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The map label for this gene is flgH [H]

Identifier: 197104379

GI number: 197104379

Start: 1006989

End: 1007753

Strand: Reverse

Name: flgH [H]

Synonym: PHZ_c0913

Alternate gene names: 197104379

Gene position: 1007753-1006989 (Counterclockwise)

Preceding gene: 197104380

Following gene: 197104375

Centisome position: 25.22

GC content: 70.85

Gene sequence:

>765_bases
TTGAAGGAAGCCCCCATGCGTATCCGTCTGACCGCCATCGCCGCCCCCCTGCTGCTGGGCGCCTCCCTCGCCGCCTGCTC
GACCGTGACCGAGGCCGTGCGCGGCCCCGAGCTGGCCCCGGTGGGCTATCCGGCCGCCCTGGTGCCGCGGGAACAGAACG
TGCTGCCGCTGGCCTCGGCCCGCGAGCCCCTGCCCCATCCGGCCAGCGCCAACTCGCTGTGGCGCGCGGGGGCCCGGGCG
TTCTTCGTCGACCAGCGCGCCGGCCGCGTCGGCGACATCCTGACCGTCCAGATCGACATCGACGACAGCGCCAAGACCAT
CAACTCGACGACCAGCTCGCGTTCGTCGGGGACCACCATGGGCTTCCCGCACCTGCTGGGCCTGGAATCCAGCCTGGGCC
GCATCCTGCCCGGCGAGTTCGACCCAGCGAACGCCGTCGACGTCGGCTCGAAGACTTCCAACACCGGCGCGGGCGCGGTG
AACCGGGCCGAGAAGATCAGCCTGACCATCGCGGCGGTGGTCACCGGCGTGCTGCCGAACGGCAACATGACCATCCAGGG
CACCCAGGAGGTACGCACCAACACCGACATCCGCCAGCTGACCGTGGCGGGCATCGTGCGGCCCGAGGACATCTCGGCGT
CCAACACCATCCGCCACACCCAGATCGCCGAGGCCCGCATCAGCTACGGCGGCCGCGGCGACATCAGCCGCGTGCAGAAG
ACGCCGGCGGGCCAGTCGCTGATCGAGCGCTTCTCGCCTTTCTAA

Upstream 100 bases:

>100_bases
AGAAGATCGTCCAGGCGGTGGTGACCGGTCCCGGCCAGGCGGCCGTGGGCCCCGCCGCCGGCCACATGAAGCTGAACCGC
ACCACCCGCGTCGCGCTCCG

Downstream 100 bases:

>100_bases
AAGCTAATCGGGATCAATGCGGCGGCGCTGGCGTTAACCTCTCAGAGGGAGCGTCATGCGTCGCCGTAGTCTTTTCAGCC
TGCTCACCGCCCTGGTCCTG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKEAPMRIRLTAIAAPLLLGASLAACSTVTEAVRGPELAPVGYPAALVPREQNVLPLASAREPLPHPASANSLWRAGARA
FFVDQRAGRVGDILTVQIDIDDSAKTINSTTSSRSSGTTMGFPHLLGLESSLGRILPGEFDPANAVDVGSKTSNTGAGAV
NRAEKISLTIAAVVTGVLPNGNMTIQGTQEVRTNTDIRQLTVAGIVRPEDISASNTIRHTQIAEARISYGGRGDISRVQK
TPAGQSLIERFSPF

Sequences:

>Translated_254_residues
MKEAPMRIRLTAIAAPLLLGASLAACSTVTEAVRGPELAPVGYPAALVPREQNVLPLASAREPLPHPASANSLWRAGARA
FFVDQRAGRVGDILTVQIDIDDSAKTINSTTSSRSSGTTMGFPHLLGLESSLGRILPGEFDPANAVDVGSKTSNTGAGAV
NRAEKISLTIAAVVTGVLPNGNMTIQGTQEVRTNTDIRQLTVAGIVRPEDISASNTIRHTQIAEARISYGGRGDISRVQK
TPAGQSLIERFSPF
>Mature_254_residues
MKEAPMRIRLTAIAAPLLLGASLAACSTVTEAVRGPELAPVGYPAALVPREQNVLPLASAREPLPHPASANSLWRAGARA
FFVDQRAGRVGDILTVQIDIDDSAKTINSTTSSRSSGTTMGFPHLLGLESSLGRILPGEFDPANAVDVGSKTSNTGAGAV
NRAEKISLTIAAVVTGVLPNGNMTIQGTQEVRTNTDIRQLTVAGIVRPEDISASNTIRHTQIAEARISYGGRGDISRVQK
TPAGQSLIERFSPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=199, Percent_Identity=32.6633165829146, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 26630; Mature: 26630

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEAPMRIRLTAIAAPLLLGASLAACSTVTEAVRGPELAPVGYPAALVPREQNVLPLASA
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCHHC
REPLPHPASANSLWRAGARAFFVDQRAGRVGDILTVQIDIDDSAKTINSTTSSRSSGTTM
CCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCC
GFPHLLGLESSLGRILPGEFDPANAVDVGSKTSNTGAGAVNRAEKISLTIAAVVTGVLPN
CCHHHHCCHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHEEEEHHHHHCCCC
GNMTIQGTQEVRTNTDIRQLTVAGIVRPEDISASNTIRHTQIAEARISYGGRGDISRVQK
CCEEEEECHHHHCCCCHHHHHHHHEECCCCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHC
TPAGQSLIERFSPF
CCCHHHHHHHHCCC
>Mature Secondary Structure
MKEAPMRIRLTAIAAPLLLGASLAACSTVTEAVRGPELAPVGYPAALVPREQNVLPLASA
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCHHC
REPLPHPASANSLWRAGARAFFVDQRAGRVGDILTVQIDIDDSAKTINSTTSSRSSGTTM
CCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCC
GFPHLLGLESSLGRILPGEFDPANAVDVGSKTSNTGAGAVNRAEKISLTIAAVVTGVLPN
CCHHHHCCHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHEEEEHHHHHCCCC
GNMTIQGTQEVRTNTDIRQLTVAGIVRPEDISASNTIRHTQIAEARISYGGRGDISRVQK
CCEEEEECHHHHCCCCHHHHHHHHEECCCCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHC
TPAGQSLIERFSPF
CCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2211524; 11259647 [H]