Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197104645

Identifier: 197104645

GI number: 197104645

Start: 1353464

End: 1353991

Strand: Reverse

Name: 197104645

Synonym: PHZ_c1179

Alternate gene names: NA

Gene position: 1353991-1353464 (Counterclockwise)

Preceding gene: 197104646

Following gene: 197104642

Centisome position: 33.88

GC content: 69.7

Gene sequence:

>528_bases
TTGACCCTTAGGTTGCAGGCGCGTCCGCCAGGAGAGCCTCCCGTGAGCGATCAGAAGTCCGGTCACCTGATCCAGCCGTC
CAACGCGCTGCGCCTGAAGGTCGGCGGCGGCCGCCTCGGCGCGATCGACGCCTCGGCCATCGCCAAGGCCGAGGCCGCGC
TGCAGAGCCTGTCCGGCAACTTCTCGCAATGGCTGAACGACGAGGTGGGCAAGCTGGAGGCCGCCCGCCAGGACGTCCGG
GCCAATGGCGTCGATCCCGACACCATGGAGCGCCTGTACCTGCGCGCCCACGACCTGAAGGGGCTCGGCGCGACCTATGG
GTTCCCGCTGGTCACCCGCATCGCCGGCCTGCTCTGCCGGCTGATCGACGACAAGGCCAAGCGCGTGGATGCGCCGATGC
CGCTGATCGACGCCCATATCGACGCGATCAAGGCCGCCGTCCGCGACGGCATCAAGGGCGAGGACCACCCTGTGGGCCAG
GCCCTGGTGAAGGAGCTGGAGTCCCGCGTGGCCCAACTCGGCGCCTAG

Upstream 100 bases:

>100_bases
ATGCTCTTCGACGCCGGCCGCAGCCTGGAAGAGCGGGTCCTCGCCGAGCAGTTCTCGGTTTGAACAGGCGGTCTGCCGCG
GCTCAGGTGTTATTAACGGG

Downstream 100 bases:

>100_bases
GCTCCGGCTACATCACCCGCTCGAGCGGCTCGGCCACCTCGCCGTAGCCGGCGTTCGGCGGCAGCACCAGCACGCGCCCT
TCCGGCCGGCTCTCCACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Histidine Phosphotransferase Domain-Containing Protein; Histidine Phosphotransferase Domain Protein; CheA-Like Signal Transduction Histidine Kinase; Hpt Domain-Containing Protein; Two-Component Sensor Protein; CheA Signal Transduction Histidine Kinase

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MTLRLQARPPGEPPVSDQKSGHLIQPSNALRLKVGGGRLGAIDASAIAKAEAALQSLSGNFSQWLNDEVGKLEAARQDVR
ANGVDPDTMERLYLRAHDLKGLGATYGFPLVTRIAGLLCRLIDDKAKRVDAPMPLIDAHIDAIKAAVRDGIKGEDHPVGQ
ALVKELESRVAQLGA

Sequences:

>Translated_175_residues
MTLRLQARPPGEPPVSDQKSGHLIQPSNALRLKVGGGRLGAIDASAIAKAEAALQSLSGNFSQWLNDEVGKLEAARQDVR
ANGVDPDTMERLYLRAHDLKGLGATYGFPLVTRIAGLLCRLIDDKAKRVDAPMPLIDAHIDAIKAAVRDGIKGEDHPVGQ
ALVKELESRVAQLGA
>Mature_174_residues
TLRLQARPPGEPPVSDQKSGHLIQPSNALRLKVGGGRLGAIDASAIAKAEAALQSLSGNFSQWLNDEVGKLEAARQDVRA
NGVDPDTMERLYLRAHDLKGLGATYGFPLVTRIAGLLCRLIDDKAKRVDAPMPLIDAHIDAIKAAVRDGIKGEDHPVGQA
LVKELESRVAQLGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18655; Mature: 18523

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRLQARPPGEPPVSDQKSGHLIQPSNALRLKVGGGRLGAIDASAIAKAEAALQSLSGN
CEEEECCCCCCCCCCCCCCCCCEECCCCCEEEEECCCEECCCCHHHHHHHHHHHHHHCCC
FSQWLNDEVGKLEAARQDVRANGVDPDTMERLYLRAHDLKGLGATYGFPLVTRIAGLLCR
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LIDDKAKRVDAPMPLIDAHIDAIKAAVRDGIKGEDHPVGQALVKELESRVAQLGA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLRLQARPPGEPPVSDQKSGHLIQPSNALRLKVGGGRLGAIDASAIAKAEAALQSLSGN
EEEECCCCCCCCCCCCCCCCCEECCCCCEEEEECCCEECCCCHHHHHHHHHHHHHHCCC
FSQWLNDEVGKLEAARQDVRANGVDPDTMERLYLRAHDLKGLGATYGFPLVTRIAGLLCR
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LIDDKAKRVDAPMPLIDAHIDAIKAAVRDGIKGEDHPVGQALVKELESRVAQLGA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA