Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is ampH [C]

Identifier: 197104467

GI number: 197104467

Start: 1108135

End: 1109535

Strand: Reverse

Name: ampH [C]

Synonym: PHZ_c1001

Alternate gene names: 197104467

Gene position: 1109535-1108135 (Counterclockwise)

Preceding gene: 197104469

Following gene: 197104466

Centisome position: 27.76

GC content: 67.67

Gene sequence:

>1401_bases
TTGACGGCCACCCGCTCGCCGCGGGCCTTGAGCCGATCGCCCACCTCGGCCGCCAGCCGTTCCAGCTCTTCCATCCGCGT
TCCCTCCCCCTGCCTCTCGACGTACCGCGCCTTCGGCGGCCATGATGGCCCGATTGAAGACACAAGAGCATACTGCGGGA
GGATTTCGATGGACGCCCAATCCCAGTGGACGGGCCTGGACGCGGGCCGCCTGGAGCGGATCACCGACCACATCGAGCGC
AACTACATCGAGCCGGGCAAGATCGCCGGCTGCCAGGTGAGCGTCGCCCGGCACGGCCACCTCGCCTACTTCCGCTCGTT
CGGGCTGATGGACCGCGAGCGGAACAGGCCCACGCGCGACGACACGATCTACCGCATCTATTCGATGACCAAGCCGATCA
CCTCGGTCGCGCTGATGACGCTCTACGAGCAGGGCCATTTCCAGCTCAACGATCCGGTCAGCCGCTTCGTCCCCTCGTGG
AAGGACCACCGCGTCTGGACCGCGGGCGAGGGCGATACGATGTCCACCGAGCCCGCGCACCGGCCGGTCAGCTTCCGCGA
CGTGCTGACCCACATGGCTGGCTTCACCTACGGCGGCGGGCTGCCGGGCGTGGGCGTCCAGCACCCGATCGACCACATCT
ACCGCGGGCTGAAGGTCCGCTCGTTCGGCAGCCAGGACAGCATGCAGGTCTTCCTGGACAAGCTCGGCCAGGTGCCGCTG
CGCTACCAGCCGGGCACGGCCTGGATGTACTCTCTGGCGACCGACGTGTGCGGGGCGCTGGTCGAGCTCATCTCGGGCAA
GCCGTTCGCCGAGTACCTGCAGGAGACGATCTTCGAGCCGCTGGGGATGAAGGACACCGCCTTCTTCGTGCCCCCGGAGA
AGCAGGACCGCTTCGCCGCCAACTACCAGCGGATGCCCGACAAGACGCTGAAGCTGATCGACGATCCCGAGACCAGCCAC
TACCTCGCCGATCCGGGGTTCAAGTCGGGGGGCGGCGGGCTCGTGGGGACCAGCGCCGACTACCTGCGCTTCTGCGAGAT
GCTGCGCCGGGGCGGCGAGCTGGACGGCCAGCGGGTGATTGGCCCGCGCACCCTCGAGCTGATGCACATGAACCACCTGC
CCGGCGGCCAGGACCTGACCCAGGTGGCGCTCGGCACGTTCTCCGAGACCGCCAACGAGGGCGTGGGCTTCGGCCTCGGC
TTCGCCTCCACCCAGGGCCAGGTGCAAACCGGAACGCTCGGCGCCGGCGACTACTACTGGGGCGGCGCGGCCTCGACGAT
CTTCTGGGTCGACCCGAAGGAGGATCTCTGCGTCGTCTTCATGACCCAGCTGATGCCGTCGGGGACCTTCAACTTCCGCG
GCCAGCTGAAGAGCATCGTGTACAGCTCGATCATCGACTAG

Upstream 100 bases:

>100_bases
GGCCTTGGGCGTGTAGACCACCGCCCCGCCGAGGTAGTAGGCGCTGGCGCCGGCCACGCTCAGCAGCGCCGCCGAGACCA
GCCCGCCCGAGGAGCTCTCG

Downstream 100 bases:

>100_bases
GCGGCCGGGCGGGGGTATAGCCCCCGCCATGCCCATGGCCCTCGAAGACTTGGAAGCCGCACTGCGCGAAGGCTTCCCCG
ACGCCGACATCCAGATCCAG

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MTATRSPRALSRSPTSAASRSSSSIRVPSPCLSTYRAFGGHDGPIEDTRAYCGRISMDAQSQWTGLDAGRLERITDHIER
NYIEPGKIAGCQVSVARHGHLAYFRSFGLMDRERNRPTRDDTIYRIYSMTKPITSVALMTLYEQGHFQLNDPVSRFVPSW
KDHRVWTAGEGDTMSTEPAHRPVSFRDVLTHMAGFTYGGGLPGVGVQHPIDHIYRGLKVRSFGSQDSMQVFLDKLGQVPL
RYQPGTAWMYSLATDVCGALVELISGKPFAEYLQETIFEPLGMKDTAFFVPPEKQDRFAANYQRMPDKTLKLIDDPETSH
YLADPGFKSGGGGLVGTSADYLRFCEMLRRGGELDGQRVIGPRTLELMHMNHLPGGQDLTQVALGTFSETANEGVGFGLG
FASTQGQVQTGTLGAGDYYWGGAASTIFWVDPKEDLCVVFMTQLMPSGTFNFRGQLKSIVYSSIID

Sequences:

>Translated_466_residues
MTATRSPRALSRSPTSAASRSSSSIRVPSPCLSTYRAFGGHDGPIEDTRAYCGRISMDAQSQWTGLDAGRLERITDHIER
NYIEPGKIAGCQVSVARHGHLAYFRSFGLMDRERNRPTRDDTIYRIYSMTKPITSVALMTLYEQGHFQLNDPVSRFVPSW
KDHRVWTAGEGDTMSTEPAHRPVSFRDVLTHMAGFTYGGGLPGVGVQHPIDHIYRGLKVRSFGSQDSMQVFLDKLGQVPL
RYQPGTAWMYSLATDVCGALVELISGKPFAEYLQETIFEPLGMKDTAFFVPPEKQDRFAANYQRMPDKTLKLIDDPETSH
YLADPGFKSGGGGLVGTSADYLRFCEMLRRGGELDGQRVIGPRTLELMHMNHLPGGQDLTQVALGTFSETANEGVGFGLG
FASTQGQVQTGTLGAGDYYWGGAASTIFWVDPKEDLCVVFMTQLMPSGTFNFRGQLKSIVYSSIID
>Mature_465_residues
TATRSPRALSRSPTSAASRSSSSIRVPSPCLSTYRAFGGHDGPIEDTRAYCGRISMDAQSQWTGLDAGRLERITDHIERN
YIEPGKIAGCQVSVARHGHLAYFRSFGLMDRERNRPTRDDTIYRIYSMTKPITSVALMTLYEQGHFQLNDPVSRFVPSWK
DHRVWTAGEGDTMSTEPAHRPVSFRDVLTHMAGFTYGGGLPGVGVQHPIDHIYRGLKVRSFGSQDSMQVFLDKLGQVPLR
YQPGTAWMYSLATDVCGALVELISGKPFAEYLQETIFEPLGMKDTAFFVPPEKQDRFAANYQRMPDKTLKLIDDPETSHY
LADPGFKSGGGGLVGTSADYLRFCEMLRRGGELDGQRVIGPRTLELMHMNHLPGGQDLTQVALGTFSETANEGVGFGLGF
ASTQGQVQTGTLGAGDYYWGGAASTIFWVDPKEDLCVVFMTQLMPSGTFNFRGQLKSIVYSSIID

Specific function: Binds Penicillin And Contributes To The Normal Morphology Of Escherichia Coli. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082101, Length=341, Percent_Identity=23.7536656891496, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 51453; Mature: 51322

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATRSPRALSRSPTSAASRSSSSIRVPSPCLSTYRAFGGHDGPIEDTRAYCGRISMDAQ
CCCCCCCCHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC
SQWTGLDAGRLERITDHIERNYIEPGKIAGCQVSVARHGHLAYFRSFGLMDRERNRPTRD
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCHHHHHHHHCCCCHHCCCCCCC
DTIYRIYSMTKPITSVALMTLYEQGHFQLNDPVSRFVPSWKDHRVWTAGEGDTMSTEPAH
CCEEEEHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCEEEECCCCCCCCCCCCC
RPVSFRDVLTHMAGFTYGGGLPGVGVQHPIDHIYRGLKVRSFGSQDSMQVFLDKLGQVPL
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEECCCCCHHHHHHHHHHCCCCE
RYQPGTAWMYSLATDVCGALVELISGKPFAEYLQETIFEPLGMKDTAFFVPPEKQDRFAA
EECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHH
NYQRMPDKTLKLIDDPETSHYLADPGFKSGGGGLVGTSADYLRFCEMLRRGGELDGQRVI
HHHHCCHHHHHEECCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEC
GPRTLELMHMNHLPGGQDLTQVALGTFSETANEGVGFGLGFASTQGQVQTGTLGAGDYYW
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEECCCCCCCCCC
GGAASTIFWVDPKEDLCVVFMTQLMPSGTFNFRGQLKSIVYSSIID
CCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TATRSPRALSRSPTSAASRSSSSIRVPSPCLSTYRAFGGHDGPIEDTRAYCGRISMDAQ
CCCCCCCHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC
SQWTGLDAGRLERITDHIERNYIEPGKIAGCQVSVARHGHLAYFRSFGLMDRERNRPTRD
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCHHHHHHHHCCCCHHCCCCCCC
DTIYRIYSMTKPITSVALMTLYEQGHFQLNDPVSRFVPSWKDHRVWTAGEGDTMSTEPAH
CCEEEEHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCEEEECCCCCCCCCCCCC
RPVSFRDVLTHMAGFTYGGGLPGVGVQHPIDHIYRGLKVRSFGSQDSMQVFLDKLGQVPL
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEECCCCCHHHHHHHHHHCCCCE
RYQPGTAWMYSLATDVCGALVELISGKPFAEYLQETIFEPLGMKDTAFFVPPEKQDRFAA
EECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHH
NYQRMPDKTLKLIDDPETSHYLADPGFKSGGGGLVGTSADYLRFCEMLRRGGELDGQRVI
HHHHCCHHHHHEECCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEC
GPRTLELMHMNHLPGGQDLTQVALGTFSETANEGVGFGLGFASTQGQVQTGTLGAGDYYW
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEECCCCCCCCCC
GGAASTIFWVDPKEDLCVVFMTQLMPSGTFNFRGQLKSIVYSSIID
CCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]