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The map label for this gene is tolB [H]

Identifier: 197104557

GI number: 197104557

Start: 1236688

End: 1238781

Strand: Direct

Name: tolB [H]

Synonym: PHZ_c1091

Alternate gene names: 197104557

Gene position: 1236688-1238781 (Clockwise)

Preceding gene: 197104555

Following gene: 197104559

Centisome position: 30.95

GC content: 74.69

Gene sequence:

>2094_bases
ATGAACGAGCATGTCGCTCTCTGGCCGAAGCTGACGCTGGCGCGCGAACTGCCGTTCGTCCTGGCGGGGGCGCAGGTGCG
TCCGGCCGCGCTGGAGGTCGAGATCGGCGGCCGCGTCACGACGCTGGAGCCGCGGGTGATGAAGGTGCTGGTGGCCCTGC
ACCGGGCCCGCGGCCATCCGGTCAGCCGGGACGAGCTGATCGACCTGTGCTGGGAAGGCCGCATCGTCACGGAGGGGGCG
CTGAACCGCTGCGTGGCGCAGCTGCGCAAGGCGTTGGCGGGAGAGCCGCGCATCCACCTCGATACGATCCCGACGGTCGG
CTACCGGCTGCAGGCCGGCGGCGAGCCGCGGCGGGCGGCGATGGCGGCCGGGGACGAGGCCGCGCCCGCCGCGCCAGTAC
AGGCGGGCGTGCGCCGCCGGTGGGCCTGGGCCGCGGCGGCGGCGGGGATCGCGGCCGCGGGCGCGGCGGCGGCGTTCGCC
CTGTATCCGCGGCCGGTGGCTTGGACGGCGACCTCGTACCATCCGCTGACCGCCGAACGGGGACTGGAGACGCACCCGGC
GATCTCGCCGAACGGCCAGCAGATCGTCTATTCGCAGCGGCCGGATTCCACGGTGGGCCGGGACCTCTACATCCGCGGCG
TGGACCAGGGCACGCCGGTGCGGATCACCAGCCATCCGGCCGACGACCACAGCGCCGCCTGGTCGCCGGCGGGCGACCGC
ATCGTCTTCGTACGCACCGTGCCGAACGGGCCGTGCCAGCTGGTGGTCGCGCCCGTGCCGCTGGGGCCCGAGCGGGTGGC
GGCGCAGTGCCAGTCGTCCACCTACACCCGGGTGAGCTGGCTGGATGCGAACACCCTGGCGATCGGCGACCGGCCGGCGC
CCGACGCGCTCTGGCGCATCCGGGCGGTGGACCTGACCACGGGCGCGGTGCGCGACCTGACGAACCCGCCCGCGGACACC
CTGGGCGACAGCGACCCGATGGTCTCGCCCGACGGGCGGCGGGTGGCCTTCCGGCGCACCCTGCTGCACGGGGCCGACGA
CCTGTTCGTGAAGGACCTGACGACCGGTCGCGAGCAGGCTCTGACCACCGATGGCTGGAAGGCGGCGGGCTATGTCTGGT
CGGCCGACAGCCGGCATCTCTTCTATTCCTCGAACCGCGGCGGCGAGTTCGGACTGTGGACGGTGGACACGCGCCGGCCC
GGCGAGCCGCGGCGGATCAGCCTGGGCTTCGGCCAGCTCACCTTCAGCCGCATGTCGATCGACCGCCGCAACCGGCTGGC
GGTCGAGCTGCCGCGCGGGCGGACGAACATCGCGCTGGTCGGCCCCGACGGCGCCGTCACGCCGGTGACCAACGCGGCGG
GCGCGGACTGGGAGCCCGAGGGCGCCGCCGACGGGGCGGTGGCCTATGTCTCGAACCGTTCCGGCTCGTCCGAGCTGTGG
ATCAGCCCGCCTGGGACGCAGCCGGTGCGGCTGACGAACATCGTGGGCTCCTACGTCCATTCGCCGGCCTGGTCGCCGGA
CGGGCGCAGCCTGGCCTTCGTGGCGGTGAAGGGGCGCAAGGCCGAGATCTACACGGTGGCTCGTGACGGCTCGCGGCTGC
GCGCCGTCACGGACGACGGGACCGACAAGCTGGAGACCGCCTGGTCGCCCGACGGGCGCAGCCTGCGCTACCTACAGCGG
ACGGGAGCACGCTACCGGGTGATGGAGCTGGCCCTCGCGCCCGGCGCCTCGCCGCGGACGCTGGCCGAGCGCGCCTGGGG
GCAGATGCGGCCGGGTCCGGACGGGCGGCTGTTCGGGGTTCCCGTGGGCGGCGGACCGCTGGAAGCGCTGGACGGCGGCG
CGGTTCCGCAAGCGCGCCTGAGCAGCGCCGACGCCTTCGCCGTGGGTCCGGAGGGGGCCTATGTGCTGAGGGCGCGGCGG
GAAGCCGCGCCCTCGCTGTGGCTGCATCCCTGGTCGGGCCCGCCGCGCCCGATCGCCGTGCTGCCCACCGGAACGGGGGA
GATCGGCCTGGCGCCCGGCGGGCGGGTGCTCGTCTCGCAGAACGTGGACGAGCAGGTGGACCTGGGACTCTTCGACCTGA
GCGCCGCGCGCTAG

Upstream 100 bases:

>100_bases
GTAATCCCGGCGAACTGGGCTGTTCAGACCGGGCGGTTTGTCCGATGTTGCGGCCGGGGCGGCGCGGCTGCGGGCGTGAT
TTATTCGTGATGGTTTCGCG

Downstream 100 bases:

>100_bases
GTCGGCGCGGGGTAGCGGTAGCCTTCGCCCTGGCCCTGGGCCGCGGCGTACTGGCGCTCGACGAACTCCCAGTTCACGAC
CTCGTCGAACCAGCGCTCCA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 697; Mature: 697

Protein sequence:

>697_residues
MNEHVALWPKLTLARELPFVLAGAQVRPAALEVEIGGRVTTLEPRVMKVLVALHRARGHPVSRDELIDLCWEGRIVTEGA
LNRCVAQLRKALAGEPRIHLDTIPTVGYRLQAGGEPRRAAMAAGDEAAPAAPVQAGVRRRWAWAAAAAGIAAAGAAAAFA
LYPRPVAWTATSYHPLTAERGLETHPAISPNGQQIVYSQRPDSTVGRDLYIRGVDQGTPVRITSHPADDHSAAWSPAGDR
IVFVRTVPNGPCQLVVAPVPLGPERVAAQCQSSTYTRVSWLDANTLAIGDRPAPDALWRIRAVDLTTGAVRDLTNPPADT
LGDSDPMVSPDGRRVAFRRTLLHGADDLFVKDLTTGREQALTTDGWKAAGYVWSADSRHLFYSSNRGGEFGLWTVDTRRP
GEPRRISLGFGQLTFSRMSIDRRNRLAVELPRGRTNIALVGPDGAVTPVTNAAGADWEPEGAADGAVAYVSNRSGSSELW
ISPPGTQPVRLTNIVGSYVHSPAWSPDGRSLAFVAVKGRKAEIYTVARDGSRLRAVTDDGTDKLETAWSPDGRSLRYLQR
TGARYRVMELALAPGASPRTLAERAWGQMRPGPDGRLFGVPVGGGPLEALDGGAVPQARLSSADAFAVGPEGAYVLRARR
EAAPSLWLHPWSGPPRPIAVLPTGTGEIGLAPGGRVLVSQNVDEQVDLGLFDLSAAR

Sequences:

>Translated_697_residues
MNEHVALWPKLTLARELPFVLAGAQVRPAALEVEIGGRVTTLEPRVMKVLVALHRARGHPVSRDELIDLCWEGRIVTEGA
LNRCVAQLRKALAGEPRIHLDTIPTVGYRLQAGGEPRRAAMAAGDEAAPAAPVQAGVRRRWAWAAAAAGIAAAGAAAAFA
LYPRPVAWTATSYHPLTAERGLETHPAISPNGQQIVYSQRPDSTVGRDLYIRGVDQGTPVRITSHPADDHSAAWSPAGDR
IVFVRTVPNGPCQLVVAPVPLGPERVAAQCQSSTYTRVSWLDANTLAIGDRPAPDALWRIRAVDLTTGAVRDLTNPPADT
LGDSDPMVSPDGRRVAFRRTLLHGADDLFVKDLTTGREQALTTDGWKAAGYVWSADSRHLFYSSNRGGEFGLWTVDTRRP
GEPRRISLGFGQLTFSRMSIDRRNRLAVELPRGRTNIALVGPDGAVTPVTNAAGADWEPEGAADGAVAYVSNRSGSSELW
ISPPGTQPVRLTNIVGSYVHSPAWSPDGRSLAFVAVKGRKAEIYTVARDGSRLRAVTDDGTDKLETAWSPDGRSLRYLQR
TGARYRVMELALAPGASPRTLAERAWGQMRPGPDGRLFGVPVGGGPLEALDGGAVPQARLSSADAFAVGPEGAYVLRARR
EAAPSLWLHPWSGPPRPIAVLPTGTGEIGLAPGGRVLVSQNVDEQVDLGLFDLSAAR
>Mature_697_residues
MNEHVALWPKLTLARELPFVLAGAQVRPAALEVEIGGRVTTLEPRVMKVLVALHRARGHPVSRDELIDLCWEGRIVTEGA
LNRCVAQLRKALAGEPRIHLDTIPTVGYRLQAGGEPRRAAMAAGDEAAPAAPVQAGVRRRWAWAAAAAGIAAAGAAAAFA
LYPRPVAWTATSYHPLTAERGLETHPAISPNGQQIVYSQRPDSTVGRDLYIRGVDQGTPVRITSHPADDHSAAWSPAGDR
IVFVRTVPNGPCQLVVAPVPLGPERVAAQCQSSTYTRVSWLDANTLAIGDRPAPDALWRIRAVDLTTGAVRDLTNPPADT
LGDSDPMVSPDGRRVAFRRTLLHGADDLFVKDLTTGREQALTTDGWKAAGYVWSADSRHLFYSSNRGGEFGLWTVDTRRP
GEPRRISLGFGQLTFSRMSIDRRNRLAVELPRGRTNIALVGPDGAVTPVTNAAGADWEPEGAADGAVAYVSNRSGSSELW
ISPPGTQPVRLTNIVGSYVHSPAWSPDGRSLAFVAVKGRKAEIYTVARDGSRLRAVTDDGTDKLETAWSPDGRSLRYLQR
TGARYRVMELALAPGASPRTLAERAWGQMRPGPDGRLFGVPVGGGPLEALDGGAVPQARLSSADAFAVGPEGAYVLRARR
EAAPSLWLHPWSGPPRPIAVLPTGTGEIGLAPGGRVLVSQNVDEQVDLGLFDLSAAR

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 74491; Mature: 74491

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEHVALWPKLTLARELPFVLAGAQVRPAALEVEIGGRVTTLEPRVMKVLVALHRARGHP
CCCCEEECCCHHHHHCCCEEEECCEECCEEEEEEECCEEEEECHHHHHHHHHHHHHCCCC
VSRDELIDLCWEGRIVTEGALNRCVAQLRKALAGEPRIHLDTIPTVGYRLQAGGEPRRAA
CCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCHHHH
MAAGDEAAPAAPVQAGVRRRWAWAAAAAGIAAAGAAAAFALYPRPVAWTATSYHPLTAER
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCHHHC
GLETHPAISPNGQQIVYSQRPDSTVGRDLYIRGVDQGTPVRITSHPADDHSAAWSPAGDR
CCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCE
IVFVRTVPNGPCQLVVAPVPLGPERVAAQCQSSTYTRVSWLDANTLAIGDRPAPDALWRI
EEEEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCHHEEE
RAVDLTTGAVRDLTNPPADTLGDSDPMVSPDGRRVAFRRTLLHGADDLFVKDLTTGREQA
EEEEECCHHHHHCCCCCHHHCCCCCCEECCCCCEEHHHHHHHCCCCCEEEECCCCCHHHC
LTTDGWKAAGYVWSADSRHLFYSSNRGGEFGLWTVDTRRPGEPRRISLGFGQLTFSRMSI
EECCCCEECCEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCEEEEECCC
DRRNRLAVELPRGRTNIALVGPDGAVTPVTNAAGADWEPEGAADGAVAYVSNRSGSSELW
CCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEE
ISPPGTQPVRLTNIVGSYVHSPAWSPDGRSLAFVAVKGRKAEIYTVARDGSRLRAVTDDG
ECCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCEEEEECCCC
TDKLETAWSPDGRSLRYLQRTGARYRVMELALAPGASPRTLAERAWGQMRPGPDGRLFGV
CCCCEECCCCCCCCCHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEE
PVGGGPLEALDGGAVPQARLSSADAFAVGPEGAYVLRARREAAPSLWLHPWSGPPRPIAV
ECCCCCHHHCCCCCCCHHHHCCCCEEEECCCCEEEEEEHHHCCCCEEEECCCCCCCCEEE
LPTGTGEIGLAPGGRVLVSQNVDEQVDLGLFDLSAAR
EECCCCCEEECCCCEEEEECCCCCHHCCEEEECCCCC
>Mature Secondary Structure
MNEHVALWPKLTLARELPFVLAGAQVRPAALEVEIGGRVTTLEPRVMKVLVALHRARGHP
CCCCEEECCCHHHHHCCCEEEECCEECCEEEEEEECCEEEEECHHHHHHHHHHHHHCCCC
VSRDELIDLCWEGRIVTEGALNRCVAQLRKALAGEPRIHLDTIPTVGYRLQAGGEPRRAA
CCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCHHHH
MAAGDEAAPAAPVQAGVRRRWAWAAAAAGIAAAGAAAAFALYPRPVAWTATSYHPLTAER
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCHHHC
GLETHPAISPNGQQIVYSQRPDSTVGRDLYIRGVDQGTPVRITSHPADDHSAAWSPAGDR
CCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCE
IVFVRTVPNGPCQLVVAPVPLGPERVAAQCQSSTYTRVSWLDANTLAIGDRPAPDALWRI
EEEEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCHHEEE
RAVDLTTGAVRDLTNPPADTLGDSDPMVSPDGRRVAFRRTLLHGADDLFVKDLTTGREQA
EEEEECCHHHHHCCCCCHHHCCCCCCEECCCCCEEHHHHHHHCCCCCEEEECCCCCHHHC
LTTDGWKAAGYVWSADSRHLFYSSNRGGEFGLWTVDTRRPGEPRRISLGFGQLTFSRMSI
EECCCCEECCEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCEEEEECCC
DRRNRLAVELPRGRTNIALVGPDGAVTPVTNAAGADWEPEGAADGAVAYVSNRSGSSELW
CCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEE
ISPPGTQPVRLTNIVGSYVHSPAWSPDGRSLAFVAVKGRKAEIYTVARDGSRLRAVTDDG
ECCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCEEEEECCCC
TDKLETAWSPDGRSLRYLQRTGARYRVMELALAPGASPRTLAERAWGQMRPGPDGRLFGV
CCCCEECCCCCCCCCHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEE
PVGGGPLEALDGGAVPQARLSSADAFAVGPEGAYVLRARREAAPSLWLHPWSGPPRPIAV
ECCCCCHHHCCCCCCCHHHHCCCCEEEECCCCEEEEEEHHHCCCCEEEECCCCCCCCEEE
LPTGTGEIGLAPGGRVLVSQNVDEQVDLGLFDLSAAR
EECCCCCEEECCCCEEEEECCCCCHHCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA