| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104640
Identifier: 197104640
GI number: 197104640
Start: 1346960
End: 1348300
Strand: Direct
Name: 197104640
Synonym: PHZ_c1174
Alternate gene names: NA
Gene position: 1346960-1348300 (Clockwise)
Preceding gene: 197104639
Following gene: 197104643
Centisome position: 33.71
GC content: 70.17
Gene sequence:
>1341_bases ATGACCCCCTTCTACAACCTGCTCGGCAACAACCTCGTCGCGAACGTCGTGAACTTCACGGTGTGGTTCGCGCTGACGTT CTGGGTCTACCTCGAGACCCGCTCGGTGTTCGCCACCGGCATGATCGCGGGCATCTACCTGGTGCTCACGGCGGCCTCCG GCATCTGGTTCGGCAGCCTCGTCGACCATCACCGCAAGAAGCTGGTGATGCTGGGCTCCAGCGTCGTCTCGATGGTCCTC TACGGCCTGTCGCTGGCGCTGCACGAGGCGGCGCCCGAGGGCAGCCTGCGCGACGTCTCGGGCGCGAGCCTGTGGCTGTT CATCTGGCTGGTGATGCTGGGCGTGATCGCCGGCAACATCCGCAGCATCGCCCTGCCCACCCTGGTGACCGCGCTGATCC CGGAGGACCGGCGCGATCGGGCCAACGGCCTCGTCGGCATGGTCACCGGCGTGGGCTTCCTGACCACCTCCGTGATCAGC GGCTTCCTCGTGGCCTGGGGCGGGATGCGCTACACGCTCGTGCTGGCGCTCGTCTTCACGGCGGCGGTCTTCCTGCACCT GGTGTTCGTGCGGGTCGACGAGCCGGCGCCCGCGGCCGCCGCCGGCGAGGCGGCCGCGCCCCGCCGCATCGACCTGGCGG GCACGCTGCGCGTGATCGGGGCGGTGCCGGGCCTGTTCGCCCTGATCTTCTTCGCCACGTTCAACAACTTCTTGGGCGGC ATCTTCATGGCGCTGATGGACGCCTACGGCCTGTCGCTGGTCTCGGTGCAGGCCTGGGGGCTTCTGTGGGGCGTGCTGTC GACGGCGTTCATCCTCGCCGGCGTGGTCATCGCCCGCACGGGCCTCGGCGCCAACCCGCTGCGCACCCTGCTGCTGGTCA ACCTGATCATGTGGAGCGTGTGCTGCGTGTTCACCCTGCAGCCCTCGATCTGGCTCCTGGCGGCCGGCTGCTTCGTCTGG ATGTTCCTGGGCCCCTACGCCGAGGCGGCCGAGCACACGACGCTGCAGAAGGTGGTGCCGTTCGAGCGGCAGGGGCGGGT GTTCGGCTTCGCCCAGTCGGTGGAGCAGGCGGCCTCGCCGCTGACCGCCTTCCTGATGGGGCCGCTGACCCAGTTCATCG TGATCCCGTTCATGACCACGGGCGCCGGGGCCGCGACGATCGGCGACTGGTTCGGCCGCGGCCCGGACCGGGGGATCGCC CTGGTGTTCACCCTGGCCGGCGTGGTGGGCGTGACCGCCACGGTCTTCGCCCTGAACTCCCGGTACTACCGCGAGCTCAG CGCCGCCTATCTGCGCGGCGCCGAGCTGGAGGCCCGGCCGGTCCCCAGCGAGGCGCGGTGA
Upstream 100 bases:
>100_bases GACAGCCGCGAGGGTTAGCGCCCGAGGCTAGCCGGCGCCGCGGGAGCGCCCATATCAGCGATACGCGGGGCCGGGCGGCT CCCTCCAGGGCCGCACGACA
Downstream 100 bases:
>100_bases CGGGCCCCTACGCCGCCGCGCCGGCCTGCAGCATGGCCTCGATCTGCGCCTCGCCGTAGCCCAGCTCGGCCAGGACCTCG CGGGTGTGCTGGCCCAGCGC
Product: multidrug resistance protein
Products: NA
Alternate protein names: Facilitator Transporter; Facilitator Family Transporter; Facilitator Superfamily Protein; Macrolide Efflux Protein
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTPFYNLLGNNLVANVVNFTVWFALTFWVYLETRSVFATGMIAGIYLVLTAASGIWFGSLVDHHRKKLVMLGSSVVSMVL YGLSLALHEAAPEGSLRDVSGASLWLFIWLVMLGVIAGNIRSIALPTLVTALIPEDRRDRANGLVGMVTGVGFLTTSVIS GFLVAWGGMRYTLVLALVFTAAVFLHLVFVRVDEPAPAAAAGEAAAPRRIDLAGTLRVIGAVPGLFALIFFATFNNFLGG IFMALMDAYGLSLVSVQAWGLLWGVLSTAFILAGVVIARTGLGANPLRTLLLVNLIMWSVCCVFTLQPSIWLLAAGCFVW MFLGPYAEAAEHTTLQKVVPFERQGRVFGFAQSVEQAASPLTAFLMGPLTQFIVIPFMTTGAGAATIGDWFGRGPDRGIA LVFTLAGVVGVTATVFALNSRYYRELSAAYLRGAELEARPVPSEAR
Sequences:
>Translated_446_residues MTPFYNLLGNNLVANVVNFTVWFALTFWVYLETRSVFATGMIAGIYLVLTAASGIWFGSLVDHHRKKLVMLGSSVVSMVL YGLSLALHEAAPEGSLRDVSGASLWLFIWLVMLGVIAGNIRSIALPTLVTALIPEDRRDRANGLVGMVTGVGFLTTSVIS GFLVAWGGMRYTLVLALVFTAAVFLHLVFVRVDEPAPAAAAGEAAAPRRIDLAGTLRVIGAVPGLFALIFFATFNNFLGG IFMALMDAYGLSLVSVQAWGLLWGVLSTAFILAGVVIARTGLGANPLRTLLLVNLIMWSVCCVFTLQPSIWLLAAGCFVW MFLGPYAEAAEHTTLQKVVPFERQGRVFGFAQSVEQAASPLTAFLMGPLTQFIVIPFMTTGAGAATIGDWFGRGPDRGIA LVFTLAGVVGVTATVFALNSRYYRELSAAYLRGAELEARPVPSEAR >Mature_445_residues TPFYNLLGNNLVANVVNFTVWFALTFWVYLETRSVFATGMIAGIYLVLTAASGIWFGSLVDHHRKKLVMLGSSVVSMVLY GLSLALHEAAPEGSLRDVSGASLWLFIWLVMLGVIAGNIRSIALPTLVTALIPEDRRDRANGLVGMVTGVGFLTTSVISG FLVAWGGMRYTLVLALVFTAAVFLHLVFVRVDEPAPAAAAGEAAAPRRIDLAGTLRVIGAVPGLFALIFFATFNNFLGGI FMALMDAYGLSLVSVQAWGLLWGVLSTAFILAGVVIARTGLGANPLRTLLLVNLIMWSVCCVFTLQPSIWLLAAGCFVWM FLGPYAEAAEHTTLQKVVPFERQGRVFGFAQSVEQAASPLTAFLMGPLTQFIVIPFMTTGAGAATIGDWFGRGPDRGIAL VFTLAGVVGVTATVFALNSRYYRELSAAYLRGAELEARPVPSEAR
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47800; Mature: 47669
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFYNLLGNNLVANVVNFTVWFALTFWVYLETRSVFATGMIAGIYLVLTAASGIWFGSL CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VDHHRKKLVMLGSSVVSMVLYGLSLALHEAAPEGSLRDVSGASLWLFIWLVMLGVIAGNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH RSIALPTLVTALIPEDRRDRANGLVGMVTGVGFLTTSVISGFLVAWGGMRYTLVLALVFT HHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AAVFLHLVFVRVDEPAPAAAAGEAAAPRRIDLAGTLRVIGAVPGLFALIFFATFNNFLGG HHHHHHHHHHEECCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFMALMDAYGLSLVSVQAWGLLWGVLSTAFILAGVVIARTGLGANPLRTLLLVNLIMWSV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH CCVFTLQPSIWLLAAGCFVWMFLGPYAEAAEHTTLQKVVPFERQGRVFGFAQSVEQAASP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH LTAFLMGPLTQFIVIPFMTTGAGAATIGDWFGRGPDRGIALVFTLAGVVGVTATVFALNS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RYYRELSAAYLRGAELEARPVPSEAR HHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TPFYNLLGNNLVANVVNFTVWFALTFWVYLETRSVFATGMIAGIYLVLTAASGIWFGSL CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VDHHRKKLVMLGSSVVSMVLYGLSLALHEAAPEGSLRDVSGASLWLFIWLVMLGVIAGNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH RSIALPTLVTALIPEDRRDRANGLVGMVTGVGFLTTSVISGFLVAWGGMRYTLVLALVFT HHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AAVFLHLVFVRVDEPAPAAAAGEAAAPRRIDLAGTLRVIGAVPGLFALIFFATFNNFLGG HHHHHHHHHHEECCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFMALMDAYGLSLVSVQAWGLLWGVLSTAFILAGVVIARTGLGANPLRTLLLVNLIMWSV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH CCVFTLQPSIWLLAAGCFVWMFLGPYAEAAEHTTLQKVVPFERQGRVFGFAQSVEQAASP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH LTAFLMGPLTQFIVIPFMTTGAGAATIGDWFGRGPDRGIALVFTLAGVVGVTATVFALNS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RYYRELSAAYLRGAELEARPVPSEAR HHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA