| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104560
Identifier: 197104560
GI number: 197104560
Start: 1241708
End: 1242784
Strand: Direct
Name: 197104560
Synonym: PHZ_c1094
Alternate gene names: NA
Gene position: 1241708-1242784 (Clockwise)
Preceding gene: 197104559
Following gene: 197104563
Centisome position: 31.07
GC content: 74.65
Gene sequence:
>1077_bases ATGGGCCTGCTTAGGACCCTGCACGCCTGGGCCGGCGCGATCCTCGCGCTGATCCTCGTCGTGCTGGGGCTGAGCGGCAG CCTGCTGGTGCTGCGCGATCCGTGGGTGAAGCTGACCGTGCCCGAGGCGCGGGGCGGGGTCGCGGCCTCGCCGCGGGCGC TGGGCGCGGCGGTGCAGGCGATCCAGGCGCAGGCGCCGGGAGAAGTGCGCAACGTGACGCTGGCCGGTCCGCACCTGGGC GTCCACCGGGTCTATTTCACCGACAAGGACCAGGGCTATGCGGCGGCCGACGGCCGGCTGCTGGTCCGGTTCGCGCCGAC AGAGCGGGCGGAGGGCTGGCTGTTCGAGCTGCACCACCGGCTGCTGGCGGGCGAGACGGGGGACAAGGTCGTCGGCGCCG CCGGGATCGCCGGCGCGCTGCTGGTGCTGACGGGCGCGATCGTCTGGCTGCCGGCCTGGCGCAGCTTCGGCGCGCGGGTC TGGCCGAAGACCCTGACCAAGCGGGCGGACCTGGTGGGCTCGCATCGCAACCTCGGCGTGATCACGGCCTTGCCCGTGTT CGTCCTGTGCCTGACCGGCGGTGCGATCATCTTCCACGAGACGACGCAGGGCCTGATGGCCGCCGCCGCGCCGGGCCCCG CCGCGCCGAAGCCGCCGGCCGCGGGCGAGGGCGAGGTGAACTGGCTGCGGGCGCTGTCGGCCGCGCAGGCGGCCTTCCCC GACGCCACGCTGCGGATGGCCTCCACGCCCGGCAAGCCGGGGGCGCCGGCGACGATCCGGATGAAGCAGCCCGGCGAGTG GCATCCGAACGGCCGCACCGTGGTCTGGATCGATCCGTCGGACGAGCGCGTGCTGGGGACGGTGGACGCGATGGCGCTCG GCGCCGGGATGCGCGCCTACAACAGCTTCTACCCCCTGCACGCGGGCAAGGTGGGCGGGATCGCCTACGAGGCCGTGGTG TTCCTGGGCGGCCTGGCGCTGGCGGCCCTGGGCGGCTTCGGCCTCTGGTCGTTCCTAATCAAGCAGACGCGGCGCAGGCC CGTCCCCGCGAAGGCCGCGCCGCAGGCGGCGGAGTAG
Upstream 100 bases:
>100_bases ACATCAGCTACTTCAGCGACACCCAGAACCCCACGGACAACAACCGCTACTGGGCCGGCCGCGGGCGGACCTTCACGCTG ACGGTGGCGCGGCGGTTCTG
Downstream 100 bases:
>100_bases CCGCCTACTGCGCCGCCTCCTGGGCGTAGCCGAGCTGTTCGTTCAGGCGGTCCAGGACCTCGATGGCGGCCTCGGGCACG ACGGTGCCGGGCGGGAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Iron-Uptake Factor; PepSY-Associated TM Helix Family; PepSY-Associated TM Helix; PepSY-Associated TM Helix Domain Protein
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MGLLRTLHAWAGAILALILVVLGLSGSLLVLRDPWVKLTVPEARGGVAASPRALGAAVQAIQAQAPGEVRNVTLAGPHLG VHRVYFTDKDQGYAAADGRLLVRFAPTERAEGWLFELHHRLLAGETGDKVVGAAGIAGALLVLTGAIVWLPAWRSFGARV WPKTLTKRADLVGSHRNLGVITALPVFVLCLTGGAIIFHETTQGLMAAAAPGPAAPKPPAAGEGEVNWLRALSAAQAAFP DATLRMASTPGKPGAPATIRMKQPGEWHPNGRTVVWIDPSDERVLGTVDAMALGAGMRAYNSFYPLHAGKVGGIAYEAVV FLGGLALAALGGFGLWSFLIKQTRRRPVPAKAAPQAAE
Sequences:
>Translated_358_residues MGLLRTLHAWAGAILALILVVLGLSGSLLVLRDPWVKLTVPEARGGVAASPRALGAAVQAIQAQAPGEVRNVTLAGPHLG VHRVYFTDKDQGYAAADGRLLVRFAPTERAEGWLFELHHRLLAGETGDKVVGAAGIAGALLVLTGAIVWLPAWRSFGARV WPKTLTKRADLVGSHRNLGVITALPVFVLCLTGGAIIFHETTQGLMAAAAPGPAAPKPPAAGEGEVNWLRALSAAQAAFP DATLRMASTPGKPGAPATIRMKQPGEWHPNGRTVVWIDPSDERVLGTVDAMALGAGMRAYNSFYPLHAGKVGGIAYEAVV FLGGLALAALGGFGLWSFLIKQTRRRPVPAKAAPQAAE >Mature_357_residues GLLRTLHAWAGAILALILVVLGLSGSLLVLRDPWVKLTVPEARGGVAASPRALGAAVQAIQAQAPGEVRNVTLAGPHLGV HRVYFTDKDQGYAAADGRLLVRFAPTERAEGWLFELHHRLLAGETGDKVVGAAGIAGALLVLTGAIVWLPAWRSFGARVW PKTLTKRADLVGSHRNLGVITALPVFVLCLTGGAIIFHETTQGLMAAAAPGPAAPKPPAAGEGEVNWLRALSAAQAAFPD ATLRMASTPGKPGAPATIRMKQPGEWHPNGRTVVWIDPSDERVLGTVDAMALGAGMRAYNSFYPLHAGKVGGIAYEAVVF LGGLALAALGGFGLWSFLIKQTRRRPVPAKAAPQAAE
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37386; Mature: 37255
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLRTLHAWAGAILALILVVLGLSGSLLVLRDPWVKLTVPEARGGVAASPRALGAAVQA CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHH IQAQAPGEVRNVTLAGPHLGVHRVYFTDKDQGYAAADGRLLVRFAPTERAEGWLFELHHR HHHCCCCCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCCCCHHHHHHHH LLAGETGDKVVGAAGIAGALLVLTGAIVWLPAWRSFGARVWPKTLTKRADLVGSHRNLGV HHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCH ITALPVFVLCLTGGAIIFHETTQGLMAAAAPGPAAPKPPAAGEGEVNWLRALSAAQAAFP HHHHHHHHHHHHCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC DATLRMASTPGKPGAPATIRMKQPGEWHPNGRTVVWIDPSDERVLGTVDAMALGAGMRAY CCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHCCHHHH NSFYPLHAGKVGGIAYEAVVFLGGLALAALGGFGLWSFLIKQTRRRPVPAKAAPQAAE HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GLLRTLHAWAGAILALILVVLGLSGSLLVLRDPWVKLTVPEARGGVAASPRALGAAVQA CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHH IQAQAPGEVRNVTLAGPHLGVHRVYFTDKDQGYAAADGRLLVRFAPTERAEGWLFELHHR HHHCCCCCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCCCCHHHHHHHH LLAGETGDKVVGAAGIAGALLVLTGAIVWLPAWRSFGARVWPKTLTKRADLVGSHRNLGV HHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCH ITALPVFVLCLTGGAIIFHETTQGLMAAAAPGPAAPKPPAAGEGEVNWLRALSAAQAAFP HHHHHHHHHHHHCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC DATLRMASTPGKPGAPATIRMKQPGEWHPNGRTVVWIDPSDERVLGTVDAMALGAGMRAY CCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHCCHHHH NSFYPLHAGKVGGIAYEAVVFLGGLALAALGGFGLWSFLIKQTRRRPVPAKAAPQAAE HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA