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The map label for this gene is yhbV [H]

Identifier: 197104145

GI number: 197104145

Start: 737435

End: 738349

Strand: Reverse

Name: yhbV [H]

Synonym: PHZ_c0679

Alternate gene names: 197104145

Gene position: 738349-737435 (Counterclockwise)

Preceding gene: 197104146

Following gene: 197104144

Centisome position: 18.48

GC content: 75.52

Gene sequence:

>915_bases
ATGAGCGGGCGCCTGGAGATCACCGTCGGCCCCCTGCTGTTCAACTGGCCGGCCGAGGCGGTGCGGACGTTCTACCGCCG
CGTCGCGGACGATCCGGCCGTCGACCGCGTCTACCTGGGCGAGGTGGTCTGCGGAAAACGCGGGCCGCTGCTGGCCGACG
CCCTGGCCGAGTCGGCCGAGGCGCTGGAGGCCGGCGGCAAGACCGTGGTCTGGTCGACCCTCGCCCTGCCCGCCAATCGG
CGCGAACTGCGGGCCAGCGCCGCGCTCGTGGAGGCGGGCGGTCCCGTTGAGATCAACGACATCTCGGCCCTGGCCCGTGC
CTCCACCGGGGCGCCCGCCGGGACGCCGTTCGTCGCCGGGCCGTTCCTCAACGTCTACAACGAGGCGGCGGCGCGCGAGC
TGATGCGGCGCGGCTGCGTGCGGCTGTGCGCCAACATCGAGCTCTCGCTCGGCGCGGTGGCCGCCATCGCCCGCGGCTGC
CCCGGGCTGGAGGTGGAGCTGTTCGCCTACGGCCGCCTGCCGCTCGCCCTGTCCGGGCGCTGCTACCACGCCCGCCTGCA
CGGGCTGCACAAGGACGCCTGCCAGTTCGTCTGCGAGCGCGACCCGGACGGCCTCGCCGTCGCCACGGTGGAGGCCACGC
CCTTCCTGGCGATGAACGGCGTCCAGACGCTGTCCCACGGGGTGCACGTGGTCGATGTCGAGCCGGCGCGGCTGCGGGAG
GCCGGCGTCGGCGCGCTGCGCCTCTCCCCTCACACCGGCGACATGGCCGCGGTCTCGGCCGCCTTCCGCCGCTTCGCCGA
CGGGCGCTCCTCGCCGCCCGAACTGCGGGCCGCGCTCGCCGCGGCAGGGCCGCCCGGTCCGCTCGTCAACGGCTACGTCC
ACGGCGCGCGCGGCCTCGAGCTCCTGGACGCTTGA

Upstream 100 bases:

>100_bases
CCCTCGAGCGCGGCGAGGACCTCGCGCCCTGGGAAGGCCGTCTCGCCGATCTCGCCGAGGGCGGCCGCGAGACGGCCGGC
GCCTACCGGAAGCGCTGGCG

Downstream 100 bases:

>100_bases
TGACCACCACCCTGCATCCCTGCGACGTCGTGGTGATCGGCGGCGGCGTCGCGGGCGCGGCGATCGCCGCCTTCCTGGCC
CCCTGGCGGCGCGTGGTGGT

Product: collagenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSGRLEITVGPLLFNWPAEAVRTFYRRVADDPAVDRVYLGEVVCGKRGPLLADALAESAEALEAGGKTVVWSTLALPANR
RELRASAALVEAGGPVEINDISALARASTGAPAGTPFVAGPFLNVYNEAAARELMRRGCVRLCANIELSLGAVAAIARGC
PGLEVELFAYGRLPLALSGRCYHARLHGLHKDACQFVCERDPDGLAVATVEATPFLAMNGVQTLSHGVHVVDVEPARLRE
AGVGALRLSPHTGDMAAVSAAFRRFADGRSSPPELRAALAAAGPPGPLVNGYVHGARGLELLDA

Sequences:

>Translated_304_residues
MSGRLEITVGPLLFNWPAEAVRTFYRRVADDPAVDRVYLGEVVCGKRGPLLADALAESAEALEAGGKTVVWSTLALPANR
RELRASAALVEAGGPVEINDISALARASTGAPAGTPFVAGPFLNVYNEAAARELMRRGCVRLCANIELSLGAVAAIARGC
PGLEVELFAYGRLPLALSGRCYHARLHGLHKDACQFVCERDPDGLAVATVEATPFLAMNGVQTLSHGVHVVDVEPARLRE
AGVGALRLSPHTGDMAAVSAAFRRFADGRSSPPELRAALAAAGPPGPLVNGYVHGARGLELLDA
>Mature_303_residues
SGRLEITVGPLLFNWPAEAVRTFYRRVADDPAVDRVYLGEVVCGKRGPLLADALAESAEALEAGGKTVVWSTLALPANRR
ELRASAALVEAGGPVEINDISALARASTGAPAGTPFVAGPFLNVYNEAAARELMRRGCVRLCANIELSLGAVAAIARGCP
GLEVELFAYGRLPLALSGRCYHARLHGLHKDACQFVCERDPDGLAVATVEATPFLAMNGVQTLSHGVHVVDVEPARLREA
GVGALRLSPHTGDMAAVSAAFRRFADGRSSPPELRAALAAAGPPGPLVNGYVHGARGLELLDA

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=304, Percent_Identity=35.1973684210526, Blast_Score=153, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 31785; Mature: 31654

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRLEITVGPLLFNWPAEAVRTFYRRVADDPAVDRVYLGEVVCGKRGPLLADALAESAE
CCCEEEEEECCEEECCCHHHHHHHHHHHCCCCCCCCEEECCEEECCCCCHHHHHHHHHHH
ALEAGGKTVVWSTLALPANRRELRASAALVEAGGPVEINDISALARASTGAPAGTPFVAG
HHHCCCCEEEEEEEECCCCHHHHHHHHHHEECCCCEEEHHHHHHHHCCCCCCCCCCEECC
PFLNVYNEAAARELMRRGCVRLCANIELSLGAVAAIARGCPGLEVELFAYGRLPLALSGR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEECCC
CYHARLHGLHKDACQFVCERDPDGLAVATVEATPFLAMNGVQTLSHGVHVVDVEPARLRE
EEEHHHHCCCHHHHHHHHCCCCCCEEEEEEECCCEEECCCHHHHHCCEEEEECCHHHHHH
AGVGALRLSPHTGDMAAVSAAFRRFADGRSSPPELRAALAAAGPPGPLVNGYVHGARGLE
CCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCEE
LLDA
ECCC
>Mature Secondary Structure 
SGRLEITVGPLLFNWPAEAVRTFYRRVADDPAVDRVYLGEVVCGKRGPLLADALAESAE
CCEEEEEECCEEECCCHHHHHHHHHHHCCCCCCCCEEECCEEECCCCCHHHHHHHHHHH
ALEAGGKTVVWSTLALPANRRELRASAALVEAGGPVEINDISALARASTGAPAGTPFVAG
HHHCCCCEEEEEEEECCCCHHHHHHHHHHEECCCCEEEHHHHHHHHCCCCCCCCCCEECC
PFLNVYNEAAARELMRRGCVRLCANIELSLGAVAAIARGCPGLEVELFAYGRLPLALSGR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEECCC
CYHARLHGLHKDACQFVCERDPDGLAVATVEATPFLAMNGVQTLSHGVHVVDVEPARLRE
EEEHHHHCCCHHHHHHHHCCCCCCEEEEEEECCCEEECCCHHHHHCCEEEEECCHHHHHH
AGVGALRLSPHTGDMAAVSAAFRRFADGRSSPPELRAALAAAGPPGPLVNGYVHGARGLE
CCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCEE
LLDA
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]