| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104207
Identifier: 197104207
GI number: 197104207
Start: 813262
End: 813639
Strand: Reverse
Name: 197104207
Synonym: PHZ_c0741
Alternate gene names: NA
Gene position: 813639-813262 (Counterclockwise)
Preceding gene: 197104208
Following gene: 197104202
Centisome position: 20.36
GC content: 70.9
Gene sequence:
>378_bases ATGACCGACAAGCCCAGCCTCGAAGGCATGCGCGTCCTCGTCGTCGAGGATGAGATGATGGTCTCGATGCTGATCGAGGA CATGCTGGCGGACCTGGGCTGCACGGTCGTCGGCCCCGCCTCGCGCCTGGACGAGGCCATCGCACTCGCCAAGGAAGCCG ACCTGGACTGCGCCGTCCTGGACGTGAACCTGGGCGGACAGCCGATCTTCCCGCTCGCCGACCTGCTGCGCGAGCGCGGC GCGCCGTTCGCCTTCGCCACCGGCTACGGGGATGCGGGTCTGCGGGAAGTGGATCGCGGCTCGCCCGTCCTGCAGAAGCC GTTCCGCGAGGGCGACCTGGCCCGCGTGCTGGGCGAGCTGAGGGCGGCGGCCGCCTAG
Upstream 100 bases:
>100_bases GGCGCCCGGGCCCCGCCCCCCGTTCAGCCGCTGTTCAAGCGGCGTGGCATGTGGTTAGGCGATGCAGAACCTCAAGGAAT CTGGCGCCGGAGCCCCCAGC
Downstream 100 bases:
>100_bases AGGTATTCGAGCGCGCGCGCCGCCAGGCCCTGGGCCAGGAAGGCCGTCGAGCCGATCAGCGCCGCCAGCGAAAGTAGGAT CTTCACGTCCCGTCTCCTTG
Product: response regulator
Products: NA
Alternate protein names: Response Regulator Receiver; Signal Transduction Histidine Kinase; Two-Component Response Regulator Protein; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator; Two-Component System Regulatory Protein; Response Regulator Receiver Modulated GAF Sensor Protein; PAS/PAC Sensor Protein; Response Regulator; Bacteriophytochrome Protein; Response Regulator Receiver Domain Protein; Regulatory Protein; Bacteriophytochrome; CheY-Like Response Regulator; Two Component Response Regulator; PAS-Family Sensor Histidine Kinase/Receiver Protein; Histidine Kinase; PAS Sensor Protein; 2-Component Receiver Domain Protein; Response Regulator Receiver/SARP Domain-Containing Protein; Response Regulator Recevier Domain Protein; Two-Component Sensor Histidine Kinase; Two-Component Receiver Domain-Containing Protein; Phytochrome Protein; Crp/Fnr Family Transcriptional Regulator; Response Regulator/Sensor Histidine Kinase; Two-Component System Response Regulator; Response Regulator Receiver And SARP Domain Protein; Phytochrome/Sensor Histidine Kinase; Sensor Histidine Kinase/Response Regulator; PAS-Family Sensor Histidine Kinase
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MTDKPSLEGMRVLVVEDEMMVSMLIEDMLADLGCTVVGPASRLDEAIALAKEADLDCAVLDVNLGGQPIFPLADLLRERG APFAFATGYGDAGLREVDRGSPVLQKPFREGDLARVLGELRAAAA
Sequences:
>Translated_125_residues MTDKPSLEGMRVLVVEDEMMVSMLIEDMLADLGCTVVGPASRLDEAIALAKEADLDCAVLDVNLGGQPIFPLADLLRERG APFAFATGYGDAGLREVDRGSPVLQKPFREGDLARVLGELRAAAA >Mature_124_residues TDKPSLEGMRVLVVEDEMMVSMLIEDMLADLGCTVVGPASRLDEAIALAKEADLDCAVLDVNLGGQPIFPLADLLRERGA PFAFATGYGDAGLREVDRGSPVLQKPFREGDLARVLGELRAAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13288; Mature: 13156
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKPSLEGMRVLVVEDEMMVSMLIEDMLADLGCTVVGPASRLDEAIALAKEADLDCAVL CCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCCEEEE DVNLGGQPIFPLADLLRERGAPFAFATGYGDAGLREVDRGSPVLQKPFREGDLARVLGEL EECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHCCCCCHHHCCCCCCHHHHHHHHH RAAAA HHHCC >Mature Secondary Structure TDKPSLEGMRVLVVEDEMMVSMLIEDMLADLGCTVVGPASRLDEAIALAKEADLDCAVL CCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCCEEEE DVNLGGQPIFPLADLLRERGAPFAFATGYGDAGLREVDRGSPVLQKPFREGDLARVLGEL EECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHCCCCCHHHCCCCCCHHHHHHHHH RAAAA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA