| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104551
Identifier: 197104551
GI number: 197104551
Start: 1226426
End: 1227457
Strand: Reverse
Name: 197104551
Synonym: PHZ_c1085
Alternate gene names: NA
Gene position: 1227457-1226426 (Counterclockwise)
Preceding gene: 197104554
Following gene: 197104550
Centisome position: 30.72
GC content: 74.32
Gene sequence:
>1032_bases ATGAGGCGCGCGCTCCGTTCGCTGGCGGCATGCGGCCTCGTGGCCGGGGGCCTCGCCGCCTGCGGCGGACCGGGCGGGCC GCCGCCCGACGCGGTGGAGGCGGCGGAGGCGGTCGCGGCGTCCGCCGCTCCGGCCGACGAGGCGACGCCCGTCGTGGTCT TCCGTCCGCTCTCGCGCCTCGTCCCGCCCGGCGAGGTCCGCGTCATCAACGGCGAGCCCGTGCGCCCGCGCGACTGGCCC GCCATGGTCGGCGCCGTCATCGAGGTGCGGGACCGGAACGACCGGGTCGTCGAACGCAGCATCTGCACCGGAACCCTCGT CGGACCGCGGGTGATGCTGACCGCCGCCCATTGCGTGGACGGCGGCAAGGACAAGCCCGAACTGCCCGTCAGGATCGAGC TCGACGGGGCCGCGGTCGACGCCAGGTGCCGGATGCACGCGGCCTACGCCGCGGCGCCGAAGCCTGCGACCAGGACGCCG CGCGACAGCGCCGACTACGCGCTTTGCCTGCTGGGCCTCGACCTCCAGGCCCTCGACGCCTACCGCACCCTGGAGTTCGA GAGCATCGACCGGGACACCTCCCCCGATCGCCTCAACTGGGTGCTGGTGACGGGTTACGGCTGCACCGAGGTGGCGTTCA ACGAGCAGTGCGAGCCGGTGTTCGGGCCCGCGAAGGCCAGCCTGCTCGCCGGCAACGCCGCCATCTCGCGGCGGCCCTCG CCGGGGCCGGAACGCAACTATCTGCAGACGCGATCGGCGACGTCCAGCGACGCCGCCCTGTGCCCCGGCGACTCGGGCGG GCCGCTGCTGACCGGCGCGACGCTGCAGGACCAGACGGCGAGCCGGCGGATCGTCGCCGTGAATTCCTCGATCGCCGTCC CACGCTGCAGCGCGGTCGGGTTGACCAGCCGCTATTCGGCCCTCGCGACGTCCGACTTCCGGACCTGGTCCGACCGCTGG ATCGCGGACTCCGGGCGGCCCACCGTGTGCGGCGTGAACAAGCGGCCGGGGGAGTTCCCGTGTCGCGCCTGA
Upstream 100 bases:
>100_bases TGAAGGCCGAACTCGCCCGCACCACGACCGAAACCGCCCTGGCCGAGGCCAGGCTGGCCAGGCTGAAGGCGGAAGCCGCG CTCGCCGAGGAGCAAGGCGA
Downstream 100 bases:
>100_bases GGCGCGGTGGGGCCTGGCTCGCCCTCGCCCCGGCGCTCTGGCTCGGTCTCGGGCCGGGCCTGGCCGCGGCGGAGCCGGCC GTCGCCGTACGGCCGACAGG
Product: putative adipsin/complement factor D
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MRRALRSLAACGLVAGGLAACGGPGGPPPDAVEAAEAVAASAAPADEATPVVVFRPLSRLVPPGEVRVINGEPVRPRDWP AMVGAVIEVRDRNDRVVERSICTGTLVGPRVMLTAAHCVDGGKDKPELPVRIELDGAAVDARCRMHAAYAAAPKPATRTP RDSADYALCLLGLDLQALDAYRTLEFESIDRDTSPDRLNWVLVTGYGCTEVAFNEQCEPVFGPAKASLLAGNAAISRRPS PGPERNYLQTRSATSSDAALCPGDSGGPLLTGATLQDQTASRRIVAVNSSIAVPRCSAVGLTSRYSALATSDFRTWSDRW IADSGRPTVCGVNKRPGEFPCRA
Sequences:
>Translated_343_residues MRRALRSLAACGLVAGGLAACGGPGGPPPDAVEAAEAVAASAAPADEATPVVVFRPLSRLVPPGEVRVINGEPVRPRDWP AMVGAVIEVRDRNDRVVERSICTGTLVGPRVMLTAAHCVDGGKDKPELPVRIELDGAAVDARCRMHAAYAAAPKPATRTP RDSADYALCLLGLDLQALDAYRTLEFESIDRDTSPDRLNWVLVTGYGCTEVAFNEQCEPVFGPAKASLLAGNAAISRRPS PGPERNYLQTRSATSSDAALCPGDSGGPLLTGATLQDQTASRRIVAVNSSIAVPRCSAVGLTSRYSALATSDFRTWSDRW IADSGRPTVCGVNKRPGEFPCRA >Mature_343_residues MRRALRSLAACGLVAGGLAACGGPGGPPPDAVEAAEAVAASAAPADEATPVVVFRPLSRLVPPGEVRVINGEPVRPRDWP AMVGAVIEVRDRNDRVVERSICTGTLVGPRVMLTAAHCVDGGKDKPELPVRIELDGAAVDARCRMHAAYAAAPKPATRTP RDSADYALCLLGLDLQALDAYRTLEFESIDRDTSPDRLNWVLVTGYGCTEVAFNEQCEPVFGPAKASLLAGNAAISRRPS PGPERNYLQTRSATSSDAALCPGDSGGPLLTGATLQDQTASRRIVAVNSSIAVPRCSAVGLTSRYSALATSDFRTWSDRW IADSGRPTVCGVNKRPGEFPCRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36042; Mature: 36042
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRALRSLAACGLVAGGLAACGGPGGPPPDAVEAAEAVAASAAPADEATPVVVFRPLSRL CHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECHHHC VPPGEVRVINGEPVRPRDWPAMVGAVIEVRDRNDRVVERSICTGTLVGPRVMLTAAHCVD CCCCCEEEECCCCCCCCCHHHHHEEEEEEECCCCCEEHHHHCCCCCCCCEEEEEEHHHHC GGKDKPELPVRIELDGAAVDARCRMHAAYAAAPKPATRTPRDSADYALCLLGLDLQALDA CCCCCCCCCEEEEECCCEECCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHH YRTLEFESIDRDTSPDRLNWVLVTGYGCTEVAFNEQCEPVFGPAKASLLAGNAAISRRPS HHEEEHHCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCHHEEEECCHHHCCCCC PGPERNYLQTRSATSSDAALCPGDSGGPLLTGATLQDQTASRRIVAVNSSIAVPRCSAVG CCCCCCCEECCCCCCCCCEECCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCC LTSRYSALATSDFRTWSDRWIADSGRPTVCGVNKRPGEFPCRA CCHHHHHHHHCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure MRRALRSLAACGLVAGGLAACGGPGGPPPDAVEAAEAVAASAAPADEATPVVVFRPLSRL CHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECHHHC VPPGEVRVINGEPVRPRDWPAMVGAVIEVRDRNDRVVERSICTGTLVGPRVMLTAAHCVD CCCCCEEEECCCCCCCCCHHHHHEEEEEEECCCCCEEHHHHCCCCCCCCEEEEEEHHHHC GGKDKPELPVRIELDGAAVDARCRMHAAYAAAPKPATRTPRDSADYALCLLGLDLQALDA CCCCCCCCCEEEEECCCEECCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHH YRTLEFESIDRDTSPDRLNWVLVTGYGCTEVAFNEQCEPVFGPAKASLLAGNAAISRRPS HHEEEHHCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCHHEEEECCHHHCCCCC PGPERNYLQTRSATSSDAALCPGDSGGPLLTGATLQDQTASRRIVAVNSSIAVPRCSAVG CCCCCCCEECCCCCCCCCEECCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCC LTSRYSALATSDFRTWSDRWIADSGRPTVCGVNKRPGEFPCRA CCHHHHHHHHCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA