| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104647
Identifier: 197104647
GI number: 197104647
Start: 1354884
End: 1356005
Strand: Reverse
Name: 197104647
Synonym: PHZ_c1181
Alternate gene names: NA
Gene position: 1356005-1354884 (Counterclockwise)
Preceding gene: 197104649
Following gene: 197104646
Centisome position: 33.93
GC content: 73.26
Gene sequence:
>1122_bases TTGAGCCTCGCCGTGAGCAGCGAAAGCCTGCTCGATCTCGCCAAGAGCCGCGCGCCCGCGGACCGTGAACGCCTGCTGCT GGCGATCGCGGACCTATGCGACACGCCGCACGCGGGCGAGGCGATGAAGGCCCCGCAGATCCAGGCCCTCCTCAGCTCCA TCTTCATGAGCCTGGTGGTCGAGGCCGAACGCGACATCCGCAAGCGCCTGGCCGAGCAGCTCGCCGGCGCCGACTGGGCG CCGCCCGCGCTCATCAACGTGCTGGCCCTGGACGACATCGAGATCGCCCGGCCGGTGATCGCCCAAAGCCCCCTGCTCCG CGACGTGGACCTCGTCCGCCTCCTCGTGGAAGCCACCATCGAGCATCAGATCGAGATCGCCCGGCGGCCGAAGCTGTCGC AGAACGTCGTCTCGGCCATCCTCCACCAGGCCGAGCCCGCGGTGCTGACCGCGCTCGCCGGCAACGAGACCGCCGAGCTG TCGCCGCGGGACATGGCCGAGCTGGTCGAGATGTCGCGCCAGATCGCGGCGCTGCGTACACCGCTCTCGCGGCACCCGCG CCTGACCAGCGACCTGGCCGAGCGGCTGTACGTCTGGGTCGGCCAGGCCCTGCGCAAGTCGCTCACCGACCGCTTCCGCC TCGACGCTCCCGCCCTCGACAAGGCGATCGCCGCCGCCGTCACCGAGGTGCACGCGGGAACGCCTCGCGACGGGCAGGCC ATGGTCGTGCTGGCCCGCGACGGCGAGCGCGAGGAGATGGAGCGGCGGCTGATCGACAAGCTGCACGCCGCCGGACAGCT CCGCCCCGGCTACCTGGTCCGTGCCCTGCGTGAGGGCCGGCTGACGCTGTTCACGACGGCGCTCGCCATGCTGGGCCGCT TCGACGCCGACCACGTCCGGCGCGCGATCGATTCCGACCGGCCCGAGCTGCTGGGCCTGGCCTGCGCCGCCGTCGGCATC GACCGCAGCGTCTTCCCCACCATCCTGCAGCTCGTGCGCGACCTCAACGAGGGCCGCCCCGGCGGCGGGCAGGAGGCCGC CCGCCGCGCGGCCGGCGCGTTCGCGCCCGTCACGCCCAGCGTGGCCGGCGCCGCGTTCCGGCAGGCGGCCAAGTCGCTCT AG
Upstream 100 bases:
>100_bases GCCCGTTCTGCGCGCGGGCAGGCTCCTTAAGCATGTTTTCATCCGCGCCCTACAGGATGGCTTACAGCCGCGTTCGGTTT GGGCAAATGGGGGACCCGGC
Downstream 100 bases:
>100_bases ACGCGATCGCGCGTCGCCTTTCCCCGAACCGGCTCTGGACAGACGCGCCGGGTTGCGGCGTGTTGCCGGCCGATGTTCAA GCCCGAGCCCTTCGTCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MSLAVSSESLLDLAKSRAPADRERLLLAIADLCDTPHAGEAMKAPQIQALLSSIFMSLVVEAERDIRKRLAEQLAGADWA PPALINVLALDDIEIARPVIAQSPLLRDVDLVRLLVEATIEHQIEIARRPKLSQNVVSAILHQAEPAVLTALAGNETAEL SPRDMAELVEMSRQIAALRTPLSRHPRLTSDLAERLYVWVGQALRKSLTDRFRLDAPALDKAIAAAVTEVHAGTPRDGQA MVVLARDGEREEMERRLIDKLHAAGQLRPGYLVRALREGRLTLFTTALAMLGRFDADHVRRAIDSDRPELLGLACAAVGI DRSVFPTILQLVRDLNEGRPGGGQEAARRAAGAFAPVTPSVAGAAFRQAAKSL
Sequences:
>Translated_373_residues MSLAVSSESLLDLAKSRAPADRERLLLAIADLCDTPHAGEAMKAPQIQALLSSIFMSLVVEAERDIRKRLAEQLAGADWA PPALINVLALDDIEIARPVIAQSPLLRDVDLVRLLVEATIEHQIEIARRPKLSQNVVSAILHQAEPAVLTALAGNETAEL SPRDMAELVEMSRQIAALRTPLSRHPRLTSDLAERLYVWVGQALRKSLTDRFRLDAPALDKAIAAAVTEVHAGTPRDGQA MVVLARDGEREEMERRLIDKLHAAGQLRPGYLVRALREGRLTLFTTALAMLGRFDADHVRRAIDSDRPELLGLACAAVGI DRSVFPTILQLVRDLNEGRPGGGQEAARRAAGAFAPVTPSVAGAAFRQAAKSL >Mature_372_residues SLAVSSESLLDLAKSRAPADRERLLLAIADLCDTPHAGEAMKAPQIQALLSSIFMSLVVEAERDIRKRLAEQLAGADWAP PALINVLALDDIEIARPVIAQSPLLRDVDLVRLLVEATIEHQIEIARRPKLSQNVVSAILHQAEPAVLTALAGNETAELS PRDMAELVEMSRQIAALRTPLSRHPRLTSDLAERLYVWVGQALRKSLTDRFRLDAPALDKAIAAAVTEVHAGTPRDGQAM VVLARDGEREEMERRLIDKLHAAGQLRPGYLVRALREGRLTLFTTALAMLGRFDADHVRRAIDSDRPELLGLACAAVGID RSVFPTILQLVRDLNEGRPGGGQEAARRAAGAFAPVTPSVAGAAFRQAAKSL
Specific function: Unknown
COG id: COG5330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40423; Mature: 40292
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAVSSESLLDLAKSRAPADRERLLLAIADLCDTPHAGEAMKAPQIQALLSSIFMSLVV CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH EAERDIRKRLAEQLAGADWAPPALINVLALDDIEIARPVIAQSPLLRDVDLVRLLVEATI HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH EHQIEIARRPKLSQNVVSAILHQAEPAVLTALAGNETAELSPRDMAELVEMSRQIAALRT HHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC PLSRHPRLTSDLAERLYVWVGQALRKSLTDRFRLDAPALDKAIAAAVTEVHAGTPRDGQA CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCE MVVLARDGEREEMERRLIDKLHAAGQLRPGYLVRALREGRLTLFTTALAMLGRFDADHVR EEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH RAIDSDRPELLGLACAAVGIDRSVFPTILQLVRDLNEGRPGGGQEAARRAAGAFAPVTPS HHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCH VAGAAFRQAAKSL HHHHHHHHHHHCC >Mature Secondary Structure SLAVSSESLLDLAKSRAPADRERLLLAIADLCDTPHAGEAMKAPQIQALLSSIFMSLVV CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH EAERDIRKRLAEQLAGADWAPPALINVLALDDIEIARPVIAQSPLLRDVDLVRLLVEATI HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH EHQIEIARRPKLSQNVVSAILHQAEPAVLTALAGNETAELSPRDMAELVEMSRQIAALRT HHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC PLSRHPRLTSDLAERLYVWVGQALRKSLTDRFRLDAPALDKAIAAAVTEVHAGTPRDGQA CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCE MVVLARDGEREEMERRLIDKLHAAGQLRPGYLVRALREGRLTLFTTALAMLGRFDADHVR EEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH RAIDSDRPELLGLACAAVGIDRSVFPTILQLVRDLNEGRPGGGQEAARRAAGAFAPVTPS HHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCH VAGAAFRQAAKSL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA