| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104508
Identifier: 197104508
GI number: 197104508
Start: 1167377
End: 1168483
Strand: Reverse
Name: 197104508
Synonym: PHZ_c1042
Alternate gene names: NA
Gene position: 1168483-1167377 (Counterclockwise)
Preceding gene: 197104509
Following gene: 197104507
Centisome position: 29.24
GC content: 76.96
Gene sequence:
>1107_bases ATGATCGCCAACGACGAACACTGGACGGCGGTCGCCGACCTCTTCGCCGCGGCCGCGCTGGACGGCTCCTGGCCCGTCGC GCTCGAAGGCCTGGCGGACGCCTGCGGGGCCGAACGCGGCGAACTGATCGGCGTCGGCGCCGACCGCGCCGTCCCCTTCA ACTGGATGACCCGCATGGACCCGTCCGGGCTGGACGAGTTCGTCGGCATGGGCGGAGGCGATCCGGCGCGCAATCCGCGG GTGCGGATGGGCCTGCGCGCGCCGCTCCTGGCCAGCTGGCACGACGTCCGCTGCGCCACCGAGGACGAACTGCGCCGCAA CTTCGACTACGCCGACTACTGCCGTCGCTGGGACATCCCCTACGGCAGCCAGTCGACCCTCATGCGCGACGACGGCATGC TCATCGGCCTGGCCGTGCTGCGGGGCGAGCGCCGCGGCGTGCCGCAGGCCGAGGACCGCCGCGCCTTCGAGTCTCTGGTC GGCCAAGTCCGGGCGGCCGTGCGGACCCAGATCACGCTCGAGGGCCAGGGGCCCGCCCTCCTGGCCGGCGCGCTCGAGTC GGCGGGCGTGGCCGCCTTCGTCTGCGACGGCGCCGGCCGCGCCCGCGCCCACACGCCGGCCGCCGAGGGGGCGCTGCGCC GGGGCCTGCTCCGGCTGCGGGGCGGGCGTCTGGACGCCGCCAGGGACGAGGACGGCCGGGCGCTGGAGGCCGCCGTCCTG CGCGCGGCCCGTGGGACGGCGCCGCGTCCGCTGTTGCAGACGCTCGTGCTCCGCGCCCCCGGCGATCCGGCGGCCTTCGA GGTCGTCGACGTCGCCGCGCTGCCGCTCCGTCCCCACGGCCTGGGCTTCGAACCGCGCGCCCTGGTCATCGTCCGCGGGG CGCGCCGCGACGACCAGCTGCCGGAGCTGCTGCGCCAGGTCTTCGGCCTCTCCCCGGCCGAGGCCGACATCGCCGTCCGC CTGGCCCGCGGCGAGTCCCGCGAGGCCGTCGCCGCCCGGCGCGGCGTGTCGCTCGAGACGGTCCGCAGCCAGGTGAAGGC GCTCTTCGCCAAGCTCGACATCGGCCGCGAGGGCGAGCTCGCCGCCCGGCTCGACCGGCTGCGCTAG
Upstream 100 bases:
>100_bases CGGTCGCATAACAAGTTACGCTTCAGGGGGGGGTAAGCGTAATGAGTCCGTGGCTTGGAGGCGTGGTTCCGGGGCGGACG GGCGTCGTCCGCGGCGGCGG
Downstream 100 bases:
>100_bases CTCATCCAGCGGCGCGGGTGCCGCCAGCCCAGTTCGCGCACCTCGCCCGCCGCCAGGCCCAGGGTCCGCATCCGCGCCAG GGTCAGCGGGTTGACCGCCT
Product: transcriptional regulator,LuxR family
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MIANDEHWTAVADLFAAAALDGSWPVALEGLADACGAERGELIGVGADRAVPFNWMTRMDPSGLDEFVGMGGGDPARNPR VRMGLRAPLLASWHDVRCATEDELRRNFDYADYCRRWDIPYGSQSTLMRDDGMLIGLAVLRGERRGVPQAEDRRAFESLV GQVRAAVRTQITLEGQGPALLAGALESAGVAAFVCDGAGRARAHTPAAEGALRRGLLRLRGGRLDAARDEDGRALEAAVL RAARGTAPRPLLQTLVLRAPGDPAAFEVVDVAALPLRPHGLGFEPRALVIVRGARRDDQLPELLRQVFGLSPAEADIAVR LARGESREAVAARRGVSLETVRSQVKALFAKLDIGREGELAARLDRLR
Sequences:
>Translated_368_residues MIANDEHWTAVADLFAAAALDGSWPVALEGLADACGAERGELIGVGADRAVPFNWMTRMDPSGLDEFVGMGGGDPARNPR VRMGLRAPLLASWHDVRCATEDELRRNFDYADYCRRWDIPYGSQSTLMRDDGMLIGLAVLRGERRGVPQAEDRRAFESLV GQVRAAVRTQITLEGQGPALLAGALESAGVAAFVCDGAGRARAHTPAAEGALRRGLLRLRGGRLDAARDEDGRALEAAVL RAARGTAPRPLLQTLVLRAPGDPAAFEVVDVAALPLRPHGLGFEPRALVIVRGARRDDQLPELLRQVFGLSPAEADIAVR LARGESREAVAARRGVSLETVRSQVKALFAKLDIGREGELAARLDRLR >Mature_368_residues MIANDEHWTAVADLFAAAALDGSWPVALEGLADACGAERGELIGVGADRAVPFNWMTRMDPSGLDEFVGMGGGDPARNPR VRMGLRAPLLASWHDVRCATEDELRRNFDYADYCRRWDIPYGSQSTLMRDDGMLIGLAVLRGERRGVPQAEDRRAFESLV GQVRAAVRTQITLEGQGPALLAGALESAGVAAFVCDGAGRARAHTPAAEGALRRGLLRLRGGRLDAARDEDGRALEAAVL RAARGTAPRPLLQTLVLRAPGDPAAFEVVDVAALPLRPHGLGFEPRALVIVRGARRDDQLPELLRQVFGLSPAEADIAVR LARGESREAVAARRGVSLETVRSQVKALFAKLDIGREGELAARLDRLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39565; Mature: 39565
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIANDEHWTAVADLFAAAALDGSWPVALEGLADACGAERGELIGVGADRAVPFNWMTRMD CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHCCC PSGLDEFVGMGGGDPARNPRVRMGLRAPLLASWHDVRCATEDELRRNFDYADYCRRWDIP CCCHHHHHCCCCCCCCCCCCEEECCCCCHHHCCHHCCCCCHHHHHHCCCHHHHHHHCCCC YGSQSTLMRDDGMLIGLAVLRGERRGVPQAEDRRAFESLVGQVRAAVRTQITLEGQGPAL CCCCCCEEECCCCEEEHEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEE LAGALESAGVAAFVCDGAGRARAHTPAAEGALRRGLLRLRGGRLDAARDEDGRALEAAVL EHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH RAARGTAPRPLLQTLVLRAPGDPAAFEVVDVAALPLRPHGLGFEPRALVIVRGARRDDQL HHHCCCCCHHHHHHHHHCCCCCCCCEEEEEHEECCCCCCCCCCCCCEEEEEECCCCCCHH PELLRQVFGLSPAEADIAVRLARGESREAVAARRGVSLETVRSQVKALFAKLDIGREGEL HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCH AARLDRLR HHHHHHCC >Mature Secondary Structure MIANDEHWTAVADLFAAAALDGSWPVALEGLADACGAERGELIGVGADRAVPFNWMTRMD CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHCCC PSGLDEFVGMGGGDPARNPRVRMGLRAPLLASWHDVRCATEDELRRNFDYADYCRRWDIP CCCHHHHHCCCCCCCCCCCCEEECCCCCHHHCCHHCCCCCHHHHHHCCCHHHHHHHCCCC YGSQSTLMRDDGMLIGLAVLRGERRGVPQAEDRRAFESLVGQVRAAVRTQITLEGQGPAL CCCCCCEEECCCCEEEHEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEE LAGALESAGVAAFVCDGAGRARAHTPAAEGALRRGLLRLRGGRLDAARDEDGRALEAAVL EHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH RAARGTAPRPLLQTLVLRAPGDPAAFEVVDVAALPLRPHGLGFEPRALVIVRGARRDDQL HHHCCCCCHHHHHHHHHCCCCCCCCEEEEEHEECCCCCCCCCCCCCEEEEEECCCCCCHH PELLRQVFGLSPAEADIAVRLARGESREAVAARRGVSLETVRSQVKALFAKLDIGREGEL HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCH AARLDRLR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA