEEEEEEECHHHCCCCCCCCCCCCCEEEEECCCCCCC
LWRPDFGYQGEQGTGSYTLISNDEKQIYTSPYFRGHDGDFAESPFVNNADGTLSIWAKPS
CCCCCCCCCCCCCCCCEEEEECCCCEEEECCCEECCCCCCCCCCCCCCCCCEEEEEECCC
TNGEIFGYGYTSGMITTKETFSQTYGYFEMRADIPSAAGAWPAFWLIPADGSWPPELDVM
CCCCEEEEEECCCEEEEHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHH
ETLTSDPNGLWTTQHSSLGGHSADGQLSYVPDTADGFHTYGAMWTPTEIVWYLDNVEVFR
HHHCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCHHHCCCEECCCEEEEEECCCHHHH
SATPADMNKPMFMIANLALGGWGGAIDGAALPAEFKIDYIRAYALGDGTGSQPPVEPPAS
CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCC
TPPTSTPPTGEIPVPPASGDGVTLTSQAFGDVMTGGAGADTLTAGNGGELMTGGAGGDVF
CCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCEE
VFKTFPWSPTEIQDFQVGVDKLDLSALMDGYSGADPVADGRLWLFDDGAGGTKVCVDPDG
EEEECCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCCC
FGGEWPLYVAHLMGVPAEGLTADALLGSGEAPAAEAPAPAAPGVELVSDRWGAELTGGDG
CCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCEECCCCC
ADTLNAGYGPDVMTGGAGADRFVFDNLPWNASKVTDFEAGVDKLDVSGLLDAAGYTGSNP
CCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCCC
VADGYVKLIDNGQGDTWVYFDTDGAAAGDQWGTFVTTLEKVSAAEVKATDWII
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11902715; 11481431; 9560202 [H]