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The map label for this gene is cirA [C]

Identifier: 197104469

GI number: 197104469

Start: 1109991

End: 1112675

Strand: Reverse

Name: cirA [C]

Synonym: PHZ_c1003

Alternate gene names: 197104469

Gene position: 1112675-1109991 (Counterclockwise)

Preceding gene: 197104470

Following gene: 197104467

Centisome position: 27.84

GC content: 68.83

Gene sequence:

>2685_bases
ATGCATCGGAACAGGAAGGCGCTCGCCGCAGGCGTTGCGTCGGGGGTCATCGCATTCGTGTTGCTGGGCGGCGCCGCACG
GGCCGAGAACGCGGCGGACGGGCCGGCGGGAGATGCGGTGGACGAGGTGGTCGTCACCGGCTTTCGCGGCTCGCTGGTGG
CCGCGCGCGAGCTGAAGCGCGACGCCGAGATCGCCTCGGACGTGATCGTCGCCGAGGACATGGCCAAGTTCCCCGACCTG
AATCTGGCCGAGTCCCTCCAGCGCCTGCCGGGCGTGGCCATCAACCGCGAGGGCGGCGAGGGCCGCCGGGTCAGCCTGCG
CGGGCTCGGCCCCGACTTCACCCGCGTCCAGCTCAACGGCATGGAGGTGCTGGGCAATGTCGACTCGCCCATGGACAGCC
GGGGTCAGACCTCGCGGGACCGGGCCTTCGACTTCAACGTGTTCGCCTCCGAGCTCTTCACCCGGGTCGAGGTGCGCAAG
TCGTTCTCGGCCGAGCAGGACGAGGGCGGCATGGCCGGAACGGTCGGCCTCTACACCGCCAAGCCGTTCAACTACGACGG
AACCCGCGCGGCGCTGTCGGTCCAGGGCGGGACCAACTCGGCCACCGAGGACCTCCAGCACCGCCTCGCCGGCATGTTCA
GCCGCAACTGGGACGATCGCTTCGGCGTGCTGGTCTCGGCCGCCTGGTCGAAGCGCGAGACCGAGGAGCAGGGCTACAAC
ACCTACAGCGCCAGCGCCGTGACCCCGGGCGCCACCGACCTGTCGCCGCTCAGCGCCTCGGACCGGGCCAAGGTGCAGTC
GGGGACCCTGGTCTTCCAGCGCGGCAACCGCCTGTCGGTCTGGGGCTCGGACCAGGAGCGCCTGGGCCTGACCGCCGCCG
TCCAGTGGCGGCCGATCGACACCCTGACCCTGACCCTGGACGGCCTCTACGGCGAGTTCACCAACGACCGCAGCGAGCTG
CACCTCGCCACCCGCGCCTCGCAGGGGTCAACGGTCCTGGGCGGCGCGGTGCGCCACTCGGGGATCACCAGCCCGCCGCC
GCGGCTCAACGCGGTCCGCTGGGACCAGCACGACTCGGTGCTCTACGCAGACGTGGACAACACGGTCTTCGCCACCGAGA
CCCGGCGGCAGGAGACCAAGAACACCTTCCAGCAGGTGGTGCTGGCCGGCGAATGGGCGCTCACCGAACGCTTCCGGGCC
AGCGGCCACCTGGGCCACGAGCAGTCGGACTACGACATCCCGATGTCGGACAAGTTCTACACCGAGGCGTTCGGCGGCCT
CGTCACCGACTACAGCGCCGACGGACGCGACGCGCGCAACACCTACAGGTGGGACACCACCGACCCGAACAATTTCCGTG
CGCACGAGATCGACTTCTCGGCCACCTACCAGAAGACCCGCCTCGACAACGCCGAGCTGAACCTGGCCTACGAGTTCAGC
GACGCCGCCACGCTCAAGGTCGGCGGCTCGTTCCGCGGCTTCCGCAACTCGGGCTACGCCCAGTCGGCGGACGACCTCTT
GAAGACCGCCTGGGAGACCGGCGCGCTGGACGACCGGGTGAACGACTACTTCCAGGTCTTCGACCGGCACGACGACCAGT
CCTGGGTGATCGTCGACTGGGACAAGGCGCTGGCGAGGTACGGCGTCACGCGCACGGTGGGCGCGCCCCGCTCGATCTAC
GCGGTCGAGGAGGACACCACCGCCGGCTACGCCCAGCTCGACTGGCGCGCCGAGCTCTTCGGTCGCACCGTCCGCGGCAA
CGTCGGCGCGCGCGCCTACGAGACCGAGCTCACCTCGTCGGGCGTCGCCAACGTGGGCCCGGTGACGGTCAGCAACAACT
ATTCGGGCGTGCTGCCGGCGTTCAACGCGGTGATGGAGCTGACGCCGCAGGTCCAGGTGCGGGTCTCGGCGGCCCAGAAC
ATCAACCGCCCCTCGCTCACCGCCTACGCCATGAACGGCTCGGTGAGCCGTGACGCAAACTCGGGCTTCGTCACGGTCAG
CATCGGCAACCCCGAACTCGACCCCTACACCTCCGACGAATTCGACGCCGCGGCCGAATGGTACTTCGGCGGGGTCGGCC
TGCTGGCGGCCGGGGTGTTCCACAAGAGGATCGACGGTTTCGTGGTCAGCGAGCGCGTCACCGACGTGCCGTATTCCTCG
ACCGGCCTTCCCGACAACCTGCTGCCCGGCGTCGCCGGCTCGGCCAACGTCGACGAGTTCACCCGGCCCATCAACCTCAA
CGACGCCGAGCTCACCGGCTTCGAGCTCAGCCTGCAGACCGACTTCTTCTTCCTGCCGGGCTTCCTGCAGGACATGGGGG
TGGTGGCCAACGTCACCTTCATCGACTCGAAGACCACCTATCCGAACGGCCAGACGGGGCCGATCTGGGGGATGAGCGAC
GTCACCCACAACGTCACGCTCTACTACGAGACGGCGAAATGGGGCGCGCGGGTGTCGTCCAACTACCGGTCGGACTATCC
GATCGACCAGGGCGGCTTCCGGTCCACCACCTACGTGGACGCCGCGGCCTTCTATCAGCTCACCGACAAGATCCGGCTGA
CGGTGGACGCCATCAACCTCACCGACGAGCGGGAGATCCAGTTCAACGGCGCCCAGGCCAAGCGCCTGTGGAACGAGACC
TCCAGCGGACGCACCGTCTTCGTCGGCGCGAACGTCCAGTTCTGA

Upstream 100 bases:

>100_bases
CCCTAACGATCAAGCCGGCGTCATCGACGCCGCCTAACGCCGCTCCACCGCCGGACCTCGCCTTGGGGGCCGTCCGGCGC
AGCTGGAGAGTAGGACCATC

Downstream 100 bases:

>100_bases
TCGACCCTGCCGGACACGCCGCCCGTCCCTCTGCGGGGGAGACGGGCGGCTAGTCCAGCGCCCGCTTCAACAGCTCCAGC
GCGGCGGCGGCGAAGGCGCG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Nb-Dependent Receptor; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Subfamily; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Plug; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Subfamily Protein; NB Dependent Receptor; NB-Dependent Receptor-Like Protein; Nucleoside Diphosphate Kinase; Crossover Junction Endodeoxyribonuclease RuvC; Outer Membrane Insertion C-Terminal Signal; NB Dependent Receptor For Iron Chelates; NB-Dependent Receptor Protein; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; NB Dependent Receptor-Related Protein; 3-Dehydroquinate Synthase; Peptidase; Argininosuccinate Synthase; NB-Dependent Receptor Domain Protein

Number of amino acids: Translated: 894; Mature: 894

Protein sequence:

>894_residues
MHRNRKALAAGVASGVIAFVLLGGAARAENAADGPAGDAVDEVVVTGFRGSLVAARELKRDAEIASDVIVAEDMAKFPDL
NLAESLQRLPGVAINREGGEGRRVSLRGLGPDFTRVQLNGMEVLGNVDSPMDSRGQTSRDRAFDFNVFASELFTRVEVRK
SFSAEQDEGGMAGTVGLYTAKPFNYDGTRAALSVQGGTNSATEDLQHRLAGMFSRNWDDRFGVLVSAAWSKRETEEQGYN
TYSASAVTPGATDLSPLSASDRAKVQSGTLVFQRGNRLSVWGSDQERLGLTAAVQWRPIDTLTLTLDGLYGEFTNDRSEL
HLATRASQGSTVLGGAVRHSGITSPPPRLNAVRWDQHDSVLYADVDNTVFATETRRQETKNTFQQVVLAGEWALTERFRA
SGHLGHEQSDYDIPMSDKFYTEAFGGLVTDYSADGRDARNTYRWDTTDPNNFRAHEIDFSATYQKTRLDNAELNLAYEFS
DAATLKVGGSFRGFRNSGYAQSADDLLKTAWETGALDDRVNDYFQVFDRHDDQSWVIVDWDKALARYGVTRTVGAPRSIY
AVEEDTTAGYAQLDWRAELFGRTVRGNVGARAYETELTSSGVANVGPVTVSNNYSGVLPAFNAVMELTPQVQVRVSAAQN
INRPSLTAYAMNGSVSRDANSGFVTVSIGNPELDPYTSDEFDAAAEWYFGGVGLLAAGVFHKRIDGFVVSERVTDVPYSS
TGLPDNLLPGVAGSANVDEFTRPINLNDAELTGFELSLQTDFFFLPGFLQDMGVVANVTFIDSKTTYPNGQTGPIWGMSD
VTHNVTLYYETAKWGARVSSNYRSDYPIDQGGFRSTTYVDAAAFYQLTDKIRLTVDAINLTDEREIQFNGAQAKRLWNET
SSGRTVFVGANVQF

Sequences:

>Translated_894_residues
MHRNRKALAAGVASGVIAFVLLGGAARAENAADGPAGDAVDEVVVTGFRGSLVAARELKRDAEIASDVIVAEDMAKFPDL
NLAESLQRLPGVAINREGGEGRRVSLRGLGPDFTRVQLNGMEVLGNVDSPMDSRGQTSRDRAFDFNVFASELFTRVEVRK
SFSAEQDEGGMAGTVGLYTAKPFNYDGTRAALSVQGGTNSATEDLQHRLAGMFSRNWDDRFGVLVSAAWSKRETEEQGYN
TYSASAVTPGATDLSPLSASDRAKVQSGTLVFQRGNRLSVWGSDQERLGLTAAVQWRPIDTLTLTLDGLYGEFTNDRSEL
HLATRASQGSTVLGGAVRHSGITSPPPRLNAVRWDQHDSVLYADVDNTVFATETRRQETKNTFQQVVLAGEWALTERFRA
SGHLGHEQSDYDIPMSDKFYTEAFGGLVTDYSADGRDARNTYRWDTTDPNNFRAHEIDFSATYQKTRLDNAELNLAYEFS
DAATLKVGGSFRGFRNSGYAQSADDLLKTAWETGALDDRVNDYFQVFDRHDDQSWVIVDWDKALARYGVTRTVGAPRSIY
AVEEDTTAGYAQLDWRAELFGRTVRGNVGARAYETELTSSGVANVGPVTVSNNYSGVLPAFNAVMELTPQVQVRVSAAQN
INRPSLTAYAMNGSVSRDANSGFVTVSIGNPELDPYTSDEFDAAAEWYFGGVGLLAAGVFHKRIDGFVVSERVTDVPYSS
TGLPDNLLPGVAGSANVDEFTRPINLNDAELTGFELSLQTDFFFLPGFLQDMGVVANVTFIDSKTTYPNGQTGPIWGMSD
VTHNVTLYYETAKWGARVSSNYRSDYPIDQGGFRSTTYVDAAAFYQLTDKIRLTVDAINLTDEREIQFNGAQAKRLWNET
SSGRTVFVGANVQF
>Mature_894_residues
MHRNRKALAAGVASGVIAFVLLGGAARAENAADGPAGDAVDEVVVTGFRGSLVAARELKRDAEIASDVIVAEDMAKFPDL
NLAESLQRLPGVAINREGGEGRRVSLRGLGPDFTRVQLNGMEVLGNVDSPMDSRGQTSRDRAFDFNVFASELFTRVEVRK
SFSAEQDEGGMAGTVGLYTAKPFNYDGTRAALSVQGGTNSATEDLQHRLAGMFSRNWDDRFGVLVSAAWSKRETEEQGYN
TYSASAVTPGATDLSPLSASDRAKVQSGTLVFQRGNRLSVWGSDQERLGLTAAVQWRPIDTLTLTLDGLYGEFTNDRSEL
HLATRASQGSTVLGGAVRHSGITSPPPRLNAVRWDQHDSVLYADVDNTVFATETRRQETKNTFQQVVLAGEWALTERFRA
SGHLGHEQSDYDIPMSDKFYTEAFGGLVTDYSADGRDARNTYRWDTTDPNNFRAHEIDFSATYQKTRLDNAELNLAYEFS
DAATLKVGGSFRGFRNSGYAQSADDLLKTAWETGALDDRVNDYFQVFDRHDDQSWVIVDWDKALARYGVTRTVGAPRSIY
AVEEDTTAGYAQLDWRAELFGRTVRGNVGARAYETELTSSGVANVGPVTVSNNYSGVLPAFNAVMELTPQVQVRVSAAQN
INRPSLTAYAMNGSVSRDANSGFVTVSIGNPELDPYTSDEFDAAAEWYFGGVGLLAAGVFHKRIDGFVVSERVTDVPYSS
TGLPDNLLPGVAGSANVDEFTRPINLNDAELTGFELSLQTDFFFLPGFLQDMGVVANVTFIDSKTTYPNGQTGPIWGMSD
VTHNVTLYYETAKWGARVSSNYRSDYPIDQGGFRSTTYVDAAAFYQLTDKIRLTVDAINLTDEREIQFNGAQAKRLWNET
SSGRTVFVGANVQF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97644; Mature: 97644

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRNRKALAAGVASGVIAFVLLGGAARAENAADGPAGDAVDEVVVTGFRGSLVAARELKR
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHEECCCCCHHHHHHHHH
DAEIASDVIVAEDMAKFPDLNLAESLQRLPGVAINREGGEGRRVSLRGLGPDFTRVQLNG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCEEEEECC
MEVLGNVDSPMDSRGQTSRDRAFDFNVFASELFTRVEVRKSFSAEQDEGGMAGTVGLYTA
EEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEC
KPFNYDGTRAALSVQGGTNSATEDLQHRLAGMFSRNWDDRFGVLVSAAWSKRETEEQGYN
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHCCCCHHHHCCC
TYSASAVTPGATDLSPLSASDRAKVQSGTLVFQRGNRLSVWGSDQERLGLTAAVQWRPID
EEECCCCCCCCCCCCCCCCCCCCEECCCEEEEECCCEEEEECCCHHHCCEEEEEEEECCC
TLTLTLDGLYGEFTNDRSELHLATRASQGSTVLGGAVRHSGITSPPPRLNAVRWDQHDSV
EEEEEEECCCCCCCCCCCEEEEEEECCCCCEEECCHHHHCCCCCCCCCCCEEEECCCCCE
LYADVDNTVFATETRRQETKNTFQQVVLAGEWALTERFRASGHLGHEQSDYDIPMSDKFY
EEEECCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
TEAFGGLVTDYSADGRDARNTYRWDTTDPNNFRAHEIDFSATYQKTRLDNAELNLAYEFS
HHHHCCEEECCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCHHHHCCCCCEEEEEEEEC
DAATLKVGGSFRGFRNSGYAQSADDLLKTAWETGALDDRVNDYFQVFDRHDDQSWVIVDW
CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEH
DKALARYGVTRTVGAPRSIYAVEEDTTAGYAQLDWRAELFGRTVRGNVGARAYETELTSS
HHHHHHCCCCEECCCCCEEEEEECCCCCCEEEECEEHHHCCCEECCCCCCEEEECHHCCC
GVANVGPVTVSNNYSGVLPAFNAVMELTPQVQVRVSAAQNINRPSLTAYAMNGSVSRDAN
CCCCCCCEEECCCCCCCHHHHHHHHHCCCCEEEEEEHHHCCCCCCEEEEEECCCCCCCCC
SGFVTVSIGNPELDPYTSDEFDAAAEWYFGGVGLLAAGVFHKRIDGFVVSERVTDVPYSS
CCEEEEEECCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCEEEECHHCCCCCCC
TGLPDNLLPGVAGSANVDEFTRPINLNDAELTGFELSLQTDFFFLPGFLQDMGVVANVTF
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEEEEECCEEECCHHHHCCCEEEEEEE
IDSKTTYPNGQTGPIWGMSDVTHNVTLYYETAKWGARVSSNYRSDYPIDQGGFRSTTYVD
EECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCEEEH
AAAFYQLTDKIRLTVDAINLTDEREIQFNGAQAKRLWNETSSGRTVFVGANVQF
HHHHHHCCCEEEEEEEEECCCCCCEEEECCHHHHHHHCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MHRNRKALAAGVASGVIAFVLLGGAARAENAADGPAGDAVDEVVVTGFRGSLVAARELKR
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHEECCCCCHHHHHHHHH
DAEIASDVIVAEDMAKFPDLNLAESLQRLPGVAINREGGEGRRVSLRGLGPDFTRVQLNG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCEEEEECC
MEVLGNVDSPMDSRGQTSRDRAFDFNVFASELFTRVEVRKSFSAEQDEGGMAGTVGLYTA
EEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEC
KPFNYDGTRAALSVQGGTNSATEDLQHRLAGMFSRNWDDRFGVLVSAAWSKRETEEQGYN
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHCCCCHHHHCCC
TYSASAVTPGATDLSPLSASDRAKVQSGTLVFQRGNRLSVWGSDQERLGLTAAVQWRPID
EEECCCCCCCCCCCCCCCCCCCCEECCCEEEEECCCEEEEECCCHHHCCEEEEEEEECCC
TLTLTLDGLYGEFTNDRSELHLATRASQGSTVLGGAVRHSGITSPPPRLNAVRWDQHDSV
EEEEEEECCCCCCCCCCCEEEEEEECCCCCEEECCHHHHCCCCCCCCCCCEEEECCCCCE
LYADVDNTVFATETRRQETKNTFQQVVLAGEWALTERFRASGHLGHEQSDYDIPMSDKFY
EEEECCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
TEAFGGLVTDYSADGRDARNTYRWDTTDPNNFRAHEIDFSATYQKTRLDNAELNLAYEFS
HHHHCCEEECCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCHHHHCCCCCEEEEEEEEC
DAATLKVGGSFRGFRNSGYAQSADDLLKTAWETGALDDRVNDYFQVFDRHDDQSWVIVDW
CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEH
DKALARYGVTRTVGAPRSIYAVEEDTTAGYAQLDWRAELFGRTVRGNVGARAYETELTSS
HHHHHHCCCCEECCCCCEEEEEECCCCCCEEEECEEHHHCCCEECCCCCCEEEECHHCCC
GVANVGPVTVSNNYSGVLPAFNAVMELTPQVQVRVSAAQNINRPSLTAYAMNGSVSRDAN
CCCCCCCEEECCCCCCCHHHHHHHHHCCCCEEEEEEHHHCCCCCCEEEEEECCCCCCCCC
SGFVTVSIGNPELDPYTSDEFDAAAEWYFGGVGLLAAGVFHKRIDGFVVSERVTDVPYSS
CCEEEEEECCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCEEEECHHCCCCCCC
TGLPDNLLPGVAGSANVDEFTRPINLNDAELTGFELSLQTDFFFLPGFLQDMGVVANVTF
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEEEEECCEEECCHHHHCCCEEEEEEE
IDSKTTYPNGQTGPIWGMSDVTHNVTLYYETAKWGARVSSNYRSDYPIDQGGFRSTTYVD
EECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCEEEH
AAAFYQLTDKIRLTVDAINLTDEREIQFNGAQAKRLWNETSSGRTVFVGANVQF
HHHHHHCCCEEEEEEEEECCCCCCEEEECCHHHHHHHCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA