Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197104375

Identifier: 197104375

GI number: 197104375

Start: 1001852

End: 1003246

Strand: Reverse

Name: 197104375

Synonym: PHZ_c0909

Alternate gene names: NA

Gene position: 1003246-1001852 (Counterclockwise)

Preceding gene: 197104379

Following gene: 197104372

Centisome position: 25.1

GC content: 72.76

Gene sequence:

>1395_bases
ATGTCCGTTTCCCGCCGCCGTTTCCTCGGCTTCGCCGCCACCTCCGTCGCCTTCGCGGGTCTGTCGCACGCCTTCGCCCA
GGGAACGCCAGAGGCCTCCCGCGGCGAGGCCATCGGCTACGGCGACCTCGTCCCGGACCCGGCCGGCGTCTTCGACCTGC
CCCCGGGCTTCTCCTACAAGGTGGTCTCCGAGTTCGGCCAGCCGATGGACGACGGACTGCTCACCCCCGGCCGCATGGAC
GGCATGGGCGCCTTCCCGGCCGGCGAGGGCCGGGTCGCCCTGGTCCGCAACCACGAAGTCTATCCCGCCGACCTGGAGCG
CTCGGCGTTCGGCCGCGACGGAGCGCTGGCGGGCCGCATCGATCCGGCCCGCGTCTTCGACCGCATCGGCGATCGGCCGT
TCGCCGGCGGGACCACGACCCTCGTCTGGGACGTGCGCGAGGGCCGCCTCGTCTCGCACCACCTCAGCCTCGCCGGGACC
ATGCTGAACTGCGCGGGCGGGGTCACGCCCGAGGGCTCCTGGCTCACCTGCGAAGAGACGGTCCAAAAAGCGGGCAGCCA
GGGCGCGAAGGACCACGGCTGGGTGTTCGAGGTGCCGTCCGCCGCCCGCGTGCTCGTGGACCCGCAGCCGATCAAGGCGA
TGGGCCGGTTCCGCCACGAGGCGACCGCCACCGATCCCCGCACCGGCGTCGTCTATCTCACCGAGGATATCGGCGACGGC
CTGATCTACCGCTACCTGCCCAACGACCGCGCGCGCCTGCTGGCCGGCGGGCGGCTGCAGGCCCTGGGCTTCAAGGGCGG
CGGCGATCCCCGCAACTGGGACGAGGCCTGGTGGGCGCAGGGCGACTGGCGCGAGGTCGTCTGGGTCGATGTCGACGAGG
TCGAGAACCCGAACGACGACCTGCGCAAGCGCGGGCAGGAGAAGGGCGCGGCCCCATTCGCCCGAGGCGAGGGCCTGTTC
TTCGGCGACGGCGAGCTGTTCGTCGCCTGCACCAGCGCGGGCCGCGAGAAGCTGGGCCACATCCTGCGCTACGTCCCGAG
CCCGGCCGAGGGCCAGCCCGGCGAGGCCGACCGGCCGGGCCGCCTGCAGCTCTTCGTCGAGCCGCAGGACGCCTCGGTGA
TGAGCATGGCCGACAACCTGGCCGTCGCGCCCTGGGGCCACCTGTTCGTCTGCGAGGACAAGGGGCTGGGCCGCAACCAG
CTCAGGGCCGTCACGCCCGAGGGCCGGGTCTACACCTTCGGCCGCAACGCCAGGCCGCCGCGCCTGCCGCAGCCGGTGAA
CACCGAACTGGCCGGGGTGTGCTTCTCGCCGGACGGCTCGACGCTGTTCGTGAACCTCTATTCGCCGGGGACGACCCTGG
CGATCACCGGCCCCTGGAAGGACCTCAGGGCCTAG

Upstream 100 bases:

>100_bases
GCCCGGTCCACCCGCTAAGGCAGGCGGGCGGCCGCGACTCCGTCATCAGGCTGCAATCCTGGGCGGATAGCCCGGCGACG
TCAGGGGGTGCAATCCGATC

Downstream 100 bases:

>100_bases
GTCGCGGGCCTCCGCCCCTGCAAGGTCAGGGCCTCGGCGCCCGTTCGAACCGGCGCATCGACCAGTACTTGTAGCCCTCG
CTCTCCACGAGCCGCCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: WD40 Domain-Containing Protein Beta Propeller; Twin-Arginine Translocation Pathway Signal; Twin-Arginine Translocation Pathway Signal Protein; Phosphatase; Tat Pathway Signal Sequence Domain Protein; WD40 Domain-Containing Protein; LB Protein; WD40 Domain Protein Beta Propeller; DTDP-Glucose 4 6-Dehydratase; Signal Peptide

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MSVSRRRFLGFAATSVAFAGLSHAFAQGTPEASRGEAIGYGDLVPDPAGVFDLPPGFSYKVVSEFGQPMDDGLLTPGRMD
GMGAFPAGEGRVALVRNHEVYPADLERSAFGRDGALAGRIDPARVFDRIGDRPFAGGTTTLVWDVREGRLVSHHLSLAGT
MLNCAGGVTPEGSWLTCEETVQKAGSQGAKDHGWVFEVPSAARVLVDPQPIKAMGRFRHEATATDPRTGVVYLTEDIGDG
LIYRYLPNDRARLLAGGRLQALGFKGGGDPRNWDEAWWAQGDWREVVWVDVDEVENPNDDLRKRGQEKGAAPFARGEGLF
FGDGELFVACTSAGREKLGHILRYVPSPAEGQPGEADRPGRLQLFVEPQDASVMSMADNLAVAPWGHLFVCEDKGLGRNQ
LRAVTPEGRVYTFGRNARPPRLPQPVNTELAGVCFSPDGSTLFVNLYSPGTTLAITGPWKDLRA

Sequences:

>Translated_464_residues
MSVSRRRFLGFAATSVAFAGLSHAFAQGTPEASRGEAIGYGDLVPDPAGVFDLPPGFSYKVVSEFGQPMDDGLLTPGRMD
GMGAFPAGEGRVALVRNHEVYPADLERSAFGRDGALAGRIDPARVFDRIGDRPFAGGTTTLVWDVREGRLVSHHLSLAGT
MLNCAGGVTPEGSWLTCEETVQKAGSQGAKDHGWVFEVPSAARVLVDPQPIKAMGRFRHEATATDPRTGVVYLTEDIGDG
LIYRYLPNDRARLLAGGRLQALGFKGGGDPRNWDEAWWAQGDWREVVWVDVDEVENPNDDLRKRGQEKGAAPFARGEGLF
FGDGELFVACTSAGREKLGHILRYVPSPAEGQPGEADRPGRLQLFVEPQDASVMSMADNLAVAPWGHLFVCEDKGLGRNQ
LRAVTPEGRVYTFGRNARPPRLPQPVNTELAGVCFSPDGSTLFVNLYSPGTTLAITGPWKDLRA
>Mature_463_residues
SVSRRRFLGFAATSVAFAGLSHAFAQGTPEASRGEAIGYGDLVPDPAGVFDLPPGFSYKVVSEFGQPMDDGLLTPGRMDG
MGAFPAGEGRVALVRNHEVYPADLERSAFGRDGALAGRIDPARVFDRIGDRPFAGGTTTLVWDVREGRLVSHHLSLAGTM
LNCAGGVTPEGSWLTCEETVQKAGSQGAKDHGWVFEVPSAARVLVDPQPIKAMGRFRHEATATDPRTGVVYLTEDIGDGL
IYRYLPNDRARLLAGGRLQALGFKGGGDPRNWDEAWWAQGDWREVVWVDVDEVENPNDDLRKRGQEKGAAPFARGEGLFF
GDGELFVACTSAGREKLGHILRYVPSPAEGQPGEADRPGRLQLFVEPQDASVMSMADNLAVAPWGHLFVCEDKGLGRNQL
RAVTPEGRVYTFGRNARPPRLPQPVNTELAGVCFSPDGSTLFVNLYSPGTTLAITGPWKDLRA

Specific function: Unknown

COG id: COG3211

COG function: function code R; Predicted phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50062; Mature: 49931

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSRRRFLGFAATSVAFAGLSHAFAQGTPEASRGEAIGYGDLVPDPAGVFDLPPGFSYK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEECCCCCCHH
VVSEFGQPMDDGLLTPGRMDGMGAFPAGEGRVALVRNHEVYPADLERSAFGRDGALAGRI
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCEECCC
DPARVFDRIGDRPFAGGTTTLVWDVREGRLVSHHLSLAGTMLNCAGGVTPEGSWLTCEET
CHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHCCCCCCCCCEEEHHHH
VQKAGSQGAKDHGWVFEVPSAARVLVDPQPIKAMGRFRHEATATDPRTGVVYLTEDIGDG
HHHHCCCCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
LIYRYLPNDRARLLAGGRLQALGFKGGGDPRNWDEAWWAQGDWREVVWVDVDEVENPNDD
EEEEECCCCCEEEEECCEEEEEEECCCCCCCCCCHHHCCCCCCEEEEEEEHHHCCCCCHH
LRKRGQEKGAAPFARGEGLFFGDGELFVACTSAGREKLGHILRYVPSPAEGQPGEADRPG
HHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
RLQLFVEPQDASVMSMADNLAVAPWGHLFVCEDKGLGRNQLRAVTPEGRVYTFGRNARPP
EEEEEECCCCCHHHHHHCCEEECCCCEEEEECCCCCCCCCEEEECCCCCEEECCCCCCCC
RLPQPVNTELAGVCFSPDGSTLFVNLYSPGTTLAITGPWKDLRA
CCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCHHHHCC
>Mature Secondary Structure 
SVSRRRFLGFAATSVAFAGLSHAFAQGTPEASRGEAIGYGDLVPDPAGVFDLPPGFSYK
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEECCCCCCHH
VVSEFGQPMDDGLLTPGRMDGMGAFPAGEGRVALVRNHEVYPADLERSAFGRDGALAGRI
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCEECCC
DPARVFDRIGDRPFAGGTTTLVWDVREGRLVSHHLSLAGTMLNCAGGVTPEGSWLTCEET
CHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHCCCCCCCCCEEEHHHH
VQKAGSQGAKDHGWVFEVPSAARVLVDPQPIKAMGRFRHEATATDPRTGVVYLTEDIGDG
HHHHCCCCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
LIYRYLPNDRARLLAGGRLQALGFKGGGDPRNWDEAWWAQGDWREVVWVDVDEVENPNDD
EEEEECCCCCEEEEECCEEEEEEECCCCCCCCCCHHHCCCCCCEEEEEEEHHHCCCCCHH
LRKRGQEKGAAPFARGEGLFFGDGELFVACTSAGREKLGHILRYVPSPAEGQPGEADRPG
HHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
RLQLFVEPQDASVMSMADNLAVAPWGHLFVCEDKGLGRNQLRAVTPEGRVYTFGRNARPP
EEEEEECCCCCHHHHHHCCEEECCCCEEEEECCCCCCCCCEEEECCCCCEEECCCCCCCC
RLPQPVNTELAGVCFSPDGSTLFVNLYSPGTTLAITGPWKDLRA
CCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA