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The map label for this gene is csoR [H]

Identifier: 197104520

GI number: 197104520

Start: 1187487

End: 1187762

Strand: Reverse

Name: csoR [H]

Synonym: PHZ_c1054

Alternate gene names: 197104520

Gene position: 1187762-1187487 (Counterclockwise)

Preceding gene: 197104522

Following gene: 197104518

Centisome position: 29.72

GC content: 68.48

Gene sequence:

>276_bases
ATGAACCGCGAGAACAAGCCGCGTCTGCTGAACCGCCTGAACCGTATCGAGGGGCAGGTGCGGGGCATCGCCCGCATGGT
CGAGGAGGACCGCTACTGCATCGACGTGCTGACCCAGATCCAGGCGGTCCGCGCCGCCCTCTCGAAGGTCGAGACCGAGA
TGCTGCGCGACCACCTGGGCCACTGCATCGAGGGCGCCATCGTCAGCGGCGACAAGGAGGAGCAGCGCGCCAAGGCCGCC
GAGCTGGTTCAGCTCCTGGAGCGCACCGCCCGCTGA

Upstream 100 bases:

>100_bases
CCCCATGGGGGCATCAGCCGTTAGCCGCACATATACCCCCATGGGGCATATTGCAATTACCCCGGGAGGGTATATTGTCA
GAACCCGAACGGAGCCCGCC

Downstream 100 bases:

>100_bases
GCCCGAAAGCCCCGCCAGTCCCGGCGCAGCCGGATCACCAGCAGGATCAGGCCCGTCACCACCATCGGCAGCGTCAGCGC
CGCCGCCGCCACGAGCACAG

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MNRENKPRLLNRLNRIEGQVRGIARMVEEDRYCIDVLTQIQAVRAALSKVETEMLRDHLGHCIEGAIVSGDKEEQRAKAA
ELVQLLERTAR

Sequences:

>Translated_91_residues
MNRENKPRLLNRLNRIEGQVRGIARMVEEDRYCIDVLTQIQAVRAALSKVETEMLRDHLGHCIEGAIVSGDKEEQRAKAA
ELVQLLERTAR
>Mature_91_residues
MNRENKPRLLNRLNRIEGQVRGIARMVEEDRYCIDVLTQIQAVRAALSKVETEMLRDHLGHCIEGAIVSGDKEEQRAKAA
ELVQLLERTAR

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10424; Mature: 10424

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRENKPRLLNRLNRIEGQVRGIARMVEEDRYCIDVLTQIQAVRAALSKVETEMLRDHLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HCIEGAIVSGDKEEQRAKAAELVQLLERTAR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRENKPRLLNRLNRIEGQVRGIARMVEEDRYCIDVLTQIQAVRAALSKVETEMLRDHLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HCIEGAIVSGDKEEQRAKAAELVQLLERTAR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]