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The map label for this gene is 197104416

Identifier: 197104416

GI number: 197104416

Start: 1045842

End: 1046558

Strand: Reverse

Name: 197104416

Synonym: PHZ_c0950

Alternate gene names: NA

Gene position: 1046558-1045842 (Counterclockwise)

Preceding gene: 197104417

Following gene: 197104413

Centisome position: 26.19

GC content: 77.55

Gene sequence:

>717_bases
ATGCGCAAGATCCTGACCGCCGCGCTATGCGGCGCGCTGGCCGCCCCCGCGGGCGCCGCCGCCGCCCTGGGGCAGGTCCT
CCCCGGCGCGCCCCCCGCGCCGCAGACGCCGGCGCCGCCGGCCCCCGACATCCTTATCATCCCCGAGACTCCGGCGCCCC
CGCCTGCGGAGCCTCTCCCCGCCATGCCTGCCGGCCCGGCGCTCGGCGATCCCGCGCCGCCGCCCCCGCCGGCAGAGGAC
GGGGACGAGGACGGCGAAAAAGAGAAGAAAAAGAAGCTCGTCACCAAGGAGAAGGCCGGCGGCGCCGTGGGCGGCCTGCT
GGGCGGCCTGGCCGGGGCGGCGGGCGGGCCGCTGGGCAAGATCGCCGGCAGCTTCGTGGGCAAGCAGATCGGCAAGGCCG
TCATGGACGGCGATGACGACGATGAGAAGGACGACAAGGGCAAGGACCGCGAGGACAAGGACGTGGACGCCCCCGTCCTG
CAGGTCGAGGCCCCGCCGCCTCCGCCGCCCGCCGCCGGCGACGCCGCGGTGCTGACGGCCGCCGCCGAGGCGGCGCCCGG
CGCGGACCCGGCCCAAGTGGCCGCCACCCCGCCCCTCGCACCTCTGGCGCCGACAGATACGACGGCGTTGGTCGCCCCCG
GCGAGGACCCTGCGGGCCTCGCGGGGGACATTCCGCCGCCCGAACCGGTCCCGGGGTCCGGACCGCCGCTCGGCTAG

Upstream 100 bases:

>100_bases
GGCCTGGACGACCAGGCCCGTTTCCAGCCGTGCTGAAACGCGCGCGGGCGCAAGGCGTTGATCGTCCTCGAATTCGAGGG
ACCGCCTTGAAGGAGCCCAT

Downstream 100 bases:

>100_bases
CGGACGGGGTTCGGGCGGGCCGCGCCCCCGCCAGGCAGTTCGACGCTGTAGGGTCCGAACCGCGGGTCCGGCTCCATGTA
GTCGGTGGAGACGTACTGCG

Product: transcriptional regulator cold shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MRKILTAALCGALAAPAGAAAALGQVLPGAPPAPQTPAPPAPDILIIPETPAPPPAEPLPAMPAGPALGDPAPPPPPAED
GDEDGEKEKKKKLVTKEKAGGAVGGLLGGLAGAAGGPLGKIAGSFVGKQIGKAVMDGDDDDEKDDKGKDREDKDVDAPVL
QVEAPPPPPPAAGDAAVLTAAAEAAPGADPAQVAATPPLAPLAPTDTTALVAPGEDPAGLAGDIPPPEPVPGSGPPLG

Sequences:

>Translated_238_residues
MRKILTAALCGALAAPAGAAAALGQVLPGAPPAPQTPAPPAPDILIIPETPAPPPAEPLPAMPAGPALGDPAPPPPPAED
GDEDGEKEKKKKLVTKEKAGGAVGGLLGGLAGAAGGPLGKIAGSFVGKQIGKAVMDGDDDDEKDDKGKDREDKDVDAPVL
QVEAPPPPPPAAGDAAVLTAAAEAAPGADPAQVAATPPLAPLAPTDTTALVAPGEDPAGLAGDIPPPEPVPGSGPPLG
>Mature_238_residues
MRKILTAALCGALAAPAGAAAALGQVLPGAPPAPQTPAPPAPDILIIPETPAPPPAEPLPAMPAGPALGDPAPPPPPAED
GDEDGEKEKKKKLVTKEKAGGAVGGLLGGLAGAAGGPLGKIAGSFVGKQIGKAVMDGDDDDEKDDKGKDREDKDVDAPVL
QVEAPPPPPPAAGDAAVLTAAAEAAPGADPAQVAATPPLAPLAPTDTTALVAPGEDPAGLAGDIPPPEPVPGSGPPLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22778; Mature: 22778

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKILTAALCGALAAPAGAAAALGQVLPGAPPAPQTPAPPAPDILIIPETPAPPPAEPLP
CHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
AMPAGPALGDPAPPPPPAEDGDEDGEKEKKKKLVTKEKAGGAVGGLLGGLAGAAGGPLGK
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH
IAGSFVGKQIGKAVMDGDDDDEKDDKGKDREDKDVDAPVLQVEAPPPPPPAAGDAAVLTA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHH
AAEAAPGADPAQVAATPPLAPLAPTDTTALVAPGEDPAGLAGDIPPPEPVPGSGPPLG
HHHHCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKILTAALCGALAAPAGAAAALGQVLPGAPPAPQTPAPPAPDILIIPETPAPPPAEPLP
CHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
AMPAGPALGDPAPPPPPAEDGDEDGEKEKKKKLVTKEKAGGAVGGLLGGLAGAAGGPLGK
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH
IAGSFVGKQIGKAVMDGDDDDEKDDKGKDREDKDVDAPVLQVEAPPPPPPAAGDAAVLTA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHH
AAEAAPGADPAQVAATPPLAPLAPTDTTALVAPGEDPAGLAGDIPPPEPVPGSGPPLG
HHHHCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA