| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104550
Identifier: 197104550
GI number: 197104550
Start: 1224336
End: 1226438
Strand: Reverse
Name: 197104550
Synonym: PHZ_c1084
Alternate gene names: NA
Gene position: 1226438-1224336 (Counterclockwise)
Preceding gene: 197104551
Following gene: 197104549
Centisome position: 30.69
GC content: 72.04
Gene sequence:
>2103_bases GTGTCGCGCCTGAGGCGCGGTGGGGCCTGGCTCGCCCTCGCCCCGGCGCTCTGGCTCGGTCTCGGGCCGGGCCTGGCCGC GGCGGAGCCGGCCGTCGCCGTACGGCCGACAGGGCCGCATCTGACCCGCGAGATGCTGGAGACCTTCGCGGGCTTCGTCC CCCCCACCAGGCTCAGTCCCGACCGCTATCCCGAGGCCGGGCGCTTCACCCCTCAGGAGATCGTCGAGGTCCTCTGCGGC CGCGCGTCGCCCGACTATCTGGCGCTGCTCAAGCAGAGGAACGGCCTCAGCGACGCCGACCTCAGGCGGCCCGCCGGCGA GCGGGCCTACCAGATCGACTTCATCCACTGCCCCTATGTGGCGAAATTCGAAACGCCGAAGGTCTATGTCGCGGAAAGCG GCGACACCTATGCGCAGATCCGGGAAGCCTTCACCGGGGTGCAGGGCACGCCCGCCTCCAACGCGAAATTCTTCGGCGTC CCCGAGGGCGTGATCCGCTCGGGGCGCCTGAGGCCCGGCGACGAGCTTCGGATCCCCTACGCCACCGCGGCCTCGATCCT GCCCGCCGACGAGGCGTCGGCGCTCTCCGAGAATCTCAAGCCGGCCTCGGGCCGCCTCGTGGCCAACTATGTCCAGTTCG GGCCGTCGACCACCGGCCGCATCGTCACCTACGTCGGCGACTCCGGGGTCGACGCGGTCCCCGAGAAGCCGGCCGAGTGC GGCCCCGATCCCGTCAGGCCCTTCGACGCCGCCGCGGTCGTCGCCGCCTACGAGTTCGCCGTGAAGCGGGCGGCGGCGCT GAACCAGCGGGTCGAGCATCCCGTCGACGTTATGGTCGCCGACAACGGCTTCTTCGGGGCCCGGCCCAGGCCGGCCGGCG GCTATGACTTCCGCACGCCGGAGTTCGACGGCCGGCACTTCGACACGGCGACCTACGGCCGGCGCCTCGGCCCGGTGCTC GAGGACCCCCAGGGCCAGCAGACCTATCCCGTCAACTATCAGAACGGGCTCAGCCCGGCGGGTCCGCTCAGCGGCCACGG CACCCACGTCACCGGCCTGGTGCTGGGCGGGACGGAATTTCTCCCGCACCGGTCCAGGGTGTACGGCCCGGGCGTCGGGT GGCTGAAGCTCACCCAGCTCAACGTCGGCCGCGGTTCGGCCACGCTGATGGCCGGCTCACAGCGGGAACTGAGCTCCCAG CTGCTGCTGCTCCAGGGCTCCCGGATCGTGAACCTGAGCCTCACCTACGACGGCCGGGCGAGCGGCATTCCCGCCAGCTT CACGTTCCTGGACGAGGCCTCCGACATGAAGGGGGTGGGCCGGCACCTCTTCGTGGTCGCCGCCGGCAACGACCGGCGCG GCAACGCGGCCGACTACCAGCCGGCCGCCAGGGGCGGGATCGGCGTCGCGGCCTCGGTGATCACCGTCGCGGCCACGGAC CCGGCCGGACGGCTCACCAGCTTCACCAACATCGGCTCCACGAACGTCGACGTCGCGGCCCCCGGCTGCAACCTGGAGTC CTGGACCTCGGACGCAGGGCCCGCGGTCGCCCTGAGCGGCACCTCCCAGGCTGCGCCGCTCGTCACGTTCCAGGCCAGCC TCATCCGCTCGCTGACCGGCGCGGACCCTGCGGACCTGAAGATCCGCATCGTCTCCAGCGGCGACCTCCTGCACCCCGAC GACGCGCGGAAGGTGTCGGGGCATACGCGGATCGACATCCCGCGCTCGCTCTACGTCTTCGACGACTATGTGCGCTGGAA GGCCGGCGCCGGCGAGCGCGCGGTGCTGGGGCGCGTGGTGAAGGCCTCGGGCCTCGTCTGCCGGGACGACGACCTCAAGG TCGACCTCGCCGAGCTTCGGGCCTTCAAGCAGGATCCGGCCCAGGCCTACGCCTTCCGCCGACCGTCCGCCCAGAACCGC CTCGCCGTGTGCGCCGTCGCCACGCCGGGCGCCGCCGATGTGCTGGTGGTGGAGCCGTCGGTCGAGGCGACGGGCGACCA CCCCGCCTCGCCCGAGAGCCTGCCGGGCGCCCCCGGCCGGTACATCACCATCCCGATGCGGGATGTCATCGACGTGACCA TGAGGATGAAGGATGCCGGCTGA
Upstream 100 bases:
>100_bases CCCTCGCGACGTCCGACTTCCGGACCTGGTCCGACCGCTGGATCGCGGACTCCGGGCGGCCCACCGTGTGCGGCGTGAAC AAGCGGCCGGGGGAGTTCCC
Downstream 100 bases:
>100_bases CCGCAGGATCCGGGGACTGGCGGCCGGCGCCCTCGCCGCGCTCGCCCTGCTCACGCCGCCGGCGTGGTCTCAATACGCTG CGCAGGGCGACATGACGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MSRLRRGGAWLALAPALWLGLGPGLAAAEPAVAVRPTGPHLTREMLETFAGFVPPTRLSPDRYPEAGRFTPQEIVEVLCG RASPDYLALLKQRNGLSDADLRRPAGERAYQIDFIHCPYVAKFETPKVYVAESGDTYAQIREAFTGVQGTPASNAKFFGV PEGVIRSGRLRPGDELRIPYATAASILPADEASALSENLKPASGRLVANYVQFGPSTTGRIVTYVGDSGVDAVPEKPAEC GPDPVRPFDAAAVVAAYEFAVKRAAALNQRVEHPVDVMVADNGFFGARPRPAGGYDFRTPEFDGRHFDTATYGRRLGPVL EDPQGQQTYPVNYQNGLSPAGPLSGHGTHVTGLVLGGTEFLPHRSRVYGPGVGWLKLTQLNVGRGSATLMAGSQRELSSQ LLLLQGSRIVNLSLTYDGRASGIPASFTFLDEASDMKGVGRHLFVVAAGNDRRGNAADYQPAARGGIGVAASVITVAATD PAGRLTSFTNIGSTNVDVAAPGCNLESWTSDAGPAVALSGTSQAAPLVTFQASLIRSLTGADPADLKIRIVSSGDLLHPD DARKVSGHTRIDIPRSLYVFDDYVRWKAGAGERAVLGRVVKASGLVCRDDDLKVDLAELRAFKQDPAQAYAFRRPSAQNR LAVCAVATPGAADVLVVEPSVEATGDHPASPESLPGAPGRYITIPMRDVIDVTMRMKDAG
Sequences:
>Translated_700_residues MSRLRRGGAWLALAPALWLGLGPGLAAAEPAVAVRPTGPHLTREMLETFAGFVPPTRLSPDRYPEAGRFTPQEIVEVLCG RASPDYLALLKQRNGLSDADLRRPAGERAYQIDFIHCPYVAKFETPKVYVAESGDTYAQIREAFTGVQGTPASNAKFFGV PEGVIRSGRLRPGDELRIPYATAASILPADEASALSENLKPASGRLVANYVQFGPSTTGRIVTYVGDSGVDAVPEKPAEC GPDPVRPFDAAAVVAAYEFAVKRAAALNQRVEHPVDVMVADNGFFGARPRPAGGYDFRTPEFDGRHFDTATYGRRLGPVL EDPQGQQTYPVNYQNGLSPAGPLSGHGTHVTGLVLGGTEFLPHRSRVYGPGVGWLKLTQLNVGRGSATLMAGSQRELSSQ LLLLQGSRIVNLSLTYDGRASGIPASFTFLDEASDMKGVGRHLFVVAAGNDRRGNAADYQPAARGGIGVAASVITVAATD PAGRLTSFTNIGSTNVDVAAPGCNLESWTSDAGPAVALSGTSQAAPLVTFQASLIRSLTGADPADLKIRIVSSGDLLHPD DARKVSGHTRIDIPRSLYVFDDYVRWKAGAGERAVLGRVVKASGLVCRDDDLKVDLAELRAFKQDPAQAYAFRRPSAQNR LAVCAVATPGAADVLVVEPSVEATGDHPASPESLPGAPGRYITIPMRDVIDVTMRMKDAG >Mature_699_residues SRLRRGGAWLALAPALWLGLGPGLAAAEPAVAVRPTGPHLTREMLETFAGFVPPTRLSPDRYPEAGRFTPQEIVEVLCGR ASPDYLALLKQRNGLSDADLRRPAGERAYQIDFIHCPYVAKFETPKVYVAESGDTYAQIREAFTGVQGTPASNAKFFGVP EGVIRSGRLRPGDELRIPYATAASILPADEASALSENLKPASGRLVANYVQFGPSTTGRIVTYVGDSGVDAVPEKPAECG PDPVRPFDAAAVVAAYEFAVKRAAALNQRVEHPVDVMVADNGFFGARPRPAGGYDFRTPEFDGRHFDTATYGRRLGPVLE DPQGQQTYPVNYQNGLSPAGPLSGHGTHVTGLVLGGTEFLPHRSRVYGPGVGWLKLTQLNVGRGSATLMAGSQRELSSQL LLLQGSRIVNLSLTYDGRASGIPASFTFLDEASDMKGVGRHLFVVAAGNDRRGNAADYQPAARGGIGVAASVITVAATDP AGRLTSFTNIGSTNVDVAAPGCNLESWTSDAGPAVALSGTSQAAPLVTFQASLIRSLTGADPADLKIRIVSSGDLLHPDD ARKVSGHTRIDIPRSLYVFDDYVRWKAGAGERAVLGRVVKASGLVCRDDDLKVDLAELRAFKQDPAQAYAFRRPSAQNRL AVCAVATPGAADVLVVEPSVEATGDHPASPESLPGAPGRYITIPMRDVIDVTMRMKDAG
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74156; Mature: 74025
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: PS00137 SUBTILASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLRRGGAWLALAPALWLGLGPGLAAAEPAVAVRPTGPHLTREMLETFAGFVPPTRLSP CCCCCCCCCEEEEHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCC DRYPEAGRFTPQEIVEVLCGRASPDYLALLKQRNGLSDADLRRPAGERAYQIDFIHCPYV CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCCCCCEEEEEEEECCEE AKFETPKVYVAESGDTYAQIREAFTGVQGTPASNAKFFGVPEGVIRSGRLRPGDELRIPY EEECCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCEECCH ATAASILPADEASALSENLKPASGRLVANYVQFGPSTTGRIVTYVGDSGVDAVPEKPAEC HHHHHCCCCCHHHHHHHCCCCCCCCEEEEEHHCCCCCCCEEEEEECCCCCCCCCCCCCCC GPDPVRPFDAAAVVAAYEFAVKRAAALNQRVEHPVDVMVADNGFFGARPRPAGGYDFRTP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC EFDGRHFDTATYGRRLGPVLEDPQGQQTYPVNYQNGLSPAGPLSGHGTHVTGLVLGGTEF CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHH LPHRSRVYGPGVGWLKLTQLNVGRGSATLMAGSQRELSSQLLLLQGSRIVNLSLTYDGRA CCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCHHHHHHEEEEEECCEEEEEEEEECCCC SGIPASFTFLDEASDMKGVGRHLFVVAAGNDRRGNAADYQPAARGGIGVAASVITVAATD CCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCCEEEEEEEEEECC PAGRLTSFTNIGSTNVDVAAPGCNLESWTSDAGPAVALSGTSQAAPLVTFQASLIRSLTG CCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHC ADPADLKIRIVSSGDLLHPDDARKVSGHTRIDIPRSLYVFDDYVRWKAGAGERAVLGRVV CCCCCEEEEEECCCCEECCCCCHHCCCCEEECCCCEEEEEEHEEEEECCCCCHHHHHHHH KASGLVCRDDDLKVDLAELRAFKQDPAQAYAFRRPSAQNRLAVCAVATPGAADVLVVEPS HHCCCEECCCCCEEEHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCC VEATGDHPASPESLPGAPGRYITIPMRDVIDVTMRMKDAG CCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHEEECCC >Mature Secondary Structure SRLRRGGAWLALAPALWLGLGPGLAAAEPAVAVRPTGPHLTREMLETFAGFVPPTRLSP CCCCCCCCEEEEHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCC DRYPEAGRFTPQEIVEVLCGRASPDYLALLKQRNGLSDADLRRPAGERAYQIDFIHCPYV CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCCCCCEEEEEEEECCEE AKFETPKVYVAESGDTYAQIREAFTGVQGTPASNAKFFGVPEGVIRSGRLRPGDELRIPY EEECCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCEECCH ATAASILPADEASALSENLKPASGRLVANYVQFGPSTTGRIVTYVGDSGVDAVPEKPAEC HHHHHCCCCCHHHHHHHCCCCCCCCEEEEEHHCCCCCCCEEEEEECCCCCCCCCCCCCCC GPDPVRPFDAAAVVAAYEFAVKRAAALNQRVEHPVDVMVADNGFFGARPRPAGGYDFRTP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC EFDGRHFDTATYGRRLGPVLEDPQGQQTYPVNYQNGLSPAGPLSGHGTHVTGLVLGGTEF CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHH LPHRSRVYGPGVGWLKLTQLNVGRGSATLMAGSQRELSSQLLLLQGSRIVNLSLTYDGRA CCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCHHHHHHEEEEEECCEEEEEEEEECCCC SGIPASFTFLDEASDMKGVGRHLFVVAAGNDRRGNAADYQPAARGGIGVAASVITVAATD CCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCCEEEEEEEEEECC PAGRLTSFTNIGSTNVDVAAPGCNLESWTSDAGPAVALSGTSQAAPLVTFQASLIRSLTG CCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHC ADPADLKIRIVSSGDLLHPDDARKVSGHTRIDIPRSLYVFDDYVRWKAGAGERAVLGRVV CCCCCEEEEEECCCCEECCCCCHHCCCCEEECCCCEEEEEEHEEEEECCCCCHHHHHHHH KASGLVCRDDDLKVDLAELRAFKQDPAQAYAFRRPSAQNRLAVCAVATPGAADVLVVEPS HHCCCEECCCCCEEEHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCC VEATGDHPASPESLPGAPGRYITIPMRDVIDVTMRMKDAG CCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA