Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is gnl [H]

Identifier: 197104281

GI number: 197104281

Start: 898677

End: 899588

Strand: Reverse

Name: gnl [H]

Synonym: PHZ_c0815

Alternate gene names: 197104281

Gene position: 899588-898677 (Counterclockwise)

Preceding gene: 197104283

Following gene: 197104279

Centisome position: 22.51

GC content: 69.85

Gene sequence:

>912_bases
GTGGAGATCGAACTGATCGCCGAAGGGCTTGAGTTTCCGGAGGGGCCGATCGCCATGGCCGACGGCTCGGTGATCCTCAC
CGAGATCAAGGGCCGGCGGCTGACGCGGATCACGCCCGACGGGCGCAAGGAGACCGTGGTCGAGACCGGCGGCGGGCCCA
ACGGGTCGGCCATCGGGCCCGACGGGGCGATCTGGATCACCAACAACGGCGGCTCGTTCGTCTGGATCGAGCGCGACGGC
CTGACCATCCCCGGCCCCACGCCGCCCGAGCACACCGGCGGCATGATCCAGCGCTTCGACCTGAAGAGCGGCGAGCTCAC
GACCGTCTACGACAGCTGCGAGGGCAAGCGGCTGGTGGGGCCGAACGACCTCGTCTTCGACAAGCAGGGCGGCTTCTGGT
TCTCGGACCACGGCTGCTCGACGCCCGAGGGGCGCAAGTTCGGCGGGGTCTACTACGCCCGGACCGACGGCTCGCACATC
TCGCGCCAGCGCGACCACCTGACCTCCCCGAACGGCATCGGTCTCTCGCCCGACGAGAAGACCGTCTACCTGGCCGACAC
CACCCTGGGCCGGCTGTGGGCCTTCGACGTGGCCGAGCCCGGCGTGCTGGAGCCCGGCCCCGGCTTCGCGCCCGGCAAGG
TGGTCTGCAACCTGCCCGGCTACCAGCTGCTGGACAGTCTGGCGGTGGAGGCCGGCGGCAAGGTCTGCGTGGCCACCATC
ATCAACGGCGGGATCACCGCCTTCGACCCCGACGGAACCACCGAGCACTACCCCTTCCCGGACCTCCTGGTGACCAACAT
CTGCTTCGGCGGCCCCGACATGAGGACCGCCTGGATCACCGCCTCGGGGACCGGCAAGCTCTACCGGGCCAAGTGGCCGC
GGCCGGGCCTGAAGCTGAACTTCAACGGCTGA

Upstream 100 bases:

>100_bases
CCGGCCCCGGAAATACTTGACGTCACGGAAGGCGCCGACGGGGCTTCACTCGCCGGGCGCCGGGCGGGCATAGTCGCGCA
AAAGCAGAGGGAGGAACGCG

Downstream 100 bases:

>100_bases
GCGGCGTCAGACGTCGCCGACGGCGGCCCGGCGGCGCGCCAGCGCCTCCGGCGTCCATTCCTTCCGCATGTCGTAGTAGA
CCTCGAAGGTCCTCGCCCCT

Product: gluconolactonase precursor

Products: NA

Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MEIELIAEGLEFPEGPIAMADGSVILTEIKGRRLTRITPDGRKETVVETGGGPNGSAIGPDGAIWITNNGGSFVWIERDG
LTIPGPTPPEHTGGMIQRFDLKSGELTTVYDSCEGKRLVGPNDLVFDKQGGFWFSDHGCSTPEGRKFGGVYYARTDGSHI
SRQRDHLTSPNGIGLSPDEKTVYLADTTLGRLWAFDVAEPGVLEPGPGFAPGKVVCNLPGYQLLDSLAVEAGGKVCVATI
INGGITAFDPDGTTEHYPFPDLLVTNICFGGPDMRTAWITASGTGKLYRAKWPRPGLKLNFNG

Sequences:

>Translated_303_residues
MEIELIAEGLEFPEGPIAMADGSVILTEIKGRRLTRITPDGRKETVVETGGGPNGSAIGPDGAIWITNNGGSFVWIERDG
LTIPGPTPPEHTGGMIQRFDLKSGELTTVYDSCEGKRLVGPNDLVFDKQGGFWFSDHGCSTPEGRKFGGVYYARTDGSHI
SRQRDHLTSPNGIGLSPDEKTVYLADTTLGRLWAFDVAEPGVLEPGPGFAPGKVVCNLPGYQLLDSLAVEAGGKVCVATI
INGGITAFDPDGTTEHYPFPDLLVTNICFGGPDMRTAWITASGTGKLYRAKWPRPGLKLNFNG
>Mature_303_residues
MEIELIAEGLEFPEGPIAMADGSVILTEIKGRRLTRITPDGRKETVVETGGGPNGSAIGPDGAIWITNNGGSFVWIERDG
LTIPGPTPPEHTGGMIQRFDLKSGELTTVYDSCEGKRLVGPNDLVFDKQGGFWFSDHGCSTPEGRKFGGVYYARTDGSHI
SRQRDHLTSPNGIGLSPDEKTVYLADTTLGRLWAFDVAEPGVLEPGPGFAPGKVVCNLPGYQLLDSLAVEAGGKVCVATI
INGGITAFDPDGTTEHYPFPDLLVTNICFGGPDMRTAWITASGTGKLYRAKWPRPGLKLNFNG

Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511
- InterPro:   IPR006311 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: =3.1.1.17 [H]

Molecular weight: Translated: 32337; Mature: 32337

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIELIAEGLEFPEGPIAMADGSVILTEIKGRRLTRITPDGRKETVVETGGGPNGSAIGP
CEEEEEECCCCCCCCCEEEECCCEEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCC
DGAIWITNNGGSFVWIERDGLTIPGPTPPEHTGGMIQRFDLKSGELTTVYDSCEGKRLVG
CCEEEEECCCCEEEEEECCCEECCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEC
PNDLVFDKQGGFWFSDHGCSTPEGRKFGGVYYARTDGSHISRQRDHLTSPNGIGLSPDEK
CCCEEEECCCCEEECCCCCCCCCCCEECCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC
TVYLADTTLGRLWAFDVAEPGVLEPGPGFAPGKVVCNLPGYQLLDSLAVEAGGKVCVATI
EEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEEE
INGGITAFDPDGTTEHYPFPDLLVTNICFGGPDMRTAWITASGTGKLYRAKWPRPGLKLN
ECCCEEEECCCCCCCCCCCHHHHHHHEECCCCCCEEEEEEECCCCCEEEEECCCCCEEEE
FNG
ECC
>Mature Secondary Structure
MEIELIAEGLEFPEGPIAMADGSVILTEIKGRRLTRITPDGRKETVVETGGGPNGSAIGP
CEEEEEECCCCCCCCCEEEECCCEEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCC
DGAIWITNNGGSFVWIERDGLTIPGPTPPEHTGGMIQRFDLKSGELTTVYDSCEGKRLVG
CCEEEEECCCCEEEEEECCCEECCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEC
PNDLVFDKQGGFWFSDHGCSTPEGRKFGGVYYARTDGSHISRQRDHLTSPNGIGLSPDEK
CCCEEEECCCCEEECCCCCCCCCCCEECCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC
TVYLADTTLGRLWAFDVAEPGVLEPGPGFAPGKVVCNLPGYQLLDSLAVEAGGKVCVATI
EEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEEE
INGGITAFDPDGTTEHYPFPDLLVTNICFGGPDMRTAWITASGTGKLYRAKWPRPGLKLN
ECCCEEEECCCCCCCCCCCHHHHHHHEECCCCCCEEEEEEECCCCCEEEEECCCCCEEEE
FNG
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482681 [H]