| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104643
Identifier: 197104643
GI number: 197104643
Start: 1351494
End: 1352633
Strand: Direct
Name: 197104643
Synonym: PHZ_c1177
Alternate gene names: NA
Gene position: 1351494-1352633 (Clockwise)
Preceding gene: 197104640
Following gene: 197104644
Centisome position: 33.82
GC content: 74.12
Gene sequence:
>1140_bases ATGGCGACGACGCGTTCGGCGTTGACGGAGGGCGATATCCGAACGCTGCTCAAGGGCTCGACGCCCGACGAGCGCGCGGC CGCCGCCCGCAAGCTGTGCGCCGCCATCGACCGTGCGCCGCTCTCCGAAGCGGATCGCGACCTCGCCGCCGAGATCCTGC GCGTGATGGCCGCCGACGCCGCCGAGACGGTGCGCCGGGCGCTGGTGGAGACCCTCAAGGCCTCGCGCGTCGTGCCGCGC GACGTGGCGGTGAAGCTGGCCCGGGACGTCGAGAGCGTCTCGCTGCCGATGCTGGCCTTCTCGCCCGCGTTCACCGACGA GGACCTGGCCGAGATCGTCCGCCTGGGCGGGCCGGTGCGCCAGCTCGCCATCGCCAAGCGGCCGGTCCTGCCGCGCAGGG TGACGGACGCCCTGGCCGAGCACGGATCCGAGCGGGCCGTGTCCGCGGCCTGCGCCAACGACAACGCCGACTTCGCCGAG GCGGCGCTGCAGAAGATCATCGACCGGTTCGCCGAGTCCGAGCGGGTGCTGACGGCGGTGGCCTACCGCAGCGCGCTGCC GCTCAGCGTCACCGAACGGCTGGTGCGGATGGTGGGCGACCAGCTGCGCGACCACCTGATGAGCCGCCACGCCGTCTCGC CCGAGGCCGCACTGGAGATCGCCGTCGGCGCGGCCGAGCGGGCGACGATCGACCTCGTGGACCAGGCCGGCCGCGCGGCC GACATGAAGGCCTTCGTCGCCCACCTGCAGGCCGAGCGGCGGCTCACCGCCTCGCTGCTGCTGCGGGCCCTGGCTCACGG GCACATGACGTTCTTCGAGTGGGGCGTGGCCGAGCTGGCCGGCGTGCCGCACCACCGCACATGGCTGATGATCCACGACG CCGGGCCGCTGGGCCTGCGGGCGATCTACGAGCGGGCGGGCCTGCCGGCGCGCCTGTTCCCGGCCTTCCGCGCCGCGGTG GACGCCTTCCACGCCATGGAGTTCGACGGCGGCCCGCGCGACCGGGAACGGTTCCAGGAGCGGATGCTGCAGCGCTTCCT GACCCAGCCGCAGGCCGCCGCCCGCGAAGACGTGGACTACCTGCTGGAGCGGATGAGCCGCGCCGCCGGGCAGGTGCGTG ACGTGGCGGAAACCGCCTGA
Upstream 100 bases:
>100_bases CTTAATCCACAGATTCGGCCGGCAAGGTCTCATTAAGCTTAACCGCCGATAAATCGACTCGTGGGACTCCGGTCCCGCAA GCGGGGGGATCTGGCGCGGC
Downstream 100 bases:
>100_bases GCCGCTTGCCGGGCGCCGCGGCCGGGCCCAAGCTTGGCGCATGAGCCAAGCCGAAACCGCCGCCGAGATCCGCCCGGCCG CCACCATCCTCCTGCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MATTRSALTEGDIRTLLKGSTPDERAAAARKLCAAIDRAPLSEADRDLAAEILRVMAADAAETVRRALVETLKASRVVPR DVAVKLARDVESVSLPMLAFSPAFTDEDLAEIVRLGGPVRQLAIAKRPVLPRRVTDALAEHGSERAVSAACANDNADFAE AALQKIIDRFAESERVLTAVAYRSALPLSVTERLVRMVGDQLRDHLMSRHAVSPEAALEIAVGAAERATIDLVDQAGRAA DMKAFVAHLQAERRLTASLLLRALAHGHMTFFEWGVAELAGVPHHRTWLMIHDAGPLGLRAIYERAGLPARLFPAFRAAV DAFHAMEFDGGPRDRERFQERMLQRFLTQPQAAAREDVDYLLERMSRAAGQVRDVAETA
Sequences:
>Translated_379_residues MATTRSALTEGDIRTLLKGSTPDERAAAARKLCAAIDRAPLSEADRDLAAEILRVMAADAAETVRRALVETLKASRVVPR DVAVKLARDVESVSLPMLAFSPAFTDEDLAEIVRLGGPVRQLAIAKRPVLPRRVTDALAEHGSERAVSAACANDNADFAE AALQKIIDRFAESERVLTAVAYRSALPLSVTERLVRMVGDQLRDHLMSRHAVSPEAALEIAVGAAERATIDLVDQAGRAA DMKAFVAHLQAERRLTASLLLRALAHGHMTFFEWGVAELAGVPHHRTWLMIHDAGPLGLRAIYERAGLPARLFPAFRAAV DAFHAMEFDGGPRDRERFQERMLQRFLTQPQAAAREDVDYLLERMSRAAGQVRDVAETA >Mature_378_residues ATTRSALTEGDIRTLLKGSTPDERAAAARKLCAAIDRAPLSEADRDLAAEILRVMAADAAETVRRALVETLKASRVVPRD VAVKLARDVESVSLPMLAFSPAFTDEDLAEIVRLGGPVRQLAIAKRPVLPRRVTDALAEHGSERAVSAACANDNADFAEA ALQKIIDRFAESERVLTAVAYRSALPLSVTERLVRMVGDQLRDHLMSRHAVSPEAALEIAVGAAERATIDLVDQAGRAAD MKAFVAHLQAERRLTASLLLRALAHGHMTFFEWGVAELAGVPHHRTWLMIHDAGPLGLRAIYERAGLPARLFPAFRAAVD AFHAMEFDGGPRDRERFQERMLQRFLTQPQAAAREDVDYLLERMSRAAGQVRDVAETA
Specific function: Unknown
COG id: COG5330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41398; Mature: 41267
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTRSALTEGDIRTLLKGSTPDERAAAARKLCAAIDRAPLSEADRDLAAEILRVMAADA CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AETVRRALVETLKASRVVPRDVAVKLARDVESVSLPMLAFSPAFTDEDLAEIVRLGGPVR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHCCCHHH QLAIAKRPVLPRRVTDALAEHGSERAVSAACANDNADFAEAALQKIIDRFAESERVLTAV HHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AYRSALPLSVTERLVRMVGDQLRDHLMSRHAVSPEAALEIAVGAAERATIDLVDQAGRAA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCHH DMKAFVAHLQAERRLTASLLLRALAHGHMTFFEWGVAELAGVPHHRTWLMIHDAGPLGLR HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH AIYERAGLPARLFPAFRAAVDAFHAMEFDGGPRDRERFQERMLQRFLTQPQAAAREDVDY HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH LLERMSRAAGQVRDVAETA HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATTRSALTEGDIRTLLKGSTPDERAAAARKLCAAIDRAPLSEADRDLAAEILRVMAADA CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AETVRRALVETLKASRVVPRDVAVKLARDVESVSLPMLAFSPAFTDEDLAEIVRLGGPVR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHCCCHHH QLAIAKRPVLPRRVTDALAEHGSERAVSAACANDNADFAEAALQKIIDRFAESERVLTAV HHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AYRSALPLSVTERLVRMVGDQLRDHLMSRHAVSPEAALEIAVGAAERATIDLVDQAGRAA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCHH DMKAFVAHLQAERRLTASLLLRALAHGHMTFFEWGVAELAGVPHHRTWLMIHDAGPLGLR HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH AIYERAGLPARLFPAFRAAVDAFHAMEFDGGPRDRERFQERMLQRFLTQPQAAAREDVDY HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH LLERMSRAAGQVRDVAETA HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA