| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104286
Identifier: 197104286
GI number: 197104286
Start: 904771
End: 905313
Strand: Reverse
Name: 197104286
Synonym: PHZ_c0820
Alternate gene names: NA
Gene position: 905313-904771 (Counterclockwise)
Preceding gene: 197104288
Following gene: 197104285
Centisome position: 22.65
GC content: 72.01
Gene sequence:
>543_bases ATGGCCGCCACGCCCAACGACGTCCTCGGATTCTGGCGTCACGCCGGGCCGACGAAGTGGTTCCGCGGCGGCCCCGCGTT CGACGAGGCCTGCCGGCTGAGGTTCGAGCCCACGCACCACGCCGCGGCCCGCGGGGCCTACGACGCGTGGGCGCAGACGC CCGAGGGCGCCCTGGCGCTGGTCATCCTGCTGGATCAGATTCCGCGGAACCTGTACCGCGGCTCGGGCCACGCCTTCGCC ACCGACGGCAAGGCGCGGCAGGTCGCCCGCGCGGTCGTGGAGAAGGGCTGGCAGGAGGAGGTCGATCCCGCGCTGGCCCA GTTCTTCCTCCTGCCGTTCGAGCATTCGGAGGACCCGGCCGACCAGGACCTGGCGGTGAAGCTGGCCCGCGAACTGGGAG ATCCGGAGACCCTGAAGTGGGCCGAGATCCACCGCGACATCATCACGAGGTTCGGGCGCTTCCCGCACCGCAACCCGGCG CTGGGCCGGGTCACGACCGACGAGGAACAGGCGTTCCTCGACGACGGGGGCTTCGCCGGCTAG
Upstream 100 bases:
>100_bases CCTCGCCGCGAGCAAGCACGCCCCAGCCTGAACCGTGCTTGAACGGGACGCACGGGCGCCCAACTGTGCCGGTTCAGGTC AGGACCAGGAGGAGCCCCGC
Downstream 100 bases:
>100_bases CGGCTCGGCTCAGCCGCCTAGGCGGCCGGCTTCTCGGCCGCGGCGGCCTCGGCGGCGGGCGCGGGCTGGGCCTTCGGCGT CTCGGTCGTGCAGACCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MAATPNDVLGFWRHAGPTKWFRGGPAFDEACRLRFEPTHHAAARGAYDAWAQTPEGALALVILLDQIPRNLYRGSGHAFA TDGKARQVARAVVEKGWQEEVDPALAQFFLLPFEHSEDPADQDLAVKLARELGDPETLKWAEIHRDIITRFGRFPHRNPA LGRVTTDEEQAFLDDGGFAG
Sequences:
>Translated_180_residues MAATPNDVLGFWRHAGPTKWFRGGPAFDEACRLRFEPTHHAAARGAYDAWAQTPEGALALVILLDQIPRNLYRGSGHAFA TDGKARQVARAVVEKGWQEEVDPALAQFFLLPFEHSEDPADQDLAVKLARELGDPETLKWAEIHRDIITRFGRFPHRNPA LGRVTTDEEQAFLDDGGFAG >Mature_179_residues AATPNDVLGFWRHAGPTKWFRGGPAFDEACRLRFEPTHHAAARGAYDAWAQTPEGALALVILLDQIPRNLYRGSGHAFAT DGKARQVARAVVEKGWQEEVDPALAQFFLLPFEHSEDPADQDLAVKLARELGDPETLKWAEIHRDIITRFGRFPHRNPAL GRVTTDEEQAFLDDGGFAG
Specific function: Unknown
COG id: COG3803
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20000; Mature: 19868
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATPNDVLGFWRHAGPTKWFRGGPAFDEACRLRFEPTHHAAARGAYDAWAQTPEGALAL CCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHCHHHHHHCCCCCHHHH VILLDQIPRNLYRGSGHAFATDGKARQVARAVVEKGWQEEVDPALAQFFLLPFEHSEDPA HHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC DQDLAVKLARELGDPETLKWAEIHRDIITRFGRFPHRNPALGRVTTDEEQAFLDDGGFAG CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure AATPNDVLGFWRHAGPTKWFRGGPAFDEACRLRFEPTHHAAARGAYDAWAQTPEGALAL CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHCHHHHHHCCCCCHHHH VILLDQIPRNLYRGSGHAFATDGKARQVARAVVEKGWQEEVDPALAQFFLLPFEHSEDPA HHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC DQDLAVKLARELGDPETLKWAEIHRDIITRFGRFPHRNPALGRVTTDEEQAFLDDGGFAG CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA