Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is ppnK [H]

Identifier: 197104646

GI number: 197104646

Start: 1354029

End: 1354811

Strand: Reverse

Name: ppnK [H]

Synonym: PHZ_c1180

Alternate gene names: 197104646

Gene position: 1354811-1354029 (Counterclockwise)

Preceding gene: 197104647

Following gene: 197104645

Centisome position: 33.9

GC content: 69.35

Gene sequence:

>783_bases
ATGTTCAAGCCCGAGCCCTTCGTCACGCGCCTGACCTTCGCCGCCAGCGACCGCCCGGAAGCCCAGGAGGCCCGTGCGCG
CCTCGCCCAGCGCTACGGCGACGCCGGGGAGGAGAAGGCCCAGGTGATCGTCGCCCTCGGGGGCGACGGCTTCATGCTGG
AGACCGTCCACAGGCACATGGGGTCCGGCAAGCCGATCTACGGCATGAACCGCGGGTCGGTCGGCTTCCTGATGAACGAG
TACAGCGAGGACGCCCTGCTCGAGCGGATCAACGCCGCCGAGCAGGCGGTCATCCATCCGCTGCGGATGACCGCCGTGGA
CGTCCACGGCGAGACCCATCGTGCGCTCGCCTTCAACGAGGTCTCGCTGCTGCGTCAGACCCGCCAGACGGCCAAGCTCC
GCATCTCGGTGGACGGCAAGGTGCGGCTGGGCGAGCTGCAGTGCGACGGGGTGCTGGTGGCCACGCCCGCGGGTTCCACC
GCCTACAACCTTTCCGCGCATGGACCGATCATCCCGCTGGACGCCAAGATCCTGGCGCTGACGCCGATCAGCGCCTTCCG
GCCCCGGCGCTGGCGCGGCGCCCTGCTCGCCCACACGGCGGAAGTGACGTTCGAGGTTCTTGAGGCCGACAAGCGCCCCG
TGAGCGCCGTGGCCGACAATTTCGAGGTGCGGCACGTCGTCGAGGTCCGCGTCGGAGAGGATCGGGACGTGTCCATCACC
ATGCTCTTCGACGCCGGCCGCAGCCTGGAAGAGCGGGTCCTCGCCGAGCAGTTCTCGGTTTGA

Upstream 100 bases:

>100_bases
GTTCCGGCAGGCGGCCAAGTCGCTCTAGACGCGATCGCGCGTCGCCTTTCCCCGAACCGGCTCTGGACAGACGCGCCGGG
TTGCGGCGTGTTGCCGGCCG

Downstream 100 bases:

>100_bases
ACAGGCGGTCTGCCGCGGCTCAGGTGTTATTAACGGGTTGACCCTTAGGTTGCAGGCGCGTCCGCCAGGAGAGCCTCCCG
TGAGCGATCAGAAGTCCGGT

Product: inorganic polyphosphate/ATP-NAD kinase

Products: NA

Alternate protein names: Poly(P)/ATP NAD kinase [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MFKPEPFVTRLTFAASDRPEAQEARARLAQRYGDAGEEKAQVIVALGGDGFMLETVHRHMGSGKPIYGMNRGSVGFLMNE
YSEDALLERINAAEQAVIHPLRMTAVDVHGETHRALAFNEVSLLRQTRQTAKLRISVDGKVRLGELQCDGVLVATPAGST
AYNLSAHGPIIPLDAKILALTPISAFRPRRWRGALLAHTAEVTFEVLEADKRPVSAVADNFEVRHVVEVRVGEDRDVSIT
MLFDAGRSLEERVLAEQFSV

Sequences:

>Translated_260_residues
MFKPEPFVTRLTFAASDRPEAQEARARLAQRYGDAGEEKAQVIVALGGDGFMLETVHRHMGSGKPIYGMNRGSVGFLMNE
YSEDALLERINAAEQAVIHPLRMTAVDVHGETHRALAFNEVSLLRQTRQTAKLRISVDGKVRLGELQCDGVLVATPAGST
AYNLSAHGPIIPLDAKILALTPISAFRPRRWRGALLAHTAEVTFEVLEADKRPVSAVADNFEVRHVVEVRVGEDRDVSIT
MLFDAGRSLEERVLAEQFSV
>Mature_260_residues
MFKPEPFVTRLTFAASDRPEAQEARARLAQRYGDAGEEKAQVIVALGGDGFMLETVHRHMGSGKPIYGMNRGSVGFLMNE
YSEDALLERINAAEQAVIHPLRMTAVDVHGETHRALAFNEVSLLRQTRQTAKLRISVDGKVRLGELQCDGVLVATPAGST
AYNLSAHGPIIPLDAKILALTPISAFRPRRWRGALLAHTAEVTFEVLEADKRPVSAVADNFEVRHVVEVRVGEDRDVSIT
MLFDAGRSLEERVLAEQFSV

Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]

COG id: COG0061

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD kinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016064
- InterPro:   IPR017438
- InterPro:   IPR017437
- InterPro:   IPR002504 [H]

Pfam domain/function: PF01513 NAD_kinase [H]

EC number: =2.7.1.23 [H]

Molecular weight: Translated: 28599; Mature: 28599

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPEPFVTRLTFAASDRPEAQEARARLAQRYGDAGEEKAQVIVALGGDGFMLETVHRHM
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHH
GSGKPIYGMNRGSVGFLMNEYSEDALLERINAAEQAVIHPLRMTAVDVHGETHRALAFNE
CCCCCEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEHHH
VSLLRQTRQTAKLRISVDGKVRLGELQCDGVLVATPAGSTAYNLSAHGPIIPLDAKILAL
HHHHHHHHHCEEEEEEECCEEEEEEEEECCEEEECCCCCCEEEECCCCCEEECCCEEEEE
TPISAFRPRRWRGALLAHTAEVTFEVLEADKRPVSAVADNFEVRHVVEVRVGEDRDVSIT
CCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEEECCCCCEEEE
MLFDAGRSLEERVLAEQFSV
EEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MFKPEPFVTRLTFAASDRPEAQEARARLAQRYGDAGEEKAQVIVALGGDGFMLETVHRHM
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHH
GSGKPIYGMNRGSVGFLMNEYSEDALLERINAAEQAVIHPLRMTAVDVHGETHRALAFNE
CCCCCEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEHHH
VSLLRQTRQTAKLRISVDGKVRLGELQCDGVLVATPAGSTAYNLSAHGPIIPLDAKILAL
HHHHHHHHHCEEEEEEECCEEEEEEEEECCEEEECCCCCCEEEECCCCCEEECCCEEEEE
TPISAFRPRRWRGALLAHTAEVTFEVLEADKRPVSAVADNFEVRHVVEVRVGEDRDVSIT
CCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEEECCCCCEEEE
MLFDAGRSLEERVLAEQFSV
EEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]