Click here to switch to the map view.

The map label for this gene is thiO/thiG [H]

Identifier: 197104636

GI number: 197104636

Start: 1343037

End: 1344077

Strand: Direct

Name: thiO/thiG [H]

Synonym: PHZ_c1170

Alternate gene names: 197104636

Gene position: 1343037-1344077 (Clockwise)

Preceding gene: 197104632

Following gene: 197104637

Centisome position: 33.61

GC content: 78.96

Gene sequence:

>1041_bases
ATGAGCGGACCGGTGGTGACCATTGCGGGGGCGGGCGCCCTGGGTCTCGGCGCGGCCCTGGCCCTGGCGGACGCCGGATG
CCGGGTGACCGTCTGCGATCCGGCGGCGCCGGCGGCCAACGCCTCGGGGGTGGCGGCGGGCATGATCGCCCCGGCCTTCG
AGGCCGTGCTCGACCCGCAGGCGCGACCGCACTTCGAGCTCCTGCTGGCGGCGCGCGACCTGTGGCCGGCCCTGGCCGAG
CGGGCCGGGGTGGAGCTGCGCCGCGACGGCGCCCTGGCCGCCGGGGACGAGGCCTGGCTCGAGGAGGTCGCGCGCGGCCT
CGCGGCCCTGGGGTTCAGGGCGATGGAGCTGCCGGGCTCGGCGGCGCGGGCGATGGCGCCGGGCCTGTCGGAAGACCTGC
CGCGCGCCCTGCTGACGCGCGAGGACTGGCGGATCGAGGCCGCCCAGGCCCTTGGCCGGTTGCGCGCCGCCGCCGAGGCC
GCGGGCGTCGCCTTCCGCGCCGAAGCCGTCCGCGAACGCGGCGGCGCCGATGTGCTGATGGTGGCGACCGGGGCGGGCGA
GGCGGATCTCGCGCCCGAGCTGTCCGTGCTCTCGCCGATCAAGGGGCACATCCTGCGCCTGGCGGCGCCCTGGGCGGCCG
GCGCCGTGGTGCGTGGCCAGGGCGCCTATGCGGCGCCCGGCGCGGGGACGATGACCGTCGGGGCGACCATGGAGGCGGGC
GTCGCCGACCCGGCGGTGGATCCGGCCAAGGGCGAGCCGCTTCGCGCCGTCGCGGCGCGGCTGTTCCCGGCGCTGGCCGA
GGCGCCCTCCACGCTGGCGGCCGGAATCCGGGCGGCGACGCCCGACGGCCTGCCGATGGTGGGCTGGAGCGAGGCGCCCG
GCGTGCTGCTGGCCGTGGGCGCGCGGCGCAACGGCTGGCTGCTCGCGCCGCTCGTGGCCCAGGTCGTCGCGGCCTGCGTG
ACGGGGCGCGATCCCGGCGCGTACGGTCCGCGCTTCGATCCGGCGCGCTTCAGGAAGCCGGGCCTTAGAGGGACGGCATG
A

Upstream 100 bases:

>100_bases
CAGGCTGGGGGCAGGCGTTGTCGGTTGAACCCGCGCGAACGGCCCAGGTTCCTCGGAACGCGGCCTTGATTTTCCGTTCG
CCGGCAGGTCGTTAGGGGCC

Downstream 100 bases:

>100_bases
ACGGTTTCTGGCTCACGGACGAGCAGCAGGCGATCCGCGACGGGGTCCTGCGCCTGTGCGAACGCTTCGACGCCGAGTAT
TGGCGCCGCACAGACGAGAC

Product: D-amino acid oxidase family protein

Products: NA

Alternate protein names: Probable FAD-dependent glycine oxidase; Thiazole synthase [H]

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MSGPVVTIAGAGALGLGAALALADAGCRVTVCDPAAPAANASGVAAGMIAPAFEAVLDPQARPHFELLLAARDLWPALAE
RAGVELRRDGALAAGDEAWLEEVARGLAALGFRAMELPGSAARAMAPGLSEDLPRALLTREDWRIEAAQALGRLRAAAEA
AGVAFRAEAVRERGGADVLMVATGAGEADLAPELSVLSPIKGHILRLAAPWAAGAVVRGQGAYAAPGAGTMTVGATMEAG
VADPAVDPAKGEPLRAVAARLFPALAEAPSTLAAGIRAATPDGLPMVGWSEAPGVLLAVGARRNGWLLAPLVAQVVAACV
TGRDPGAYGPRFDPARFRKPGLRGTA

Sequences:

>Translated_346_residues
MSGPVVTIAGAGALGLGAALALADAGCRVTVCDPAAPAANASGVAAGMIAPAFEAVLDPQARPHFELLLAARDLWPALAE
RAGVELRRDGALAAGDEAWLEEVARGLAALGFRAMELPGSAARAMAPGLSEDLPRALLTREDWRIEAAQALGRLRAAAEA
AGVAFRAEAVRERGGADVLMVATGAGEADLAPELSVLSPIKGHILRLAAPWAAGAVVRGQGAYAAPGAGTMTVGATMEAG
VADPAVDPAKGEPLRAVAARLFPALAEAPSTLAAGIRAATPDGLPMVGWSEAPGVLLAVGARRNGWLLAPLVAQVVAACV
TGRDPGAYGPRFDPARFRKPGLRGTA
>Mature_345_residues
SGPVVTIAGAGALGLGAALALADAGCRVTVCDPAAPAANASGVAAGMIAPAFEAVLDPQARPHFELLLAARDLWPALAER
AGVELRRDGALAAGDEAWLEEVARGLAALGFRAMELPGSAARAMAPGLSEDLPRALLTREDWRIEAAQALGRLRAAAEAA
GVAFRAEAVRERGGADVLMVATGAGEADLAPELSVLSPIKGHILRLAAPWAAGAVVRGQGAYAAPGAGTMTVGATMEAGV
ADPAVDPAKGEPLRAVAARLFPALAEAPSTLAAGIRAATPDGLPMVGWSEAPGVLLAVGARRNGWLLAPLVAQVVAACVT
GRDPGAYGPRFDPARFRKPGLRGTA

Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the thiG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006076
- InterPro:   IPR012727
- InterPro:   IPR008867 [H]

Pfam domain/function: PF01266 DAO; PF05690 ThiG [H]

EC number: NA

Molecular weight: Translated: 34712; Mature: 34581

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPVVTIAGAGALGLGAALALADAGCRVTVCDPAAPAANASGVAAGMIAPAFEAVLDPQ
CCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC
ARPHFELLLAARDLWPALAERAGVELRRDGALAAGDEAWLEEVARGLAALGFRAMELPGS
CCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCH
AARAMAPGLSEDLPRALLTREDWRIEAAQALGRLRAAAEAAGVAFRAEAVRERGGADVLM
HHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VATGAGEADLAPELSVLSPIKGHILRLAAPWAAGAVVRGQGAYAAPGAGTMTVGATMEAG
EEECCCCCCCCCCHHHHCHHHHHEEEEECCCCCCEEEECCCCCCCCCCCCEEECCCHHCC
VADPAVDPAKGEPLRAVAARLFPALAEAPSTLAAGIRAATPDGLPMVGWSEAPGVLLAVG
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEC
ARRNGWLLAPLVAQVVAACVTGRDPGAYGPRFDPARFRKPGLRGTA
CCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure 
SGPVVTIAGAGALGLGAALALADAGCRVTVCDPAAPAANASGVAAGMIAPAFEAVLDPQ
CCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC
ARPHFELLLAARDLWPALAERAGVELRRDGALAAGDEAWLEEVARGLAALGFRAMELPGS
CCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCH
AARAMAPGLSEDLPRALLTREDWRIEAAQALGRLRAAAEAAGVAFRAEAVRERGGADVLM
HHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VATGAGEADLAPELSVLSPIKGHILRLAAPWAAGAVVRGQGAYAAPGAGTMTVGATMEAG
EEECCCCCCCCCCHHHHCHHHHHEEEEECCCCCCEEEECCCCCCCCCCCCEEECCCHHCC
VADPAVDPAKGEPLRAVAARLFPALAEAPSTLAAGIRAATPDGLPMVGWSEAPGVLLAVG
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEC
ARRNGWLLAPLVAQVVAACVTGRDPGAYGPRFDPARFRKPGLRGTA
CCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA