Click here to switch to the map view.

The map label for this gene is cinA [C]

Identifier: 197104539

GI number: 197104539

Start: 1210902

End: 1211663

Strand: Direct

Name: cinA [C]

Synonym: PHZ_c1073

Alternate gene names: 197104539

Gene position: 1210902-1211663 (Clockwise)

Preceding gene: 197104537

Following gene: 197104540

Centisome position: 30.3

GC content: 73.75

Gene sequence:

>762_bases
ATGAGCCAGGCCATTCCCGACCGCGTCACGGCCGCGGTGCTGATCATCGGCGACGAGATCCTCTCGGGCCGGACCCAGGA
CACCAACCTGCGCGACATCGCCCGCTACCTGGGCGTCCTCGGCGTCGACGTGGCCGAGGCGCGCACCGTGCCCGACGTGC
TGGAGGAGATCGTCGAGGCGCTGAACGCCCTGCGCGCGCGCCACGACTACGTGGTGACGACCGGCGGGATCGGGCCGACC
CACGACGACATCACCGCCGACGCGGTGGCCGCCGCGTTCGGGGTGGAGCTGATCGAGCATCCCGAGATCATCGCCATGCT
GGAGGCGCGGTTCGGCGACCAGCTGAACGCGGCGCGGCGGCGGATGGCGCGGGTGCCGGTGGGGGCGGACCTGGTGAAGA
ACCCGGTGCAGGGCCCGCCCGGCTTCACCATCGGCAACGTCTTCACCCTGGCCGGCGTGCCGCAGATCATGCGCGGCATG
CTGGAGGACGTGGGCCCGCGCCTGCGGGGCGGGCGGCCGACCGTCTCGCGCACCGTGCGGGTCGAGGGCGCGGGCGAGGG
CCAGATCGCCGCGCCGCTGGAGGGCGTGGCCAAGGCCCATCCGGACATGTCGCTGGGCAGCTATCCGTTCTTCACGCCCG
AGGGCTACGGCTCGAACCTCGTCGTCCGGGCGCGCGACCCCGAGGCGCTGGCGGGCGTGGTGCAGGAGCTGATCGCGGCC
CTGGCCGCGGCGGGGATCGCCCAGGCGCGCGAGGTCGAATAG

Upstream 100 bases:

>100_bases
CTTGTAGCGCGAGACCAGGCGGCCGCGGATCAGGGGCGAGGGGAAGTCCATGGCGTGGGCCGATAGCAAGCCCCCGAATG
ACCGGCTAGAGAGTGGCCTC

Downstream 100 bases:

>100_bases
GCGCGGCGGCGCGCAAGGCGCGTCGTGACAAACGGGTAATTTGATGCGCGAACGCCGTTGGCCTATCGTGGGTAGAGTTG
TCTGTGGGGAAAGTACGATG

Product: predicted nucleotide-utilizing enzyme/competence-damage associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSQAIPDRVTAAVLIIGDEILSGRTQDTNLRDIARYLGVLGVDVAEARTVPDVLEEIVEALNALRARHDYVVTTGGIGPT
HDDITADAVAAAFGVELIEHPEIIAMLEARFGDQLNAARRRMARVPVGADLVKNPVQGPPGFTIGNVFTLAGVPQIMRGM
LEDVGPRLRGGRPTVSRTVRVEGAGEGQIAAPLEGVAKAHPDMSLGSYPFFTPEGYGSNLVVRARDPEALAGVVQELIAA
LAAAGIAQAREVE

Sequences:

>Translated_253_residues
MSQAIPDRVTAAVLIIGDEILSGRTQDTNLRDIARYLGVLGVDVAEARTVPDVLEEIVEALNALRARHDYVVTTGGIGPT
HDDITADAVAAAFGVELIEHPEIIAMLEARFGDQLNAARRRMARVPVGADLVKNPVQGPPGFTIGNVFTLAGVPQIMRGM
LEDVGPRLRGGRPTVSRTVRVEGAGEGQIAAPLEGVAKAHPDMSLGSYPFFTPEGYGSNLVVRARDPEALAGVVQELIAA
LAAAGIAQAREVE
>Mature_252_residues
SQAIPDRVTAAVLIIGDEILSGRTQDTNLRDIARYLGVLGVDVAEARTVPDVLEEIVEALNALRARHDYVVTTGGIGPTH
DDITADAVAAAFGVELIEHPEIIAMLEARFGDQLNAARRRMARVPVGADLVKNPVQGPPGFTIGNVFTLAGVPQIMRGML
EDVGPRLRGGRPTVSRTVRVEGAGEGQIAAPLEGVAKAHPDMSLGSYPFFTPEGYGSNLVVRARDPEALAGVVQELIAAL
AAAGIAQAREVE

Specific function: Unknown

COG id: COG1058

COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Homo sapiens, GI41872403, Length=251, Percent_Identity=35.0597609561753, Blast_Score=121, Evalue=6e-28,
Organism=Homo sapiens, GI296434309, Length=251, Percent_Identity=35.0597609561753, Blast_Score=121, Evalue=6e-28,
Organism=Homo sapiens, GI41872389, Length=251, Percent_Identity=35.0597609561753, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI296434312, Length=229, Percent_Identity=33.1877729257642, Blast_Score=101, Evalue=5e-22,
Organism=Escherichia coli, GI1788583, Length=194, Percent_Identity=30.4123711340206, Blast_Score=84, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71993974, Length=265, Percent_Identity=27.5471698113208, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI71993966, Length=265, Percent_Identity=27.5471698113208, Blast_Score=100, Evalue=7e-22,
Organism=Saccharomyces cerevisiae, GI6323832, Length=268, Percent_Identity=30.5970149253731, Blast_Score=109, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453 [H]

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]

EC number: NA

Molecular weight: Translated: 26639; Mature: 26508

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAIPDRVTAAVLIIGDEILSGRTQDTNLRDIARYLGVLGVDVAEARTVPDVLEEIVEA
CCCCCCCHHHEEEEEECHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHH
LNALRARHDYVVTTGGIGPTHDDITADAVAAAFGVELIEHPEIIAMLEARFGDQLNAARR
HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHH
RMARVPVGADLVKNPVQGPPGFTIGNVFTLAGVPQIMRGMLEDVGPRLRGGRPTVSRTVR
HHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCHHCCCCCCCEEEEE
VEGAGEGQIAAPLEGVAKAHPDMSLGSYPFFTPEGYGSNLVVRARDPEALAGVVQELIAA
EECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
LAAAGIAQAREVE
HHHHHHHHHHCCC
>Mature Secondary Structure 
SQAIPDRVTAAVLIIGDEILSGRTQDTNLRDIARYLGVLGVDVAEARTVPDVLEEIVEA
CCCCCCHHHEEEEEECHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHH
LNALRARHDYVVTTGGIGPTHDDITADAVAAAFGVELIEHPEIIAMLEARFGDQLNAARR
HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHH
RMARVPVGADLVKNPVQGPPGFTIGNVFTLAGVPQIMRGMLEDVGPRLRGGRPTVSRTVR
HHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCHHCCCCCCCEEEEE
VEGAGEGQIAAPLEGVAKAHPDMSLGSYPFFTPEGYGSNLVVRARDPEALAGVVQELIAA
EECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
LAAAGIAQAREVE
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA