| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is zur [H]
Identifier: 197104288
GI number: 197104288
Start: 906963
End: 907445
Strand: Reverse
Name: zur [H]
Synonym: PHZ_c0822
Alternate gene names: 197104288
Gene position: 907445-906963 (Counterclockwise)
Preceding gene: 197104290
Following gene: 197104286
Centisome position: 22.71
GC content: 75.16
Gene sequence:
>483_bases ATGTCGCAGCACTGCCATCATCACGACGAGGACGCCCCGGCGGGCCTGAAGGGCTCGGCCCTGCGCCAGGCGCTGGGCGA GGCCGAGGCGCGCTGCGCCGAGACCCACGAGCGTCTGACGCCGCCGCGGCGGCGGGTGCTGGAGCTGCTGCTGGCTTCGG AGGGGCCGCTGAAGGCCTACGACCTGATCGCCGCCTTCGGGGCCGACGGCGAGCCGGCCAAGCCGCCGACCGTCTACCGG GCGCTGGAGTTCCTGGAGCGGCTGGGCTTCGCCCACCGGATCGAGAGCCTGAACGCCTACGTCCCCTGCCGGATCGAGGG CGGCCATGCGGCGGCCTTCCTGATCTGCGACTGCTGCGGGGCGGCGCAGGAGTTCGAGCCCGACTTCGGCCCGCAGCTCG CCGCGGCGGCCGCGGCGGGCTACGCGGTCCGCTCGGTGACGCTGGAGGCCCGCGGCCTATGCGCCGCGTGCCGGGAGCAC TGA
Upstream 100 bases:
>100_bases GGTCCTGGGCACTTGCGACGAGGCGTCACTGTTATGAAATAACATAACGAGCCGTCAAGCCATTGGCGCCGCGGACGGAA CCGGGTTAGCTGGAAGGGCG
Downstream 100 bases:
>100_bases GCCCGCCGGGCGTTCCCCCTCGCCGATGCGCAAGCAGATCTACCTCGACTGCGACGGCGTGCTCGCCGACTTCGACAAGG GCGCCGAGCAGGTGCTGGGC
Product: Fe2+/Zn2+ uptake regulation protein
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSQHCHHHDEDAPAGLKGSALRQALGEAEARCAETHERLTPPRRRVLELLLASEGPLKAYDLIAAFGADGEPAKPPTVYR ALEFLERLGFAHRIESLNAYVPCRIEGGHAAAFLICDCCGAAQEFEPDFGPQLAAAAAAGYAVRSVTLEARGLCAACREH
Sequences:
>Translated_160_residues MSQHCHHHDEDAPAGLKGSALRQALGEAEARCAETHERLTPPRRRVLELLLASEGPLKAYDLIAAFGADGEPAKPPTVYR ALEFLERLGFAHRIESLNAYVPCRIEGGHAAAFLICDCCGAAQEFEPDFGPQLAAAAAAGYAVRSVTLEARGLCAACREH >Mature_159_residues SQHCHHHDEDAPAGLKGSALRQALGEAEARCAETHERLTPPRRRVLELLLASEGPLKAYDLIAAFGADGEPAKPPTVYRA LEFLERLGFAHRIESLNAYVPCRIEGGHAAAFLICDCCGAAQEFEPDFGPQLAAAAAAGYAVRSVTLEARGLCAACREH
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=148, Percent_Identity=42.5675675675676, Blast_Score=112, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17147; Mature: 17015
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHCHHHDEDAPAGLKGSALRQALGEAEARCAETHERLTPPRRRVLELLLASEGPLKAY CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH DLIAAFGADGEPAKPPTVYRALEFLERLGFAHRIESLNAYVPCRIEGGHAAAFLICDCCG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHC AAQEFEPDFGPQLAAAAAAGYAVRSVTLEARGLCAACREH CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQHCHHHDEDAPAGLKGSALRQALGEAEARCAETHERLTPPRRRVLELLLASEGPLKAY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH DLIAAFGADGEPAKPPTVYRALEFLERLGFAHRIESLNAYVPCRIEGGHAAAFLICDCCG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHC AAQEFEPDFGPQLAAAAAAGYAVRSVTLEARGLCAACREH CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]