| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ampH [C]
Identifier: 197104467
GI number: 197104467
Start: 1108135
End: 1109535
Strand: Reverse
Name: ampH [C]
Synonym: PHZ_c1001
Alternate gene names: 197104467
Gene position: 1109535-1108135 (Counterclockwise)
Preceding gene: 197104469
Following gene: 197104466
Centisome position: 27.76
GC content: 67.67
Gene sequence:
>1401_bases TTGACGGCCACCCGCTCGCCGCGGGCCTTGAGCCGATCGCCCACCTCGGCCGCCAGCCGTTCCAGCTCTTCCATCCGCGT TCCCTCCCCCTGCCTCTCGACGTACCGCGCCTTCGGCGGCCATGATGGCCCGATTGAAGACACAAGAGCATACTGCGGGA GGATTTCGATGGACGCCCAATCCCAGTGGACGGGCCTGGACGCGGGCCGCCTGGAGCGGATCACCGACCACATCGAGCGC AACTACATCGAGCCGGGCAAGATCGCCGGCTGCCAGGTGAGCGTCGCCCGGCACGGCCACCTCGCCTACTTCCGCTCGTT CGGGCTGATGGACCGCGAGCGGAACAGGCCCACGCGCGACGACACGATCTACCGCATCTATTCGATGACCAAGCCGATCA CCTCGGTCGCGCTGATGACGCTCTACGAGCAGGGCCATTTCCAGCTCAACGATCCGGTCAGCCGCTTCGTCCCCTCGTGG AAGGACCACCGCGTCTGGACCGCGGGCGAGGGCGATACGATGTCCACCGAGCCCGCGCACCGGCCGGTCAGCTTCCGCGA CGTGCTGACCCACATGGCTGGCTTCACCTACGGCGGCGGGCTGCCGGGCGTGGGCGTCCAGCACCCGATCGACCACATCT ACCGCGGGCTGAAGGTCCGCTCGTTCGGCAGCCAGGACAGCATGCAGGTCTTCCTGGACAAGCTCGGCCAGGTGCCGCTG CGCTACCAGCCGGGCACGGCCTGGATGTACTCTCTGGCGACCGACGTGTGCGGGGCGCTGGTCGAGCTCATCTCGGGCAA GCCGTTCGCCGAGTACCTGCAGGAGACGATCTTCGAGCCGCTGGGGATGAAGGACACCGCCTTCTTCGTGCCCCCGGAGA AGCAGGACCGCTTCGCCGCCAACTACCAGCGGATGCCCGACAAGACGCTGAAGCTGATCGACGATCCCGAGACCAGCCAC TACCTCGCCGATCCGGGGTTCAAGTCGGGGGGCGGCGGGCTCGTGGGGACCAGCGCCGACTACCTGCGCTTCTGCGAGAT GCTGCGCCGGGGCGGCGAGCTGGACGGCCAGCGGGTGATTGGCCCGCGCACCCTCGAGCTGATGCACATGAACCACCTGC CCGGCGGCCAGGACCTGACCCAGGTGGCGCTCGGCACGTTCTCCGAGACCGCCAACGAGGGCGTGGGCTTCGGCCTCGGC TTCGCCTCCACCCAGGGCCAGGTGCAAACCGGAACGCTCGGCGCCGGCGACTACTACTGGGGCGGCGCGGCCTCGACGAT CTTCTGGGTCGACCCGAAGGAGGATCTCTGCGTCGTCTTCATGACCCAGCTGATGCCGTCGGGGACCTTCAACTTCCGCG GCCAGCTGAAGAGCATCGTGTACAGCTCGATCATCGACTAG
Upstream 100 bases:
>100_bases GGCCTTGGGCGTGTAGACCACCGCCCCGCCGAGGTAGTAGGCGCTGGCGCCGGCCACGCTCAGCAGCGCCGCCGAGACCA GCCCGCCCGAGGAGCTCTCG
Downstream 100 bases:
>100_bases GCGGCCGGGCGGGGGTATAGCCCCCGCCATGCCCATGGCCCTCGAAGACTTGGAAGCCGCACTGCGCGAAGGCTTCCCCG ACGCCGACATCCAGATCCAG
Product: beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MTATRSPRALSRSPTSAASRSSSSIRVPSPCLSTYRAFGGHDGPIEDTRAYCGRISMDAQSQWTGLDAGRLERITDHIER NYIEPGKIAGCQVSVARHGHLAYFRSFGLMDRERNRPTRDDTIYRIYSMTKPITSVALMTLYEQGHFQLNDPVSRFVPSW KDHRVWTAGEGDTMSTEPAHRPVSFRDVLTHMAGFTYGGGLPGVGVQHPIDHIYRGLKVRSFGSQDSMQVFLDKLGQVPL RYQPGTAWMYSLATDVCGALVELISGKPFAEYLQETIFEPLGMKDTAFFVPPEKQDRFAANYQRMPDKTLKLIDDPETSH YLADPGFKSGGGGLVGTSADYLRFCEMLRRGGELDGQRVIGPRTLELMHMNHLPGGQDLTQVALGTFSETANEGVGFGLG FASTQGQVQTGTLGAGDYYWGGAASTIFWVDPKEDLCVVFMTQLMPSGTFNFRGQLKSIVYSSIID
Sequences:
>Translated_466_residues MTATRSPRALSRSPTSAASRSSSSIRVPSPCLSTYRAFGGHDGPIEDTRAYCGRISMDAQSQWTGLDAGRLERITDHIER NYIEPGKIAGCQVSVARHGHLAYFRSFGLMDRERNRPTRDDTIYRIYSMTKPITSVALMTLYEQGHFQLNDPVSRFVPSW KDHRVWTAGEGDTMSTEPAHRPVSFRDVLTHMAGFTYGGGLPGVGVQHPIDHIYRGLKVRSFGSQDSMQVFLDKLGQVPL RYQPGTAWMYSLATDVCGALVELISGKPFAEYLQETIFEPLGMKDTAFFVPPEKQDRFAANYQRMPDKTLKLIDDPETSH YLADPGFKSGGGGLVGTSADYLRFCEMLRRGGELDGQRVIGPRTLELMHMNHLPGGQDLTQVALGTFSETANEGVGFGLG FASTQGQVQTGTLGAGDYYWGGAASTIFWVDPKEDLCVVFMTQLMPSGTFNFRGQLKSIVYSSIID >Mature_465_residues TATRSPRALSRSPTSAASRSSSSIRVPSPCLSTYRAFGGHDGPIEDTRAYCGRISMDAQSQWTGLDAGRLERITDHIERN YIEPGKIAGCQVSVARHGHLAYFRSFGLMDRERNRPTRDDTIYRIYSMTKPITSVALMTLYEQGHFQLNDPVSRFVPSWK DHRVWTAGEGDTMSTEPAHRPVSFRDVLTHMAGFTYGGGLPGVGVQHPIDHIYRGLKVRSFGSQDSMQVFLDKLGQVPLR YQPGTAWMYSLATDVCGALVELISGKPFAEYLQETIFEPLGMKDTAFFVPPEKQDRFAANYQRMPDKTLKLIDDPETSHY LADPGFKSGGGGLVGTSADYLRFCEMLRRGGELDGQRVIGPRTLELMHMNHLPGGQDLTQVALGTFSETANEGVGFGLGF ASTQGQVQTGTLGAGDYYWGGAASTIFWVDPKEDLCVVFMTQLMPSGTFNFRGQLKSIVYSSIID
Specific function: Binds Penicillin And Contributes To The Normal Morphology Of Escherichia Coli. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082101, Length=341, Percent_Identity=23.7536656891496, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 51453; Mature: 51322
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATRSPRALSRSPTSAASRSSSSIRVPSPCLSTYRAFGGHDGPIEDTRAYCGRISMDAQ CCCCCCCCHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC SQWTGLDAGRLERITDHIERNYIEPGKIAGCQVSVARHGHLAYFRSFGLMDRERNRPTRD CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCHHHHHHHHCCCCHHCCCCCCC DTIYRIYSMTKPITSVALMTLYEQGHFQLNDPVSRFVPSWKDHRVWTAGEGDTMSTEPAH CCEEEEHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCEEEECCCCCCCCCCCCC RPVSFRDVLTHMAGFTYGGGLPGVGVQHPIDHIYRGLKVRSFGSQDSMQVFLDKLGQVPL CCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEECCCCCHHHHHHHHHHCCCCE RYQPGTAWMYSLATDVCGALVELISGKPFAEYLQETIFEPLGMKDTAFFVPPEKQDRFAA EECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHH NYQRMPDKTLKLIDDPETSHYLADPGFKSGGGGLVGTSADYLRFCEMLRRGGELDGQRVI HHHHCCHHHHHEECCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEC GPRTLELMHMNHLPGGQDLTQVALGTFSETANEGVGFGLGFASTQGQVQTGTLGAGDYYW CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEECCCCCCCCCC GGAASTIFWVDPKEDLCVVFMTQLMPSGTFNFRGQLKSIVYSSIID CCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TATRSPRALSRSPTSAASRSSSSIRVPSPCLSTYRAFGGHDGPIEDTRAYCGRISMDAQ CCCCCCCHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC SQWTGLDAGRLERITDHIERNYIEPGKIAGCQVSVARHGHLAYFRSFGLMDRERNRPTRD CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCHHHHHHHHCCCCHHCCCCCCC DTIYRIYSMTKPITSVALMTLYEQGHFQLNDPVSRFVPSWKDHRVWTAGEGDTMSTEPAH CCEEEEHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCEEEECCCCCCCCCCCCC RPVSFRDVLTHMAGFTYGGGLPGVGVQHPIDHIYRGLKVRSFGSQDSMQVFLDKLGQVPL CCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEECCCCCHHHHHHHHHHCCCCE RYQPGTAWMYSLATDVCGALVELISGKPFAEYLQETIFEPLGMKDTAFFVPPEKQDRFAA EECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHH NYQRMPDKTLKLIDDPETSHYLADPGFKSGGGGLVGTSADYLRFCEMLRRGGELDGQRVI HHHHCCHHHHHEECCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEC GPRTLELMHMNHLPGGQDLTQVALGTFSETANEGVGFGLGFASTQGQVQTGTLGAGDYYW CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEECCCCCCCCCC GGAASTIFWVDPKEDLCVVFMTQLMPSGTFNFRGQLKSIVYSSIID CCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]