| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104260
Identifier: 197104260
GI number: 197104260
Start: 877012
End: 877581
Strand: Reverse
Name: 197104260
Synonym: PHZ_c0794
Alternate gene names: NA
Gene position: 877581-877012 (Counterclockwise)
Preceding gene: 197104266
Following gene: 197104255
Centisome position: 21.96
GC content: 72.81
Gene sequence:
>570_bases ATGCGCCGAACGCTGGTCCTGTCCCTGTCCCTGGCCGCCCTGTCCCCGCTCGTCCTGGCCGCCTGCCAGAAGAAGACCGA GACCGCCGAGGCGCCCGCCGCCCAGGCGCCCTCGGCCGCCCTGCCCGCCCCCGGCGCCGCCGCGCCGCCGGCCCGCAAGC CCGGCCTCTGGAGCCAGACGGTGACCACTGCCGGCATGAGCCAGACGATGAAGATCTGCTTCGACGAGGCCACCGACCGA CGGATGGCGGTCTACGGCCAGACGGTGGACCAGGACCGCTGCGAGAAGAACGTGGTGACGCCGATCGCCGGCGGCTGGCG GTTCGAGAGCGTCTGCGACATGGGCTCGGGCGGCAAGGCGACGACCTCGGGAACGGCCACGGGCGACTTCGCCAGCCGCT ACGAGGTCAAGGCGGTCACCGAGACCACCGGCGCCCAGGCTCCGCAGATGAACGGCCGCCACGAGATGACCCTGACCGCC GCCTGGGAAGGCCCCTGCCCAGCCGGCATGGCCCCCGGCGACATGCAGCTCCCCGGCGGCATGACCATCAACATGAACGC GGCGGGGTAA
Upstream 100 bases:
>100_bases CGCAGCTCGGCCATGTGGTGCTCCTCCTTCGGGGCTGAAACCCGCTCGCGCGGCGGATGGCTCCCGGACTAAGGTCCGGG CTCCACGGAGGAGATGCAAG
Downstream 100 bases:
>100_bases CGGGATCCAAGTCCGCCCCTCCTCCCCCGTCGGGGGAGGGGGACCATGCGCAGCATGGTGGTGGGGGCTTGCCGGCGGCT CGGCGGATGGGGCTAGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRRTLVLSLSLAALSPLVLAACQKKTETAEAPAAQAPSAALPAPGAAAPPARKPGLWSQTVTTAGMSQTMKICFDEATDR RMAVYGQTVDQDRCEKNVVTPIAGGWRFESVCDMGSGGKATTSGTATGDFASRYEVKAVTETTGAQAPQMNGRHEMTLTA AWEGPCPAGMAPGDMQLPGGMTINMNAAG
Sequences:
>Translated_189_residues MRRTLVLSLSLAALSPLVLAACQKKTETAEAPAAQAPSAALPAPGAAAPPARKPGLWSQTVTTAGMSQTMKICFDEATDR RMAVYGQTVDQDRCEKNVVTPIAGGWRFESVCDMGSGGKATTSGTATGDFASRYEVKAVTETTGAQAPQMNGRHEMTLTA AWEGPCPAGMAPGDMQLPGGMTINMNAAG >Mature_189_residues MRRTLVLSLSLAALSPLVLAACQKKTETAEAPAAQAPSAALPAPGAAAPPARKPGLWSQTVTTAGMSQTMKICFDEATDR RMAVYGQTVDQDRCEKNVVTPIAGGWRFESVCDMGSGGKATTSGTATGDFASRYEVKAVTETTGAQAPQMNGRHEMTLTA AWEGPCPAGMAPGDMQLPGGMTINMNAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19507; Mature: 19507
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTLVLSLSLAALSPLVLAACQKKTETAEAPAAQAPSAALPAPGAAAPPARKPGLWSQT CCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH VTTAGMSQTMKICFDEATDRRMAVYGQTVDQDRCEKNVVTPIAGGWRFESVCDMGSGGKA HHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCC TTSGTATGDFASRYEVKAVTETTGAQAPQMNGRHEMTLTAAWEGPCPAGMAPGDMQLPGG CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEECCCC MTINMNAAG CEEEEECCC >Mature Secondary Structure MRRTLVLSLSLAALSPLVLAACQKKTETAEAPAAQAPSAALPAPGAAAPPARKPGLWSQT CCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH VTTAGMSQTMKICFDEATDRRMAVYGQTVDQDRCEKNVVTPIAGGWRFESVCDMGSGGKA HHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCC TTSGTATGDFASRYEVKAVTETTGAQAPQMNGRHEMTLTAAWEGPCPAGMAPGDMQLPGG CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEECCCC MTINMNAAG CEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA