| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104172
Identifier: 197104172
GI number: 197104172
Start: 772884
End: 774437
Strand: Reverse
Name: 197104172
Synonym: PHZ_c0706
Alternate gene names: NA
Gene position: 774437-772884 (Counterclockwise)
Preceding gene: 197104173
Following gene: 197104171
Centisome position: 19.38
GC content: 68.98
Gene sequence:
>1554_bases GTGCGCGAGCGGGCGACCGAAGCGGCGGCGGGACGCGGCGATCCGGCGCCCGCACGGGCCGATCCGCAACTGGACTGCGA GGTCCTGATCGTCGGCGCCGGGCTCTCGGGCCTGGCCACCGCGGTCTATCTGCAGAAGAGCGGGATCGACGACGTCCTCC TCCTGGAGCGCTCGCACACCCTGGGCGGCACCTGGCGGGACAACACCTATCCCGGCTGCACGGTGGATCTGCCCACCATC TACTACTCGTTCTCCTTCGCGCCGCTGTTCGACTGGTCGACCTTCTACGCGCCGCAGTCGGAGCTGTTCTCCTACTGCCG GATGATCGCGGACAAGCACGGGCTGACCGGGAAGATCCGCTGCGACAGCCTGGTCAGCGCCTGCCGCTATGACGCCGCCG CCAACGTGTGGATCACCGAGCTCGCGGACGGCCGGCGGTTCGTTTCCCGCTACCTGACGGTCGCCACGGGGCTCTTCTCG ACGCCGAACCTGCCGGATATCGAAGGCGTCGAGCGCTTTCGCGGCAAGGTCTTCCACTCCACGGCCTGGGATCACAGCTA CGACTTGCGGAGCAAGACCGCGGCGGTGATCGGCAACGGCGCCACGGGCGTGCAGATCATCCCGGAGGTGGCCGAGGTGG TCGACCGGCTCGACGTCTACCAGCGCACGCCCACCTGGGTGCTGCCCAAGCCGGACAAGCCGCTCAGCCCGCGCATGAAG TGGGCGCTGAAGCACGTGCCGGGCTTCGCCTACCTGCTGCGGCAGCTCGCCTTCCTTGTCATCGACATCCCGCTGTACGG CATCCTGATCGACCATCCGCGCTTCCGCTGGCTGGCCAAGCGCCTGGAGAGGGTGTGCGTGGAGCACATCCGCCGCGAGC TTCCCGATCCGGAGCTGCAGGCGAAGATGATCCCCACCTTCGACTTCGGCTGCCGCCGCCCCACCTGGAGCAACAAGTAC TACAAGGCCTTCCGGCGGCCGAACGTGCGCCTCGTCACCGACCGCATCGCGCGGGTGACGGAGGACTCGATCGTCACGGC CGACGGCGAGGAGCGGAAGATCGACGCGATCATCCTCGCGACCGGCTTCCGGCGCGGCGAGCGGCACACCCAGCCGACGA TCCCCATCTTCGGAAAGGGCGGCCAGGAGCTCGAGGATTTCTGGGACGCGCAGGGCCGGCAGGCCTTCAAGGGCGTCTCG ATCACCGGCTTCCCCAACCTCTTCCTCACGTTCGGCCCCTACAGCGTGAACAGCCTGTCCTTCATCCGGATGATGGAGGC CTCGGCCTTCCACATCGCCCGGGTGATGCGGGCCGCCCGCGCCCGCAGGGCCAACTATGTGGAGGTGACGCCCGAGGCGC AGGCTCGCGACCAGGAGCTGATGACCCGCCTCAGCACGCGGAACATCTTCCTGCACGGGCAGTGCGCGGGCGCCCTGCCC GCCGACACGCTCAAGGCGCCGCGCGGCGGCCTGCGCCCGCGCAACAGCCTCGCCTCGTGGCTGGAGCAGCAGACCTTCCG CCTGTCGAGCTACGCCTTCGCCCGCAAGGGCTGA
Upstream 100 bases:
>100_bases GAGGGGCGGATGGCAGGTGTCCTCGCCGGGCGGGAGACGGGCTGCGGACGGGCGGAAGCCCGCGACGGCCGCCAGCAGGC GGCGGTCGCCCATGTCTGAG
Downstream 100 bases:
>100_bases GGACTCGAATCTCTTGGGTGAGATCGCCGGATCTCAGCCAGACATGCATGCAATCGACTGACCGACACGTGAGCGCGGGC GGGTCTTTGGCGCGCCGCGA
Product: flavin-containing monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MRERATEAAAGRGDPAPARADPQLDCEVLIVGAGLSGLATAVYLQKSGIDDVLLLERSHTLGGTWRDNTYPGCTVDLPTI YYSFSFAPLFDWSTFYAPQSELFSYCRMIADKHGLTGKIRCDSLVSACRYDAAANVWITELADGRRFVSRYLTVATGLFS TPNLPDIEGVERFRGKVFHSTAWDHSYDLRSKTAAVIGNGATGVQIIPEVAEVVDRLDVYQRTPTWVLPKPDKPLSPRMK WALKHVPGFAYLLRQLAFLVIDIPLYGILIDHPRFRWLAKRLERVCVEHIRRELPDPELQAKMIPTFDFGCRRPTWSNKY YKAFRRPNVRLVTDRIARVTEDSIVTADGEERKIDAIILATGFRRGERHTQPTIPIFGKGGQELEDFWDAQGRQAFKGVS ITGFPNLFLTFGPYSVNSLSFIRMMEASAFHIARVMRAARARRANYVEVTPEAQARDQELMTRLSTRNIFLHGQCAGALP ADTLKAPRGGLRPRNSLASWLEQQTFRLSSYAFARKG
Sequences:
>Translated_517_residues MRERATEAAAGRGDPAPARADPQLDCEVLIVGAGLSGLATAVYLQKSGIDDVLLLERSHTLGGTWRDNTYPGCTVDLPTI YYSFSFAPLFDWSTFYAPQSELFSYCRMIADKHGLTGKIRCDSLVSACRYDAAANVWITELADGRRFVSRYLTVATGLFS TPNLPDIEGVERFRGKVFHSTAWDHSYDLRSKTAAVIGNGATGVQIIPEVAEVVDRLDVYQRTPTWVLPKPDKPLSPRMK WALKHVPGFAYLLRQLAFLVIDIPLYGILIDHPRFRWLAKRLERVCVEHIRRELPDPELQAKMIPTFDFGCRRPTWSNKY YKAFRRPNVRLVTDRIARVTEDSIVTADGEERKIDAIILATGFRRGERHTQPTIPIFGKGGQELEDFWDAQGRQAFKGVS ITGFPNLFLTFGPYSVNSLSFIRMMEASAFHIARVMRAARARRANYVEVTPEAQARDQELMTRLSTRNIFLHGQCAGALP ADTLKAPRGGLRPRNSLASWLEQQTFRLSSYAFARKG >Mature_517_residues MRERATEAAAGRGDPAPARADPQLDCEVLIVGAGLSGLATAVYLQKSGIDDVLLLERSHTLGGTWRDNTYPGCTVDLPTI YYSFSFAPLFDWSTFYAPQSELFSYCRMIADKHGLTGKIRCDSLVSACRYDAAANVWITELADGRRFVSRYLTVATGLFS TPNLPDIEGVERFRGKVFHSTAWDHSYDLRSKTAAVIGNGATGVQIIPEVAEVVDRLDVYQRTPTWVLPKPDKPLSPRMK WALKHVPGFAYLLRQLAFLVIDIPLYGILIDHPRFRWLAKRLERVCVEHIRRELPDPELQAKMIPTFDFGCRRPTWSNKY YKAFRRPNVRLVTDRIARVTEDSIVTADGEERKIDAIILATGFRRGERHTQPTIPIFGKGGQELEDFWDAQGRQAFKGVS ITGFPNLFLTFGPYSVNSLSFIRMMEASAFHIARVMRAARARRANYVEVTPEAQARDQELMTRLSTRNIFLHGQCAGALP ADTLKAPRGGLRPRNSLASWLEQQTFRLSSYAFARKG
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Homo sapiens, GI4503755, Length=357, Percent_Identity=23.5294117647059, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI4503757, Length=357, Percent_Identity=23.249299719888, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI25145785, Length=351, Percent_Identity=23.3618233618234, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020946 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 58228; Mature: 58228
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRERATEAAAGRGDPAPARADPQLDCEVLIVGAGLSGLATAVYLQKSGIDDVLLLERSHT CCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCC LGGTWRDNTYPGCTVDLPTIYYSFSFAPLFDWSTFYAPQSELFSYCRMIADKHGLTGKIR CCCCCCCCCCCCCEEECCCEEEEECCCEEECCHHHCCCHHHHHHHHHHHHHCCCCCEEEE CDSLVSACRYDAAANVWITELADGRRFVSRYLTVATGLFSTPNLPDIEGVERFRGKVFHS HHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEEEC TAWDHSYDLRSKTAAVIGNGATGVQIIPEVAEVVDRLDVYQRTPTWVLPKPDKPLSPRMK CCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHH WALKHVPGFAYLLRQLAFLVIDIPLYGILIDHPRFRWLAKRLERVCVEHIRRELPDPELQ HHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCC AKMIPTFDFGCRRPTWSNKYYKAFRRPNVRLVTDRIARVTEDSIVTADGEERKIDAIILA EEECCCCCCCCCCCCCCCHHHHHHCCCCCEEHHHHHHHHCCCCEEECCCCCCEEEEEEEE TGFRRGERHTQPTIPIFGKGGQELEDFWDAQGRQAFKGVSITGFPNLFLTFGPYSVNSLS CCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCHHHHCCCEEECCCCEEEEECCCCCCHHH FIRMMEASAFHIARVMRAARARRANYVEVTPEAQARDQELMTRLSTRNIFLHGQCAGALP HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCC ADTLKAPRGGLRPRNSLASWLEQQTFRLSSYAFARKG HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRERATEAAAGRGDPAPARADPQLDCEVLIVGAGLSGLATAVYLQKSGIDDVLLLERSHT CCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCC LGGTWRDNTYPGCTVDLPTIYYSFSFAPLFDWSTFYAPQSELFSYCRMIADKHGLTGKIR CCCCCCCCCCCCCEEECCCEEEEECCCEEECCHHHCCCHHHHHHHHHHHHHCCCCCEEEE CDSLVSACRYDAAANVWITELADGRRFVSRYLTVATGLFSTPNLPDIEGVERFRGKVFHS HHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEEEC TAWDHSYDLRSKTAAVIGNGATGVQIIPEVAEVVDRLDVYQRTPTWVLPKPDKPLSPRMK CCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHH WALKHVPGFAYLLRQLAFLVIDIPLYGILIDHPRFRWLAKRLERVCVEHIRRELPDPELQ HHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCC AKMIPTFDFGCRRPTWSNKYYKAFRRPNVRLVTDRIARVTEDSIVTADGEERKIDAIILA EEECCCCCCCCCCCCCCCHHHHHHCCCCCEEHHHHHHHHCCCCEEECCCCCCEEEEEEEE TGFRRGERHTQPTIPIFGKGGQELEDFWDAQGRQAFKGVSITGFPNLFLTFGPYSVNSLS CCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCHHHHCCCEEECCCCEEEEECCCCCCHHH FIRMMEASAFHIARVMRAARARRANYVEVTPEAQARDQELMTRLSTRNIFLHGQCAGALP HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCC ADTLKAPRGGLRPRNSLASWLEQQTFRLSSYAFARKG HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]