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The map label for this gene is 197104266

Identifier: 197104266

GI number: 197104266

Start: 884803

End: 885063

Strand: Reverse

Name: 197104266

Synonym: PHZ_c0800

Alternate gene names: NA

Gene position: 885063-884803 (Counterclockwise)

Preceding gene: 197104267

Following gene: 197104260

Centisome position: 22.15

GC content: 77.01

Gene sequence:

>261_bases
ATGCTTCTCGCCTGGATCGCCGGGGCCAGCCTGGCCGCCTTCGCCGCCTTCGCCGCCGACAAGCGCGCCGCGGTGCGCGG
CGAGCGGCGCACGCCCGAGACGACCCTGCTGCTGCTGGCCGCCATCGGCGGCTCGCCCGGCGCGATCGCGGCCCAGCAGA
TCCTGCGCCACAAGACCCGCAAGGAGCCGTTCCGCAGCCTCCTGTGGTCGGTGGCCGCGGCCCAGGCCGCCGCGGCGCTC
TGGATCGCCGTCGCGGGCTAG

Upstream 100 bases:

>100_bases
CGGACGAACCGGCTCCCGAGGCCGACGCCGCACCGGCCGAAGCCCAACCCGCCGAAGCGACCGAGCCGCCGACCGCCGGC
TAGGCCGGCGGCCCCGCACC

Downstream 100 bases:

>100_bases
GCGCCCTCGGGCTCGGGCGGCTTCTCCTCGTTGCGGGCGAGGATGGCGGTCACCGCCATGTCGCCGGTGACGTTGCCGAC
GGTGCGGAAGATGTCGGGCA

Product: cold-shock DNA-binding domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MLLAWIAGASLAAFAAFAADKRAAVRGERRTPETTLLLLAAIGGSPGAIAAQQILRHKTRKEPFRSLLWSVAAAQAAAAL
WIAVAG

Sequences:

>Translated_86_residues
MLLAWIAGASLAAFAAFAADKRAAVRGERRTPETTLLLLAAIGGSPGAIAAQQILRHKTRKEPFRSLLWSVAAAQAAAAL
WIAVAG
>Mature_86_residues
MLLAWIAGASLAAFAAFAADKRAAVRGERRTPETTLLLLAAIGGSPGAIAAQQILRHKTRKEPFRSLLWSVAAAQAAAAL
WIAVAG

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8923; Mature: 8923

Theoretical pI: Translated: 12.14; Mature: 12.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLAWIAGASLAAFAAFAADKRAAVRGERRTPETTLLLLAAIGGSPGAIAAQQILRHKTR
CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHC
KEPFRSLLWSVAAAQAAAALWIAVAG
CCHHHHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MLLAWIAGASLAAFAAFAADKRAAVRGERRTPETTLLLLAAIGGSPGAIAAQQILRHKTR
CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHC
KEPFRSLLWSVAAAQAAAALWIAVAG
CCHHHHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA