| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104249
Identifier: 197104249
GI number: 197104249
Start: 862889
End: 863584
Strand: Reverse
Name: 197104249
Synonym: PHZ_c0783
Alternate gene names: NA
Gene position: 863584-862889 (Counterclockwise)
Preceding gene: 197104250
Following gene: 197104246
Centisome position: 21.61
GC content: 75.57
Gene sequence:
>696_bases ATGGCGCCCCGGCACCTCGAGCGGCACCAGATCGCCCGCATCGGCTGGCTGCGGGCGGCCGTGCTGGGCGCCAACGACGG CATCGTCTCCACAGCCAGCCTGATCGTCGGCGTCGCCGCCGCCGCCCAGGGCCGGGGCGAGATCCTGGTGGCGGGCCTCG CGGCCCTGGTGGCGGGGGCCATGTCGATGGCCGCCGGCGAGTACGTCTCGGTCAGCTCGCAATCCGACACCGAGCGGGCC GACATCGCCCGCGAGACCGCCGAACTGGCCGCCCAGCCCGAGTTCGAGCACGAGGAGCTGGCCGACATCTATGTCCAGCG CGGCCTTTCACCTGCCCTCGCCCGGCAAGTCGCGGACCAGCTGATGGCGAAGGACGCCCTGGCGGCGCATGCGCGGGACG AGCTGGGCATCTCCGACCTGACGACGGCGCGGCCGCTGCAAGCCGCCTTGACCTCGGCGCTGACGTTCGCCGCCGGAGCT GCAGTGCCGCTGGCGACCGCGCTGGTCGCCACGGGGCCGCTGCTCGCACCGGTCACCGCGGGCGTGTCGATCCTCGCCCT GGCGGGCCTGGGCGCGTTCGGCGCGCGGGCGGGCGGCGCGCCGATGCTGAAGGCCGTCGGGCGGGTGACGTTCTGGGGCG CGGCGGCGATGGCGATCACCGCCGGCGTCGGCGCCCTGTTCGGGGTGGCCGCCTGA
Upstream 100 bases:
>100_bases ACCACCCTGCGCGAGGAAGCCGTCGGCGGCGGCTACGTCACGAACGAGGAGTTCGACGAGGTCGTCCGGCCTGAAAAAAT GATCAGCCCGGGTTGATCGG
Downstream 100 bases:
>100_bases CCTACTCGGCCGCGTAGACGACCGGGTGGGCGTGGGCCCACAGGTGGGCGCGGTAGGACTCGAAGCACTGCTCGCCCAGG ATCAGGCGCATGACCGCGCC
Product: nodulin-related protein
Products: NA
Alternate protein names: Nodulin; Nodulin-Related Protein; Iron And Manganese Transporter; Nodulin-Like Protein-Like Protein; Transmembrane Protein; Ypothetical Protein SMU.; Nodulin-Related Transmembrane Protein; Nodulin- Domain-Containing Protein; Nodulin-Related Integral Membrane Protein DUF; Mebrane Associated Protein DUF; Nodulin-
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAPRHLERHQIARIGWLRAAVLGANDGIVSTASLIVGVAAAAQGRGEILVAGLAALVAGAMSMAAGEYVSVSSQSDTERA DIARETAELAAQPEFEHEELADIYVQRGLSPALARQVADQLMAKDALAAHARDELGISDLTTARPLQAALTSALTFAAGA AVPLATALVATGPLLAPVTAGVSILALAGLGAFGARAGGAPMLKAVGRVTFWGAAAMAITAGVGALFGVAA
Sequences:
>Translated_231_residues MAPRHLERHQIARIGWLRAAVLGANDGIVSTASLIVGVAAAAQGRGEILVAGLAALVAGAMSMAAGEYVSVSSQSDTERA DIARETAELAAQPEFEHEELADIYVQRGLSPALARQVADQLMAKDALAAHARDELGISDLTTARPLQAALTSALTFAAGA AVPLATALVATGPLLAPVTAGVSILALAGLGAFGARAGGAPMLKAVGRVTFWGAAAMAITAGVGALFGVAA >Mature_230_residues APRHLERHQIARIGWLRAAVLGANDGIVSTASLIVGVAAAAQGRGEILVAGLAALVAGAMSMAAGEYVSVSSQSDTERAD IARETAELAAQPEFEHEELADIYVQRGLSPALARQVADQLMAKDALAAHARDELGISDLTTARPLQAALTSALTFAAGAA VPLATALVATGPLLAPVTAGVSILALAGLGAFGARAGGAPMLKAVGRVTFWGAAAMAITAGVGALFGVAA
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23038; Mature: 22907
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPRHLERHQIARIGWLRAAVLGANDGIVSTASLIVGVAAAAQGRGEILVAGLAALVAGA CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH MSMAAGEYVSVSSQSDTERADIARETAELAAQPEFEHEELADIYVQRGLSPALARQVADQ HHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH LMAKDALAAHARDELGISDLTTARPLQAALTSALTFAAGAAVPLATALVATGPLLAPVTA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GVSILALAGLGAFGARAGGAPMLKAVGRVTFWGAAAMAITAGVGALFGVAA HHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure APRHLERHQIARIGWLRAAVLGANDGIVSTASLIVGVAAAAQGRGEILVAGLAALVAGA CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH MSMAAGEYVSVSSQSDTERADIARETAELAAQPEFEHEELADIYVQRGLSPALARQVADQ HHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH LMAKDALAAHARDELGISDLTTARPLQAALTSALTFAAGAAVPLATALVATGPLLAPVTA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GVSILALAGLGAFGARAGGAPMLKAVGRVTFWGAAAMAITAGVGALFGVAA HHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA