| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is hflK [H]
Identifier: 197104344
GI number: 197104344
Start: 971009
End: 972154
Strand: Reverse
Name: hflK [H]
Synonym: PHZ_c0878
Alternate gene names: 197104344
Gene position: 972154-971009 (Counterclockwise)
Preceding gene: 197104346
Following gene: 197104343
Centisome position: 24.33
GC content: 72.51
Gene sequence:
>1146_bases ATGCCCTGGAACGATAACGCCAATCCCGGCCCGTGGGGCTCGCCCCCGTCCGGCGACGGCGACCGCCGAGACAACACCCC CAAGCGCCCGCGCGGCGGCGGACCCCGCCGTCCCGAAGGCCCCGACTTCAACGCCAACTTCGACCGGCTGGGCCGGCGGC TGCGCGACTTCTTCAGCGGCGGCCCCGGCGGCGGGGTCCGGCCCGGCGCGATCGCCGCGGTCGTGGGCGCGGCCTTCGGC CTGTGGGCGCTGTCGGGGATCTACGTGGTCCAGCCGAACGAGGAGGCCGTGGTCACCACCTTCGGCGCCTATTCGCGCAA CGAGGGCCCCGGCCTGCGCTACCACCTGCCCGCTCCTATCGAGCGCGTGCAGAAGGTGCCGGTCACCAGCCTGCAGCGGC TGGACGTGGGCGGCGCCGCCGCCGGCGCGGTGCCGGAAGAGAGCCTGATGCTCACCGGCGACGAGAACATCATCGACCTG CAATTCAGCGTCACCTGGCGCGTCGCCGACGCCGACCGCTTCGTCTTCACCATCCGCGACCCCGAAGGCTCGGTGAAGGC GGTGGCGGAGAGCGCCATGCGCGAGGTCGTCGGCCGCACCAACCTGCTGGACATCCTCACCACCGGCCGCGGCCAGGTGC AGCAGCAGGCGGCCGAACTGATGCAGCGGACCCTGGATTCCTGGGGCGCCGGCGTGCGCATCGACGAGGTGCAGATCCGC TCGGCCAACCCGCCGCAGCAGGTGCTGGCGGCGTTCCGCGACGTGGTCAGCGCCCAGCAGGACCAGGAGTCGGCGGTCAA CGAGGCCAACACCTACCGCAACCGGGTGATCAACGAGGCCAAGGGCGACGCCGCGCGCATCGTGCAGGCCGCCCAGGCCT ACCGCGAGCAGGCCGTGCGCGAGGCCACCGGCGATGCGTCCCGCTTCAACGCCATCCTGAACGAATACCGCCGCGCTCCG GGCGCCACCCGGGACCGGATCTACATCGAGACCATGCAGCGCGTGCTCGCCCGTTCGAACAAGGTGATCGTCGACAGCGA AGGCGCCTCCGCGCCGATCATCCTGCCGCCCGACGTGTTCCGGCCCAGGACCCAGCCGCAGGCGCCCGCGCCGCAGGCCG TCCCGCAGACGGAGGCCGCCCAATGA
Upstream 100 bases:
>100_bases AGGGGCCTCATATCCGGCTGGAAGCGCCGGTTTACAAGCCCATGCAGGGCTTTAAGCAGAGGACCGCTAGGCCCCACTTG AGTACGACGCGACCTGGCTG
Downstream 100 bases:
>100_bases GCCGCCGTCTCTGGACCTACCTGATCGTCGGGATCGGCGCCCTCGTGGTGCTGGCCAACACCCTCTACATCGTCGACCAG CGCGAGCAGGCGATCGTGCT
Product: protease subunit hflK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPWNDNANPGPWGSPPSGDGDRRDNTPKRPRGGGPRRPEGPDFNANFDRLGRRLRDFFSGGPGGGVRPGAIAAVVGAAFG LWALSGIYVVQPNEEAVVTTFGAYSRNEGPGLRYHLPAPIERVQKVPVTSLQRLDVGGAAAGAVPEESLMLTGDENIIDL QFSVTWRVADADRFVFTIRDPEGSVKAVAESAMREVVGRTNLLDILTTGRGQVQQQAAELMQRTLDSWGAGVRIDEVQIR SANPPQQVLAAFRDVVSAQQDQESAVNEANTYRNRVINEAKGDAARIVQAAQAYREQAVREATGDASRFNAILNEYRRAP GATRDRIYIETMQRVLARSNKVIVDSEGASAPIILPPDVFRPRTQPQAPAPQAVPQTEAAQ
Sequences:
>Translated_381_residues MPWNDNANPGPWGSPPSGDGDRRDNTPKRPRGGGPRRPEGPDFNANFDRLGRRLRDFFSGGPGGGVRPGAIAAVVGAAFG LWALSGIYVVQPNEEAVVTTFGAYSRNEGPGLRYHLPAPIERVQKVPVTSLQRLDVGGAAAGAVPEESLMLTGDENIIDL QFSVTWRVADADRFVFTIRDPEGSVKAVAESAMREVVGRTNLLDILTTGRGQVQQQAAELMQRTLDSWGAGVRIDEVQIR SANPPQQVLAAFRDVVSAQQDQESAVNEANTYRNRVINEAKGDAARIVQAAQAYREQAVREATGDASRFNAILNEYRRAP GATRDRIYIETMQRVLARSNKVIVDSEGASAPIILPPDVFRPRTQPQAPAPQAVPQTEAAQ >Mature_380_residues PWNDNANPGPWGSPPSGDGDRRDNTPKRPRGGGPRRPEGPDFNANFDRLGRRLRDFFSGGPGGGVRPGAIAAVVGAAFGL WALSGIYVVQPNEEAVVTTFGAYSRNEGPGLRYHLPAPIERVQKVPVTSLQRLDVGGAAAGAVPEESLMLTGDENIIDLQ FSVTWRVADADRFVFTIRDPEGSVKAVAESAMREVVGRTNLLDILTTGRGQVQQQAAELMQRTLDSWGAGVRIDEVQIRS ANPPQQVLAAFRDVVSAQQDQESAVNEANTYRNRVINEAKGDAARIVQAAQAYREQAVREATGDASRFNAILNEYRRAPG ATRDRIYIETMQRVLARSNKVIVDSEGASAPIILPPDVFRPRTQPQAPAPQAVPQTEAAQ
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=274, Percent_Identity=35.036496350365, Blast_Score=183, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 41237; Mature: 41105
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWNDNANPGPWGSPPSGDGDRRDNTPKRPRGGGPRRPEGPDFNANFDRLGRRLRDFFSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC GPGGGVRPGAIAAVVGAAFGLWALSGIYVVQPNEEAVVTTFGAYSRNEGPGLRYHLPAPI CCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCEEEECCCHH ERVQKVPVTSLQRLDVGGAAAGAVPEESLMLTGDENIIDLQFSVTWRVADADRFVFTIRD HHHHHCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEEEECCCEEEEEEEC PEGSVKAVAESAMREVVGRTNLLDILTTGRGQVQQQAAELMQRTLDSWGAGVRIDEVQIR CCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC SANPPQQVLAAFRDVVSAQQDQESAVNEANTYRNRVINEAKGDAARIVQAAQAYREQAVR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EATGDASRFNAILNEYRRAPGATRDRIYIETMQRVLARSNKVIVDSEGASAPIILPPDVF HHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCC RPRTQPQAPAPQAVPQTEAAQ CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PWNDNANPGPWGSPPSGDGDRRDNTPKRPRGGGPRRPEGPDFNANFDRLGRRLRDFFSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC GPGGGVRPGAIAAVVGAAFGLWALSGIYVVQPNEEAVVTTFGAYSRNEGPGLRYHLPAPI CCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCEEEECCCHH ERVQKVPVTSLQRLDVGGAAAGAVPEESLMLTGDENIIDLQFSVTWRVADADRFVFTIRD HHHHHCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEEEECCCEEEEEEEC PEGSVKAVAESAMREVVGRTNLLDILTTGRGQVQQQAAELMQRTLDSWGAGVRIDEVQIR CCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC SANPPQQVLAAFRDVVSAQQDQESAVNEANTYRNRVINEAKGDAARIVQAAQAYREQAVR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EATGDASRFNAILNEYRRAPGATRDRIYIETMQRVLARSNKVIVDSEGASAPIILPPDVF HHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCC RPRTQPQAPAPQAVPQTEAAQ CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]