| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104223
Identifier: 197104223
GI number: 197104223
Start: 834131
End: 835522
Strand: Reverse
Name: 197104223
Synonym: PHZ_c0757
Alternate gene names: NA
Gene position: 835522-834131 (Counterclockwise)
Preceding gene: 197104224
Following gene: 197104221
Centisome position: 20.91
GC content: 68.46
Gene sequence:
>1392_bases ATGGCCCAGGCGCTGCCGAAGGCGTGCATCATCGGCGCGGGCTGTTCCGGCTTCACGACCGCCAAGCGGCTGAAGGACCT GGGCGTGCCGTTCGACTGCTTCGAGATGTCGGACGACATCGGCGGCAACTGGTACTTCAAAAACCCGAACGGCCTGTCGG CCTGCTACGAGAGCCTGCACATCGACACGTCGAAGTGGCGCCTGGCCTTCGAGGACTATCCGGTCCCCGCCGACTGGCCC GACTTCCCGCACCACGCCCAGCTCCTGAAGTACTTCCACGACTACGTGGACCACTTCGGCCTGCGCCCCCTGATCACCTT CAACACCGCGGTCACCCACGCCGAGCGCACGGCGGAGGGGCTCTGGTCGGTGACGCTGTCGACCGGTGAGACTCGCCTCT ACGACGTGCTGTTCGTCTGCAACGGCCACCACTGGGACGCGCGCATCCCGGAGTATCCCGGCGCCTTCGACGGGCCGGCC TTCCACGCCCACGAATACCGCGACCCGTTCGACCCCGTGGACATGCGCGGCAAGAACATCGTCGTCGTCGGCATGGGCAA TTCGGCGATGGACATCGCCTCGGAGCTGTCCCAGCGGCCGATCGCGAGGAACCTCTGGGTCGCCGCCCGGCGCGGCGTCT GGGTGCTGCCGAAGTACATGGACGGCCGGCCGGCGGACAAGGCGGCCCTGCCCCCCTGGTTCCCGCGCAAGCTGGGCCTG GCGCTGGCCCGCAAGAAAATCAAGCGGGCCATCGGGCGGATGGAGGACTACGGCCTGCCCAAGCCCGACCACGAGCCGCT GGAGGCGCACCCGTCCGTCTCGGGCGAGTTCCTGACCCGGGCCGGCTGCGGCGACGTGAAGTTCAAGCCGAACATCGCCG AGCTGATGGGCAAGAAGGTCCGCTTCGAGGACGGCAGCGTCGAGGACGTGGACGCCATCGTCTACGCCACCGGCTACAGG ATCAGCTTCCCGTTCTTCACGGATCCCGAGCTGCTGCCGGACGCCGAGCACCGCTTCCCGCTGTTCAAGCGGATGATGAA GCCGGGAATCCCGAACCTGTTCTTCATGGGCCTGGCCCAGCCCCTGCCGACGCTGGTCAACTTCGCCGAGCAGCAGGCCA AGCTCGCCGGCGCCTACCTCGTGGGCCGCTACAAGCCGCCCGCGCCCGCGGAGATGGCGCAGGTCACCGCCAAGGACGAG GCCCTGCACCTCGGCCCCTACTACAAGTCGGCCAGGCACACGATCCAGGTGGACTTCGGGATCTACGTCCACGACCTCCT GAAGGAGATCGAGCGCGGCGGGAAGCGGGCGAAGGCCGCCGGCTACGCCCTGCCAGTTCCCGCCCGCGCGGTCAGCGCGT CACGATCGGAAAGTCCGGCCGCGGCGGCGTGA
Upstream 100 bases:
>100_bases GCGCGCTGGTGTGAGGCGGCGTCCCTCCCGGCAAGGGAGGGTTGCCCGCCCCCACGGAAGGCCGTGAAACTCTCCCCGAC GACTTAGGGGAGAAACCACC
Downstream 100 bases:
>100_bases GGAAGCCCAGCAGGCGGACGAGCGCCCCGGCTTCGCCCTCCGAGGCCGCCGGCGGCCTGGCCCCCGCCAGGGCCGCCGCC AGGAACTGGGCCCGCGGCAG
Product: monooxygenase, flavin-binding family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MAQALPKACIIGAGCSGFTTAKRLKDLGVPFDCFEMSDDIGGNWYFKNPNGLSACYESLHIDTSKWRLAFEDYPVPADWP DFPHHAQLLKYFHDYVDHFGLRPLITFNTAVTHAERTAEGLWSVTLSTGETRLYDVLFVCNGHHWDARIPEYPGAFDGPA FHAHEYRDPFDPVDMRGKNIVVVGMGNSAMDIASELSQRPIARNLWVAARRGVWVLPKYMDGRPADKAALPPWFPRKLGL ALARKKIKRAIGRMEDYGLPKPDHEPLEAHPSVSGEFLTRAGCGDVKFKPNIAELMGKKVRFEDGSVEDVDAIVYATGYR ISFPFFTDPELLPDAEHRFPLFKRMMKPGIPNLFFMGLAQPLPTLVNFAEQQAKLAGAYLVGRYKPPAPAEMAQVTAKDE ALHLGPYYKSARHTIQVDFGIYVHDLLKEIERGGKRAKAAGYALPVPARAVSASRSESPAAAA
Sequences:
>Translated_463_residues MAQALPKACIIGAGCSGFTTAKRLKDLGVPFDCFEMSDDIGGNWYFKNPNGLSACYESLHIDTSKWRLAFEDYPVPADWP DFPHHAQLLKYFHDYVDHFGLRPLITFNTAVTHAERTAEGLWSVTLSTGETRLYDVLFVCNGHHWDARIPEYPGAFDGPA FHAHEYRDPFDPVDMRGKNIVVVGMGNSAMDIASELSQRPIARNLWVAARRGVWVLPKYMDGRPADKAALPPWFPRKLGL ALARKKIKRAIGRMEDYGLPKPDHEPLEAHPSVSGEFLTRAGCGDVKFKPNIAELMGKKVRFEDGSVEDVDAIVYATGYR ISFPFFTDPELLPDAEHRFPLFKRMMKPGIPNLFFMGLAQPLPTLVNFAEQQAKLAGAYLVGRYKPPAPAEMAQVTAKDE ALHLGPYYKSARHTIQVDFGIYVHDLLKEIERGGKRAKAAGYALPVPARAVSASRSESPAAAA >Mature_462_residues AQALPKACIIGAGCSGFTTAKRLKDLGVPFDCFEMSDDIGGNWYFKNPNGLSACYESLHIDTSKWRLAFEDYPVPADWPD FPHHAQLLKYFHDYVDHFGLRPLITFNTAVTHAERTAEGLWSVTLSTGETRLYDVLFVCNGHHWDARIPEYPGAFDGPAF HAHEYRDPFDPVDMRGKNIVVVGMGNSAMDIASELSQRPIARNLWVAARRGVWVLPKYMDGRPADKAALPPWFPRKLGLA LARKKIKRAIGRMEDYGLPKPDHEPLEAHPSVSGEFLTRAGCGDVKFKPNIAELMGKKVRFEDGSVEDVDAIVYATGYRI SFPFFTDPELLPDAEHRFPLFKRMMKPGIPNLFFMGLAQPLPTLVNFAEQQAKLAGAYLVGRYKPPAPAEMAQVTAKDEA LHLGPYYKSARHTIQVDFGIYVHDLLKEIERGGKRAKAAGYALPVPARAVSASRSESPAAAA
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Homo sapiens, GI221316672, Length=436, Percent_Identity=35.7798165137615, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI221316674, Length=420, Percent_Identity=35.4761904761905, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI4503757, Length=448, Percent_Identity=33.0357142857143, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI4503759, Length=445, Percent_Identity=28.7640449438202, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI4503755, Length=453, Percent_Identity=30.242825607064, Blast_Score=179, Evalue=7e-45, Organism=Homo sapiens, GI50541965, Length=444, Percent_Identity=29.954954954955, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI50541961, Length=444, Percent_Identity=29.954954954955, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI221316678, Length=275, Percent_Identity=37.4545454545455, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17541300, Length=449, Percent_Identity=34.5211581291759, Blast_Score=224, Evalue=7e-59, Organism=Caenorhabditis elegans, GI25150462, Length=454, Percent_Identity=32.8193832599119, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI25145785, Length=435, Percent_Identity=29.4252873563218, Blast_Score=216, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17561948, Length=448, Percent_Identity=32.8125, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17555726, Length=451, Percent_Identity=32.5942350332594, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI193202226, Length=217, Percent_Identity=32.7188940092166, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17506045, Length=212, Percent_Identity=29.7169811320755, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI19921694, Length=216, Percent_Identity=27.7777777777778, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI19922866, Length=211, Percent_Identity=27.0142180094787, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020946 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 51474; Mature: 51343
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQALPKACIIGAGCSGFTTAKRLKDLGVPFDCFEMSDDIGGNWYFKNPNGLSACYESLH CCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHHHC IDTSKWRLAFEDYPVPADWPDFPHHAQLLKYFHDYVDHFGLRPLITFNTAVTHAERTAEG CCCHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCC LWSVTLSTGETRLYDVLFVCNGHHWDARIPEYPGAFDGPAFHAHEYRDPFDPVDMRGKNI EEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VVVGMGNSAMDIASELSQRPIARNLWVAARRGVWVLPKYMDGRPADKAALPPWFPRKLGL EEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHH ALARKKIKRAIGRMEDYGLPKPDHEPLEAHPSVSGEFLTRAGCGDVKFKPNIAELMGKKV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEECCCHHHHCCCEE RFEDGSVEDVDAIVYATGYRISFPFFTDPELLPDAEHRFPLFKRMMKPGIPNLFFMGLAQ ECCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHH PLPTLVNFAEQQAKLAGAYLVGRYKPPAPAEMAQVTAKDEALHLGPYYKSARHTIQVDFG HHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCEEECCCHHHCCCEEEEEECC IYVHDLLKEIERGGKRAKAAGYALPVPARAVSASRSESPAAAA HHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCC >Mature Secondary Structure AQALPKACIIGAGCSGFTTAKRLKDLGVPFDCFEMSDDIGGNWYFKNPNGLSACYESLH CCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHHHC IDTSKWRLAFEDYPVPADWPDFPHHAQLLKYFHDYVDHFGLRPLITFNTAVTHAERTAEG CCCHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCC LWSVTLSTGETRLYDVLFVCNGHHWDARIPEYPGAFDGPAFHAHEYRDPFDPVDMRGKNI EEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VVVGMGNSAMDIASELSQRPIARNLWVAARRGVWVLPKYMDGRPADKAALPPWFPRKLGL EEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHH ALARKKIKRAIGRMEDYGLPKPDHEPLEAHPSVSGEFLTRAGCGDVKFKPNIAELMGKKV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEECCCHHHHCCCEE RFEDGSVEDVDAIVYATGYRISFPFFTDPELLPDAEHRFPLFKRMMKPGIPNLFFMGLAQ ECCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHH PLPTLVNFAEQQAKLAGAYLVGRYKPPAPAEMAQVTAKDEALHLGPYYKSARHTIQVDFG HHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCEEECCCHHHCCCEEEEEECC IYVHDLLKEIERGGKRAKAAGYALPVPARAVSASRSESPAAAA HHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]