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The map label for this gene is yfjD [H]

Identifier: 197104208

GI number: 197104208

Start: 813833

End: 815119

Strand: Reverse

Name: yfjD [H]

Synonym: PHZ_c0742

Alternate gene names: 197104208

Gene position: 815119-813833 (Counterclockwise)

Preceding gene: 197104209

Following gene: 197104207

Centisome position: 20.4

GC content: 68.45

Gene sequence:

>1287_bases
GTGATCGGCGCGATCATCGTCGCCCTGGCCCCTTCCCTGGTCGTCCTGCTGCTGCTCTCGGCCCTGATGTCGGCGACCGA
GACGTCGATGACCGCGGCGAGCCGCGGGCGCATGCACCAGCTCGAGCGCGAGGGCGATCCCGCCGCGCGGCGGGTGAACC
GGCTGATCTCGGACCAGGAGAAGCTGATCGGCGCGATCCTGATCGGCAACAACGTCGTCAACATCTTCGCCTCGGCGCTG
ACGACCTCGGTGCTGACGCAGGCGTTTCCGGGACCGGCCGGCGCGCTGATCGCCACCGGCGTGATGACGGTGCTGGTCGT
GGTGTTCGCCGAGATCCTGCCCAAGACCGTCGCCATCGCCCAGGCCGACAACGCCGCGCGCGCCCTGTCCCTGCCGGCCC
AGTGGACGGTGAGGATCTTCGGCCCCCTGGCGAACGGCGCCCAGTGGATCGTCCGACGCACGCTGCGCCCGTTCGGCATC
CGCCTGTCGATGGAGACCGACGTCCTCGCCGCCCACGAGGAGATCCGCGGGGCGGTGGAGTACCACCACTCGGAGGGGCT
GGTGGAGACGCGGGACCGCTGGATGCTGGGCGGGGTGCTGGACCTGGCCGAGATGGACGTCTCGGAGGTGATGGTCCACC
GCCGCTCGATCGTGATGATCGACGGCGACAAGCCCCCTCGGGAAATCCTGAACGAGGCGCTGGCGCAGGGCCATACGCGC
CTGCCCATCTACCGCGACGAACCGGAGAACATCGTTGGGGTCCTGCATGTGAAGGACCTCCTGAAGGCGATCGCCGACGC
CGACGGCGACATCGACGCCGTCAGGATCGCGGGCATCCTGCGGACGCCCTGGTTCGTGCCCGAGACCACCAGCCTGAAGG
ACCAGCTGGCCGCCTTCCTGAAGCGCCAGAACCACTTCGCCCTGGTGGTGGACGAGTACGGCGCCATCCAAGGTCTGGTG
ACTCTGGAGGACATCCTCGAGGAGATCGTCGGCGAGATCGAGGACGAGCACGACGTGGTCGCGCCGGGCGTCAATCCGCG
GCCCGACGGCTGGGTGTCGGTCGAGGGATCGGTGACCATCCGCGACCTGAACCGGGCAATGAACTGGGAGCTGCCGGACG
ACGAGGCGGTGACGGTCGCCGGCCTGTTGATCAACGAATGCCAGCGCATTCCCGAGGTGGACGAGACCTTCGCCTTCCAC
CGCCATCGCTTCCGGGTGGTGGAGCGGCGCGGCAACCAGCTCACCCTGCTCGACGTCTCCCCGCCCGAACAAGCTGTGGA
TGATTGA

Upstream 100 bases:

>100_bases
TGACGTTCATCCTGGCGCGGGGCCTCGGCAGCGCCTTCACCGCCAAGGACGTGGAGGCGCAGGCCGTGCGCCGCTTCCTG
GTCGCGGAGGGAGCCCGGCC

Downstream 100 bases:

>100_bases
GCCGCCCTGCGGAACCCACGGCGCAGCTTATCGTTTGATCCGTGTTCGCCGCCGCTGGGGGTCCGTCGAATTGAGGTCGC
ATACACGCCGCACGGCGCCC

Product: putative Mg2+ and Co2+ transporter CorB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MIGAIIVALAPSLVVLLLLSALMSATETSMTAASRGRMHQLEREGDPAARRVNRLISDQEKLIGAILIGNNVVNIFASAL
TTSVLTQAFPGPAGALIATGVMTVLVVVFAEILPKTVAIAQADNAARALSLPAQWTVRIFGPLANGAQWIVRRTLRPFGI
RLSMETDVLAAHEEIRGAVEYHHSEGLVETRDRWMLGGVLDLAEMDVSEVMVHRRSIVMIDGDKPPREILNEALAQGHTR
LPIYRDEPENIVGVLHVKDLLKAIADADGDIDAVRIAGILRTPWFVPETTSLKDQLAAFLKRQNHFALVVDEYGAIQGLV
TLEDILEEIVGEIEDEHDVVAPGVNPRPDGWVSVEGSVTIRDLNRAMNWELPDDEAVTVAGLLINECQRIPEVDETFAFH
RHRFRVVERRGNQLTLLDVSPPEQAVDD

Sequences:

>Translated_428_residues
MIGAIIVALAPSLVVLLLLSALMSATETSMTAASRGRMHQLEREGDPAARRVNRLISDQEKLIGAILIGNNVVNIFASAL
TTSVLTQAFPGPAGALIATGVMTVLVVVFAEILPKTVAIAQADNAARALSLPAQWTVRIFGPLANGAQWIVRRTLRPFGI
RLSMETDVLAAHEEIRGAVEYHHSEGLVETRDRWMLGGVLDLAEMDVSEVMVHRRSIVMIDGDKPPREILNEALAQGHTR
LPIYRDEPENIVGVLHVKDLLKAIADADGDIDAVRIAGILRTPWFVPETTSLKDQLAAFLKRQNHFALVVDEYGAIQGLV
TLEDILEEIVGEIEDEHDVVAPGVNPRPDGWVSVEGSVTIRDLNRAMNWELPDDEAVTVAGLLINECQRIPEVDETFAFH
RHRFRVVERRGNQLTLLDVSPPEQAVDD
>Mature_428_residues
MIGAIIVALAPSLVVLLLLSALMSATETSMTAASRGRMHQLEREGDPAARRVNRLISDQEKLIGAILIGNNVVNIFASAL
TTSVLTQAFPGPAGALIATGVMTVLVVVFAEILPKTVAIAQADNAARALSLPAQWTVRIFGPLANGAQWIVRRTLRPFGI
RLSMETDVLAAHEEIRGAVEYHHSEGLVETRDRWMLGGVLDLAEMDVSEVMVHRRSIVMIDGDKPPREILNEALAQGHTR
LPIYRDEPENIVGVLHVKDLLKAIADADGDIDAVRIAGILRTPWFVPETTSLKDQLAAFLKRQNHFALVVDEYGAIQGLV
TLEDILEEIVGEIEDEHDVVAPGVNPRPDGWVSVEGSVTIRDLNRAMNWELPDDEAVTVAGLLINECQRIPEVDETFAFH
RHRFRVVERRGNQLTLLDVSPPEQAVDD

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=389, Percent_Identity=26.2210796915167, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI94681046, Length=304, Percent_Identity=26.6447368421053, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI40068053, Length=340, Percent_Identity=26.1764705882353, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI40068055, Length=342, Percent_Identity=26.3157894736842, Blast_Score=84, Evalue=3e-16,
Organism=Escherichia coli, GI145693175, Length=405, Percent_Identity=35.0617283950617, Blast_Score=227, Evalue=1e-60,
Organism=Escherichia coli, GI1790664, Length=425, Percent_Identity=21.4117647058824, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1786879, Length=241, Percent_Identity=30.7053941908714, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI87082033, Length=251, Percent_Identity=31.4741035856574, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788119, Length=246, Percent_Identity=29.6747967479675, Blast_Score=97, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17539402, Length=297, Percent_Identity=28.6195286195286, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI71980512, Length=364, Percent_Identity=25.8241758241758, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 46911; Mature: 46911

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGAIIVALAPSLVVLLLLSALMSATETSMTAASRGRMHQLEREGDPAARRVNRLISDQE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHH
KLIGAILIGNNVVNIFASALTTSVLTQAFPGPAGALIATGVMTVLVVVFAEILPKTVAIA
HHHEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
QADNAARALSLPAQWTVRIFGPLANGAQWIVRRTLRPFGIRLSMETDVLAAHEEIRGAVE
CCCCCHHEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHH
YHHSEGLVETRDRWMLGGVLDLAEMDVSEVMVHRRSIVMIDGDKPPREILNEALAQGHTR
HHCCCCCHHHCCHHHHHHHHHHHHCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCC
LPIYRDEPENIVGVLHVKDLLKAIADADGDIDAVRIAGILRTPWFVPETTSLKDQLAAFL
CCEECCCCCHHEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
KRQNHFALVVDEYGAIQGLVTLEDILEEIVGEIEDEHDVVAPGVNPRPDGWVSVEGSVTI
HCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEECCCEEE
RDLNRAMNWELPDDEAVTVAGLLINECQRIPEVDETFAFHRHRFRVVERRGNQLTLLDVS
EEHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
PPEQAVDD
CCHHHCCC
>Mature Secondary Structure
MIGAIIVALAPSLVVLLLLSALMSATETSMTAASRGRMHQLEREGDPAARRVNRLISDQE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHH
KLIGAILIGNNVVNIFASALTTSVLTQAFPGPAGALIATGVMTVLVVVFAEILPKTVAIA
HHHEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
QADNAARALSLPAQWTVRIFGPLANGAQWIVRRTLRPFGIRLSMETDVLAAHEEIRGAVE
CCCCCHHEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHH
YHHSEGLVETRDRWMLGGVLDLAEMDVSEVMVHRRSIVMIDGDKPPREILNEALAQGHTR
HHCCCCCHHHCCHHHHHHHHHHHHCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCC
LPIYRDEPENIVGVLHVKDLLKAIADADGDIDAVRIAGILRTPWFVPETTSLKDQLAAFL
CCEECCCCCHHEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
KRQNHFALVVDEYGAIQGLVTLEDILEEIVGEIEDEHDVVAPGVNPRPDGWVSVEGSVTI
HCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEECCCEEE
RDLNRAMNWELPDDEAVTVAGLLINECQRIPEVDETFAFHRHRFRVVERRGNQLTLLDVS
EEHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
PPEQAVDD
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]