| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104466
Identifier: 197104466
GI number: 197104466
Start: 1107873
End: 1108106
Strand: Reverse
Name: 197104466
Synonym: PHZ_c1000
Alternate gene names: NA
Gene position: 1108106-1107873 (Counterclockwise)
Preceding gene: 197104467
Following gene: 197104465
Centisome position: 27.73
GC content: 70.51
Gene sequence:
>234_bases ATGCCCATGGCCCTCGAAGACTTGGAAGCCGCACTGCGCGAAGGCTTCCCCGACGCCGACATCCAGATCCAGGACCTGGC CGGCGACGGCGACCACTACCGCGCCCGCATCGTGTCCAAGGCCTTCGCCGGTCTGCCGCGCGTGCGCCAACACCAGCTGG TCTACGCCGCGCTGAAGGGCAGGATGGGCGGCGAACTGCACGCGCTGGCGCTCGAGACCTCCGCCCCCGGCTAG
Upstream 100 bases:
>100_bases CTGATGCCGTCGGGGACCTTCAACTTCCGCGGCCAGCTGAAGAGCATCGTGTACAGCTCGATCATCGACTAGGCGGCCGG GCGGGGGTATAGCCCCCGCC
Downstream 100 bases:
>100_bases CGCGCCGTCCTGACACGCTTGACCCTGAGGGTCCCCGTCCCTAGCTCTTGGCCAGCCAATTTGCGCCGAAAGGGCGAGCT GATGACCGACGCTGCGACCG
Product: stress-induced morphogen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MPMALEDLEAALREGFPDADIQIQDLAGDGDHYRARIVSKAFAGLPRVRQHQLVYAALKGRMGGELHALALETSAPG
Sequences:
>Translated_77_residues MPMALEDLEAALREGFPDADIQIQDLAGDGDHYRARIVSKAFAGLPRVRQHQLVYAALKGRMGGELHALALETSAPG >Mature_76_residues PMALEDLEAALREGFPDADIQIQDLAGDGDHYRARIVSKAFAGLPRVRQHQLVYAALKGRMGGELHALALETSAPG
Specific function: Unknown
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 8299; Mature: 8167
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMALEDLEAALREGFPDADIQIQDLAGDGDHYRARIVSKAFAGLPRVRQHQLVYAALKG CCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHC RMGGELHALALETSAPG CCCCCEEEEEECCCCCC >Mature Secondary Structure PMALEDLEAALREGFPDADIQIQDLAGDGDHYRARIVSKAFAGLPRVRQHQLVYAALKG CCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHC RMGGELHALALETSAPG CCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]