| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is iutA [H]
Identifier: 197104559
GI number: 197104559
Start: 1239579
End: 1241708
Strand: Direct
Name: iutA [H]
Synonym: PHZ_c1093
Alternate gene names: 197104559
Gene position: 1239579-1241708 (Clockwise)
Preceding gene: 197104557
Following gene: 197104560
Centisome position: 31.02
GC content: 71.17
Gene sequence:
>2130_bases ATGGGGCGGGCAGGCAGGACGTGGCTGGCCGGGGCGGCGTTTTCGGCGCTGGCCGCGGGCATGGCCCAGGCGCAGGAGCC CGCGCCCATCAACCTCGACGAGGTGGTGATCACGGCGCTGCGCGTCGAGCAGCCGCGGGCGGCGACGCCGGCCACCGTGC AGGTCATCGGCCAGGAGGAGCTGACCGCCCAGCAGGCGCTGTCGCAGAGCGCCGTCGAGGCCGTGGCGGCGCTGGCCCCC TCGTTCTCGCCCACCCGCCAGAAGCTCTCGGGATTCGGCGAGACGGTGCGCGGCCGCTCGCCGCTCTATCTGGTGGACGG GGTGCCCCAGTCGACGCCGCTGCGGGACGACAGCCGCGACGGCTTCACCATCGATCCGTTCTTCATCGATCGGGTCGAGG TGGTGTTCGGCTCGAACGCCATCCAGGGCATCGGCGCCACCGGCGGGGTGGTGAACTACGTCACCGTCTCGACGCCGGGC GAGGCCGCCGGCTGGACGGGCAAGGTGATGGGCCAGACCACCTTCGACGACAGCGGCGAGGGCGACAGCCTGGGCTACAA GCTGGCGGGGATCGCCGGCCGCGACTTCGGCGTCTGGGACTTCACCGCGGGCGCCGCCTACGAGAAGCGCGGCGCGTTCT ATGACGCGGACGGCCTGCGGATCGGCCCGGACAGCACCCAGGGCGACATCCAGGATTCCGACTCCTTCTCGCTGTTCGGC AAGGCGGGCCTCGACCTGACCGACACGCGCCGCATCGAGATCATGGCCAACCACTTCCAGCTCGAGGGCGACGGCGACTA TCGCGTGGTCGCGGGGAACCGGACGACCGGCCGCCCGACCAGCGGCTGGCGCGGGACGCAGGAGGGCCGCCCGCCGCGCA ACAAGGTCACCTCGGTCGCCGCCACCTACCGCGACCGGGACCTCCTGGGCGGGACGTTCACCGCCCAGGCCTACGGCCAC GACTACGAGGGCACCTTCGGCGGCGGCCGGGAGGGCACCTTCCAGGATCCGCGCATCGCCCCGGTGGGCACGCTGTTCGA CCAGTCGGCCAACAACTCCGAGAAGCTGGGCTTCAAGCTGGACTACGAGCGCGAGGTGCAGGCGATCCCCGGCCTGAAGT ACCTGGTCGGCCTCGACGGCATCCGGGACAAGACCTTCCAGGCGCTGATCCTGACCGACCGCTACTGGGTGCCCAAGACC ACCTATGAGAGCCTCGCCCCGTTCCTGCAGCTGCGCCAGGCGCTGTTCGACGGGCGGGTGCACCTGTCGGCCGGCGCGCG CCAGGAGAACGCCACCCTGAAGGTGGACGACTACGTGACGGTCTTCGCGGCCGGCGGCGGGGTCGAGGTGGCCGGCGGTT CGCCGAGCTTCGAGGAAACCCTGTTCAACGTCGGCGGCACGGTCACGGTGGTGGACGGCGTCACCGCCTACGCCTCCTAT GCCCAGGGCTTCACCATGCCGGACGTGGGCCGGGTGCTGCGGGCGGTGAACACCCCCGGTCGGGACGTGGACACCTATCT GGATGTCGAGCCGGTGGTCTCGGACAACGTCGAGGTGGGCGTCGAGGTGGCGCGCGAGCGCTGGCGCGCCTCGCTGGCTT ATTTCGAATCCAAGTCGGACCGCGGCGCGCTGCTGGTGCTCAACGCGGGCGGCACCTTCGACGTGCAGCGGCAGAAGACC AAAATCGACGGCTTCGAGGCCACGCTGCGGGTGCAGGCGACCGACTGGCTCACCGTGGGCGGCGCCTACTCCAAGCTGGA CGGGCGCACCGACGGCGACGGCGACGGGACGCTGGAGCGCGACCTGAACGGGGCGAACATCTCGCCCGACCGGCTGACGG TCTACGCCGAGGGGACGTGGGGCCCGGCCTCGCTGCGCGTCCAGGCGCAGACGTTCGAGAGCCGGAGCTTCGAGGGCGAG CCGGCGGCCAACGCCTTCGAGGGCTACACCGTGGTGGACGCCGTCGGCACGTGGCGGCTCGAGGCGGCCGACGTCAGCCT GGGCATCCAGAACCTGCTGGACGAGCAGTACATCAGCTACTTCAGCGACACCCAGAACCCCACGGACAACAACCGCTACT GGGCCGGCCGCGGGCGGACCTTCACGCTGACGGTGGCGCGGCGGTTCTGA
Upstream 100 bases:
>100_bases CCGTTCCGAACCCGTCGGCGAGAATTCCGTGCTGATGAGATTGACTTGCAACTGCGTCGGCCTATGAGGCTGCGAAGCAT TTGCAGACGGAGCTTTCTGG
Downstream 100 bases:
>100_bases TGGGCCTGCTTAGGACCCTGCACGCCTGGGCCGGCGCGATCCTCGCGCTGATCCTCGTCGTGCTGGGGCTGAGCGGCAGC CTGCTGGTGCTGCGCGATCC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Cloacin receptor [H]
Number of amino acids: Translated: 709; Mature: 708
Protein sequence:
>709_residues MGRAGRTWLAGAAFSALAAGMAQAQEPAPINLDEVVITALRVEQPRAATPATVQVIGQEELTAQQALSQSAVEAVAALAP SFSPTRQKLSGFGETVRGRSPLYLVDGVPQSTPLRDDSRDGFTIDPFFIDRVEVVFGSNAIQGIGATGGVVNYVTVSTPG EAAGWTGKVMGQTTFDDSGEGDSLGYKLAGIAGRDFGVWDFTAGAAYEKRGAFYDADGLRIGPDSTQGDIQDSDSFSLFG KAGLDLTDTRRIEIMANHFQLEGDGDYRVVAGNRTTGRPTSGWRGTQEGRPPRNKVTSVAATYRDRDLLGGTFTAQAYGH DYEGTFGGGREGTFQDPRIAPVGTLFDQSANNSEKLGFKLDYEREVQAIPGLKYLVGLDGIRDKTFQALILTDRYWVPKT TYESLAPFLQLRQALFDGRVHLSAGARQENATLKVDDYVTVFAAGGGVEVAGGSPSFEETLFNVGGTVTVVDGVTAYASY AQGFTMPDVGRVLRAVNTPGRDVDTYLDVEPVVSDNVEVGVEVARERWRASLAYFESKSDRGALLVLNAGGTFDVQRQKT KIDGFEATLRVQATDWLTVGGAYSKLDGRTDGDGDGTLERDLNGANISPDRLTVYAEGTWGPASLRVQAQTFESRSFEGE PAANAFEGYTVVDAVGTWRLEAADVSLGIQNLLDEQYISYFSDTQNPTDNNRYWAGRGRTFTLTVARRF
Sequences:
>Translated_709_residues MGRAGRTWLAGAAFSALAAGMAQAQEPAPINLDEVVITALRVEQPRAATPATVQVIGQEELTAQQALSQSAVEAVAALAP SFSPTRQKLSGFGETVRGRSPLYLVDGVPQSTPLRDDSRDGFTIDPFFIDRVEVVFGSNAIQGIGATGGVVNYVTVSTPG EAAGWTGKVMGQTTFDDSGEGDSLGYKLAGIAGRDFGVWDFTAGAAYEKRGAFYDADGLRIGPDSTQGDIQDSDSFSLFG KAGLDLTDTRRIEIMANHFQLEGDGDYRVVAGNRTTGRPTSGWRGTQEGRPPRNKVTSVAATYRDRDLLGGTFTAQAYGH DYEGTFGGGREGTFQDPRIAPVGTLFDQSANNSEKLGFKLDYEREVQAIPGLKYLVGLDGIRDKTFQALILTDRYWVPKT TYESLAPFLQLRQALFDGRVHLSAGARQENATLKVDDYVTVFAAGGGVEVAGGSPSFEETLFNVGGTVTVVDGVTAYASY AQGFTMPDVGRVLRAVNTPGRDVDTYLDVEPVVSDNVEVGVEVARERWRASLAYFESKSDRGALLVLNAGGTFDVQRQKT KIDGFEATLRVQATDWLTVGGAYSKLDGRTDGDGDGTLERDLNGANISPDRLTVYAEGTWGPASLRVQAQTFESRSFEGE PAANAFEGYTVVDAVGTWRLEAADVSLGIQNLLDEQYISYFSDTQNPTDNNRYWAGRGRTFTLTVARRF >Mature_708_residues GRAGRTWLAGAAFSALAAGMAQAQEPAPINLDEVVITALRVEQPRAATPATVQVIGQEELTAQQALSQSAVEAVAALAPS FSPTRQKLSGFGETVRGRSPLYLVDGVPQSTPLRDDSRDGFTIDPFFIDRVEVVFGSNAIQGIGATGGVVNYVTVSTPGE AAGWTGKVMGQTTFDDSGEGDSLGYKLAGIAGRDFGVWDFTAGAAYEKRGAFYDADGLRIGPDSTQGDIQDSDSFSLFGK AGLDLTDTRRIEIMANHFQLEGDGDYRVVAGNRTTGRPTSGWRGTQEGRPPRNKVTSVAATYRDRDLLGGTFTAQAYGHD YEGTFGGGREGTFQDPRIAPVGTLFDQSANNSEKLGFKLDYEREVQAIPGLKYLVGLDGIRDKTFQALILTDRYWVPKTT YESLAPFLQLRQALFDGRVHLSAGARQENATLKVDDYVTVFAAGGGVEVAGGSPSFEETLFNVGGTVTVVDGVTAYASYA QGFTMPDVGRVLRAVNTPGRDVDTYLDVEPVVSDNVEVGVEVARERWRASLAYFESKSDRGALLVLNAGGTFDVQRQKTK IDGFEATLRVQATDWLTVGGAYSKLDGRTDGDGDGTLERDLNGANISPDRLTVYAEGTWGPASLRVQAQTFESRSFEGEP AANAFEGYTVVDAVGTWRLEAADVSLGIQNLLDEQYISYFSDTQNPTDNNRYWAGRGRTFTLTVARRF
Specific function: Receptor for cloacin DF13/aerobactin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 76262; Mature: 76131
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRAGRTWLAGAAFSALAAGMAQAQEPAPINLDEVVITALRVEQPRAATPATVQVIGQEE CCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCCCCCCEEEEECCHH LTAQQALSQSAVEAVAALAPSFSPTRQKLSGFGETVRGRSPLYLVDGVPQSTPLRDDSRD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCCCCEEEECCCCCCCCCCCCCCC GFTIDPFFIDRVEVVFGSNAIQGIGATGGVVNYVTVSTPGEAAGWTGKVMGQTTFDDSGE CEEECCCEECEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCC GDSLGYKLAGIAGRDFGVWDFTAGAAYEKRGAFYDADGLRIGPDSTQGDIQDSDSFSLFG CCCCCEEEEEECCCCCCEEEECCCCCHHHCCCEECCCCCEECCCCCCCCCCCCCCEEEEE KAGLDLTDTRRIEIMANHFQLEGDGDYRVVAGNRTTGRPTSGWRGTQEGRPPRNKVTSVA CCCCCCCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH ATYRDRDLLGGTFTAQAYGHDYEGTFGGGREGTFQDPRIAPVGTLFDQSANNSEKLGFKL HHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEE DYEREVQAIPGLKYLVGLDGIRDKTFQALILTDRYWVPKTTYESLAPFLQLRQALFDGRV CCCHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEE HLSAGARQENATLKVDDYVTVFAAGGGVEVAGGSPSFEETLFNVGGTVTVVDGVTAYASY EEECCCCCCCCEEEECCEEEEEEECCCEEECCCCCCHHHHHHHCCCEEEEECCHHHHHHH AQGFTMPDVGRVLRAVNTPGRDVDTYLDVEPVVSDNVEVGVEVARERWRASLAYFESKSD HCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC RGALLVLNAGGTFDVQRQKTKIDGFEATLRVQATDWLTVGGAYSKLDGRTDGDGDGTLER CCEEEEEECCCCEEECHHHCCCCCEEEEEEEEECCEEEECCCHHHCCCCCCCCCCCCEEC DLNGANISPDRLTVYAEGTWGPASLRVQAQTFESRSFEGEPAANAFEGYTVVDAVGTWRL CCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEE EAADVSLGIQNLLDEQYISYFSDTQNPTDNNRYWAGRGRTFTLTVARRF EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEEEECC >Mature Secondary Structure GRAGRTWLAGAAFSALAAGMAQAQEPAPINLDEVVITALRVEQPRAATPATVQVIGQEE CCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCCCCCCEEEEECCHH LTAQQALSQSAVEAVAALAPSFSPTRQKLSGFGETVRGRSPLYLVDGVPQSTPLRDDSRD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCCCCEEEECCCCCCCCCCCCCCC GFTIDPFFIDRVEVVFGSNAIQGIGATGGVVNYVTVSTPGEAAGWTGKVMGQTTFDDSGE CEEECCCEECEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCC GDSLGYKLAGIAGRDFGVWDFTAGAAYEKRGAFYDADGLRIGPDSTQGDIQDSDSFSLFG CCCCCEEEEEECCCCCCEEEECCCCCHHHCCCEECCCCCEECCCCCCCCCCCCCCEEEEE KAGLDLTDTRRIEIMANHFQLEGDGDYRVVAGNRTTGRPTSGWRGTQEGRPPRNKVTSVA CCCCCCCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH ATYRDRDLLGGTFTAQAYGHDYEGTFGGGREGTFQDPRIAPVGTLFDQSANNSEKLGFKL HHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEE DYEREVQAIPGLKYLVGLDGIRDKTFQALILTDRYWVPKTTYESLAPFLQLRQALFDGRV CCCHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEE HLSAGARQENATLKVDDYVTVFAAGGGVEVAGGSPSFEETLFNVGGTVTVVDGVTAYASY EEECCCCCCCCEEEECCEEEEEEECCCEEECCCCCCHHHHHHHCCCEEEEECCHHHHHHH AQGFTMPDVGRVLRAVNTPGRDVDTYLDVEPVVSDNVEVGVEVARERWRASLAYFESKSD HCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC RGALLVLNAGGTFDVQRQKTKIDGFEATLRVQATDWLTVGGAYSKLDGRTDGDGDGTLER CCEEEEEECCCCEEECHHHCCCCCEEEEEEEEECCEEEECCCHHHCCCCCCCCCCCCEEC DLNGANISPDRLTVYAEGTWGPASLRVQAQTFESRSFEGEPAANAFEGYTVVDAVGTWRL CCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEE EAADVSLGIQNLLDEQYISYFSDTQNPTDNNRYWAGRGRTFTLTVARRF EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA