Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is iutA [H]

Identifier: 197104559

GI number: 197104559

Start: 1239579

End: 1241708

Strand: Direct

Name: iutA [H]

Synonym: PHZ_c1093

Alternate gene names: 197104559

Gene position: 1239579-1241708 (Clockwise)

Preceding gene: 197104557

Following gene: 197104560

Centisome position: 31.02

GC content: 71.17

Gene sequence:

>2130_bases
ATGGGGCGGGCAGGCAGGACGTGGCTGGCCGGGGCGGCGTTTTCGGCGCTGGCCGCGGGCATGGCCCAGGCGCAGGAGCC
CGCGCCCATCAACCTCGACGAGGTGGTGATCACGGCGCTGCGCGTCGAGCAGCCGCGGGCGGCGACGCCGGCCACCGTGC
AGGTCATCGGCCAGGAGGAGCTGACCGCCCAGCAGGCGCTGTCGCAGAGCGCCGTCGAGGCCGTGGCGGCGCTGGCCCCC
TCGTTCTCGCCCACCCGCCAGAAGCTCTCGGGATTCGGCGAGACGGTGCGCGGCCGCTCGCCGCTCTATCTGGTGGACGG
GGTGCCCCAGTCGACGCCGCTGCGGGACGACAGCCGCGACGGCTTCACCATCGATCCGTTCTTCATCGATCGGGTCGAGG
TGGTGTTCGGCTCGAACGCCATCCAGGGCATCGGCGCCACCGGCGGGGTGGTGAACTACGTCACCGTCTCGACGCCGGGC
GAGGCCGCCGGCTGGACGGGCAAGGTGATGGGCCAGACCACCTTCGACGACAGCGGCGAGGGCGACAGCCTGGGCTACAA
GCTGGCGGGGATCGCCGGCCGCGACTTCGGCGTCTGGGACTTCACCGCGGGCGCCGCCTACGAGAAGCGCGGCGCGTTCT
ATGACGCGGACGGCCTGCGGATCGGCCCGGACAGCACCCAGGGCGACATCCAGGATTCCGACTCCTTCTCGCTGTTCGGC
AAGGCGGGCCTCGACCTGACCGACACGCGCCGCATCGAGATCATGGCCAACCACTTCCAGCTCGAGGGCGACGGCGACTA
TCGCGTGGTCGCGGGGAACCGGACGACCGGCCGCCCGACCAGCGGCTGGCGCGGGACGCAGGAGGGCCGCCCGCCGCGCA
ACAAGGTCACCTCGGTCGCCGCCACCTACCGCGACCGGGACCTCCTGGGCGGGACGTTCACCGCCCAGGCCTACGGCCAC
GACTACGAGGGCACCTTCGGCGGCGGCCGGGAGGGCACCTTCCAGGATCCGCGCATCGCCCCGGTGGGCACGCTGTTCGA
CCAGTCGGCCAACAACTCCGAGAAGCTGGGCTTCAAGCTGGACTACGAGCGCGAGGTGCAGGCGATCCCCGGCCTGAAGT
ACCTGGTCGGCCTCGACGGCATCCGGGACAAGACCTTCCAGGCGCTGATCCTGACCGACCGCTACTGGGTGCCCAAGACC
ACCTATGAGAGCCTCGCCCCGTTCCTGCAGCTGCGCCAGGCGCTGTTCGACGGGCGGGTGCACCTGTCGGCCGGCGCGCG
CCAGGAGAACGCCACCCTGAAGGTGGACGACTACGTGACGGTCTTCGCGGCCGGCGGCGGGGTCGAGGTGGCCGGCGGTT
CGCCGAGCTTCGAGGAAACCCTGTTCAACGTCGGCGGCACGGTCACGGTGGTGGACGGCGTCACCGCCTACGCCTCCTAT
GCCCAGGGCTTCACCATGCCGGACGTGGGCCGGGTGCTGCGGGCGGTGAACACCCCCGGTCGGGACGTGGACACCTATCT
GGATGTCGAGCCGGTGGTCTCGGACAACGTCGAGGTGGGCGTCGAGGTGGCGCGCGAGCGCTGGCGCGCCTCGCTGGCTT
ATTTCGAATCCAAGTCGGACCGCGGCGCGCTGCTGGTGCTCAACGCGGGCGGCACCTTCGACGTGCAGCGGCAGAAGACC
AAAATCGACGGCTTCGAGGCCACGCTGCGGGTGCAGGCGACCGACTGGCTCACCGTGGGCGGCGCCTACTCCAAGCTGGA
CGGGCGCACCGACGGCGACGGCGACGGGACGCTGGAGCGCGACCTGAACGGGGCGAACATCTCGCCCGACCGGCTGACGG
TCTACGCCGAGGGGACGTGGGGCCCGGCCTCGCTGCGCGTCCAGGCGCAGACGTTCGAGAGCCGGAGCTTCGAGGGCGAG
CCGGCGGCCAACGCCTTCGAGGGCTACACCGTGGTGGACGCCGTCGGCACGTGGCGGCTCGAGGCGGCCGACGTCAGCCT
GGGCATCCAGAACCTGCTGGACGAGCAGTACATCAGCTACTTCAGCGACACCCAGAACCCCACGGACAACAACCGCTACT
GGGCCGGCCGCGGGCGGACCTTCACGCTGACGGTGGCGCGGCGGTTCTGA

Upstream 100 bases:

>100_bases
CCGTTCCGAACCCGTCGGCGAGAATTCCGTGCTGATGAGATTGACTTGCAACTGCGTCGGCCTATGAGGCTGCGAAGCAT
TTGCAGACGGAGCTTTCTGG

Downstream 100 bases:

>100_bases
TGGGCCTGCTTAGGACCCTGCACGCCTGGGCCGGCGCGATCCTCGCGCTGATCCTCGTCGTGCTGGGGCTGAGCGGCAGC
CTGCTGGTGCTGCGCGATCC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Cloacin receptor [H]

Number of amino acids: Translated: 709; Mature: 708

Protein sequence:

>709_residues
MGRAGRTWLAGAAFSALAAGMAQAQEPAPINLDEVVITALRVEQPRAATPATVQVIGQEELTAQQALSQSAVEAVAALAP
SFSPTRQKLSGFGETVRGRSPLYLVDGVPQSTPLRDDSRDGFTIDPFFIDRVEVVFGSNAIQGIGATGGVVNYVTVSTPG
EAAGWTGKVMGQTTFDDSGEGDSLGYKLAGIAGRDFGVWDFTAGAAYEKRGAFYDADGLRIGPDSTQGDIQDSDSFSLFG
KAGLDLTDTRRIEIMANHFQLEGDGDYRVVAGNRTTGRPTSGWRGTQEGRPPRNKVTSVAATYRDRDLLGGTFTAQAYGH
DYEGTFGGGREGTFQDPRIAPVGTLFDQSANNSEKLGFKLDYEREVQAIPGLKYLVGLDGIRDKTFQALILTDRYWVPKT
TYESLAPFLQLRQALFDGRVHLSAGARQENATLKVDDYVTVFAAGGGVEVAGGSPSFEETLFNVGGTVTVVDGVTAYASY
AQGFTMPDVGRVLRAVNTPGRDVDTYLDVEPVVSDNVEVGVEVARERWRASLAYFESKSDRGALLVLNAGGTFDVQRQKT
KIDGFEATLRVQATDWLTVGGAYSKLDGRTDGDGDGTLERDLNGANISPDRLTVYAEGTWGPASLRVQAQTFESRSFEGE
PAANAFEGYTVVDAVGTWRLEAADVSLGIQNLLDEQYISYFSDTQNPTDNNRYWAGRGRTFTLTVARRF

Sequences:

>Translated_709_residues
MGRAGRTWLAGAAFSALAAGMAQAQEPAPINLDEVVITALRVEQPRAATPATVQVIGQEELTAQQALSQSAVEAVAALAP
SFSPTRQKLSGFGETVRGRSPLYLVDGVPQSTPLRDDSRDGFTIDPFFIDRVEVVFGSNAIQGIGATGGVVNYVTVSTPG
EAAGWTGKVMGQTTFDDSGEGDSLGYKLAGIAGRDFGVWDFTAGAAYEKRGAFYDADGLRIGPDSTQGDIQDSDSFSLFG
KAGLDLTDTRRIEIMANHFQLEGDGDYRVVAGNRTTGRPTSGWRGTQEGRPPRNKVTSVAATYRDRDLLGGTFTAQAYGH
DYEGTFGGGREGTFQDPRIAPVGTLFDQSANNSEKLGFKLDYEREVQAIPGLKYLVGLDGIRDKTFQALILTDRYWVPKT
TYESLAPFLQLRQALFDGRVHLSAGARQENATLKVDDYVTVFAAGGGVEVAGGSPSFEETLFNVGGTVTVVDGVTAYASY
AQGFTMPDVGRVLRAVNTPGRDVDTYLDVEPVVSDNVEVGVEVARERWRASLAYFESKSDRGALLVLNAGGTFDVQRQKT
KIDGFEATLRVQATDWLTVGGAYSKLDGRTDGDGDGTLERDLNGANISPDRLTVYAEGTWGPASLRVQAQTFESRSFEGE
PAANAFEGYTVVDAVGTWRLEAADVSLGIQNLLDEQYISYFSDTQNPTDNNRYWAGRGRTFTLTVARRF
>Mature_708_residues
GRAGRTWLAGAAFSALAAGMAQAQEPAPINLDEVVITALRVEQPRAATPATVQVIGQEELTAQQALSQSAVEAVAALAPS
FSPTRQKLSGFGETVRGRSPLYLVDGVPQSTPLRDDSRDGFTIDPFFIDRVEVVFGSNAIQGIGATGGVVNYVTVSTPGE
AAGWTGKVMGQTTFDDSGEGDSLGYKLAGIAGRDFGVWDFTAGAAYEKRGAFYDADGLRIGPDSTQGDIQDSDSFSLFGK
AGLDLTDTRRIEIMANHFQLEGDGDYRVVAGNRTTGRPTSGWRGTQEGRPPRNKVTSVAATYRDRDLLGGTFTAQAYGHD
YEGTFGGGREGTFQDPRIAPVGTLFDQSANNSEKLGFKLDYEREVQAIPGLKYLVGLDGIRDKTFQALILTDRYWVPKTT
YESLAPFLQLRQALFDGRVHLSAGARQENATLKVDDYVTVFAAGGGVEVAGGSPSFEETLFNVGGTVTVVDGVTAYASYA
QGFTMPDVGRVLRAVNTPGRDVDTYLDVEPVVSDNVEVGVEVARERWRASLAYFESKSDRGALLVLNAGGTFDVQRQKTK
IDGFEATLRVQATDWLTVGGAYSKLDGRTDGDGDGTLERDLNGANISPDRLTVYAEGTWGPASLRVQAQTFESRSFEGEP
AANAFEGYTVVDAVGTWRLEAADVSLGIQNLLDEQYISYFSDTQNPTDNNRYWAGRGRTFTLTVARRF

Specific function: Receptor for cloacin DF13/aerobactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 76262; Mature: 76131

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRAGRTWLAGAAFSALAAGMAQAQEPAPINLDEVVITALRVEQPRAATPATVQVIGQEE
CCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCCCCCCEEEEECCHH
LTAQQALSQSAVEAVAALAPSFSPTRQKLSGFGETVRGRSPLYLVDGVPQSTPLRDDSRD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCCCCEEEECCCCCCCCCCCCCCC
GFTIDPFFIDRVEVVFGSNAIQGIGATGGVVNYVTVSTPGEAAGWTGKVMGQTTFDDSGE
CEEECCCEECEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCC
GDSLGYKLAGIAGRDFGVWDFTAGAAYEKRGAFYDADGLRIGPDSTQGDIQDSDSFSLFG
CCCCCEEEEEECCCCCCEEEECCCCCHHHCCCEECCCCCEECCCCCCCCCCCCCCEEEEE
KAGLDLTDTRRIEIMANHFQLEGDGDYRVVAGNRTTGRPTSGWRGTQEGRPPRNKVTSVA
CCCCCCCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ATYRDRDLLGGTFTAQAYGHDYEGTFGGGREGTFQDPRIAPVGTLFDQSANNSEKLGFKL
HHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEE
DYEREVQAIPGLKYLVGLDGIRDKTFQALILTDRYWVPKTTYESLAPFLQLRQALFDGRV
CCCHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEE
HLSAGARQENATLKVDDYVTVFAAGGGVEVAGGSPSFEETLFNVGGTVTVVDGVTAYASY
EEECCCCCCCCEEEECCEEEEEEECCCEEECCCCCCHHHHHHHCCCEEEEECCHHHHHHH
AQGFTMPDVGRVLRAVNTPGRDVDTYLDVEPVVSDNVEVGVEVARERWRASLAYFESKSD
HCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
RGALLVLNAGGTFDVQRQKTKIDGFEATLRVQATDWLTVGGAYSKLDGRTDGDGDGTLER
CCEEEEEECCCCEEECHHHCCCCCEEEEEEEEECCEEEECCCHHHCCCCCCCCCCCCEEC
DLNGANISPDRLTVYAEGTWGPASLRVQAQTFESRSFEGEPAANAFEGYTVVDAVGTWRL
CCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEE
EAADVSLGIQNLLDEQYISYFSDTQNPTDNNRYWAGRGRTFTLTVARRF
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEEEECC
>Mature Secondary Structure 
GRAGRTWLAGAAFSALAAGMAQAQEPAPINLDEVVITALRVEQPRAATPATVQVIGQEE
CCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCCCCCCEEEEECCHH
LTAQQALSQSAVEAVAALAPSFSPTRQKLSGFGETVRGRSPLYLVDGVPQSTPLRDDSRD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCCCCEEEECCCCCCCCCCCCCCC
GFTIDPFFIDRVEVVFGSNAIQGIGATGGVVNYVTVSTPGEAAGWTGKVMGQTTFDDSGE
CEEECCCEECEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCC
GDSLGYKLAGIAGRDFGVWDFTAGAAYEKRGAFYDADGLRIGPDSTQGDIQDSDSFSLFG
CCCCCEEEEEECCCCCCEEEECCCCCHHHCCCEECCCCCEECCCCCCCCCCCCCCEEEEE
KAGLDLTDTRRIEIMANHFQLEGDGDYRVVAGNRTTGRPTSGWRGTQEGRPPRNKVTSVA
CCCCCCCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ATYRDRDLLGGTFTAQAYGHDYEGTFGGGREGTFQDPRIAPVGTLFDQSANNSEKLGFKL
HHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEE
DYEREVQAIPGLKYLVGLDGIRDKTFQALILTDRYWVPKTTYESLAPFLQLRQALFDGRV
CCCHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEE
HLSAGARQENATLKVDDYVTVFAAGGGVEVAGGSPSFEETLFNVGGTVTVVDGVTAYASY
EEECCCCCCCCEEEECCEEEEEEECCCEEECCCCCCHHHHHHHCCCEEEEECCHHHHHHH
AQGFTMPDVGRVLRAVNTPGRDVDTYLDVEPVVSDNVEVGVEVARERWRASLAYFESKSD
HCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
RGALLVLNAGGTFDVQRQKTKIDGFEATLRVQATDWLTVGGAYSKLDGRTDGDGDGTLER
CCEEEEEECCCCEEECHHHCCCCCEEEEEEEEECCEEEECCCHHHCCCCCCCCCCCCEEC
DLNGANISPDRLTVYAEGTWGPASLRVQAQTFESRSFEGEPAANAFEGYTVVDAVGTWRL
CCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEE
EAADVSLGIQNLLDEQYISYFSDTQNPTDNNRYWAGRGRTFTLTVARRF
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA