Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197104144

Identifier: 197104144

GI number: 197104144

Start: 736299

End: 737438

Strand: Reverse

Name: 197104144

Synonym: PHZ_c0678

Alternate gene names: NA

Gene position: 737438-736299 (Counterclockwise)

Preceding gene: 197104145

Following gene: 197104140

Centisome position: 18.45

GC content: 78.16

Gene sequence:

>1140_bases
TTGATGACCACCACCCTGCATCCCTGCGACGTCGTGGTGATCGGCGGCGGCGTCGCGGGCGCGGCGATCGCCGCCTTCCT
GGCCCCCTGGCGGCGCGTGGTGGTGCTGGAGCGGGAGGCGCCGGCGGGGCGTCACGCCACCGGCCGCTCGTCCGGCATGC
TGCTGCCGTCCTACGGCGGCGAGGCCGCGCGGCCGCTGAGCCGGGCCAGCCTGCGGTTCTTCGCCGAGCCGCCCGGGATC
TTCGGCGGCGACCTCCTGACCCCGCGCCCCACCCTGCACGTGGCCGGCCCCTCGCAGATCGCCGCCCTCGCCGCCCTGGC
CGGCGAGCTGCCCGGCGCGCGCCTCTTCGGCCCCACCGAAGCGGCGCGCCGGGCGCCGCTGCTGCGGGCCGGGCGCCTGG
CCGGCGCCCTGCTGGAGGCCGAGGGCGGCGACATCGACGTCGCCCGGCTGCACGCCGGCTTCCTGGCGGCCTGCCGCCGG
TCGGGCGGGCAGGTCCACGTGGGCGTGGGGGACCTGACCTTCGCCCGCCGGGGCTCGGTCTGGCGGGTCTCCGCCGGCGG
TGTCACCTGGGCCGCGCCGGTGATCGTCAACGCCGCCGGCGCCTGGGCCGACGAGGTCGCCCGCGCCGCCGGCGCGGCGG
CGCTGGGCCTGCAGCCGAAGCGGCGGACGGTCCTGCTGTTTCCCAGACCGCCCGAGACCGCCGGCTGGCCGACGGTCAAG
GACGTGGACGAGCGGTTCTACTTCCGCCCCTGCTCGAAGGCCCTGCTCTTCACCGCCTGCGACGAGACGCCGAGCCCGCC
CTGCGACGCCCAGCCCGAGACGCTCGACGTGGCCCACGCGGCGGCGCTGTTCAGCCGCCTGTCGCGCCAGCCCGAGCCGC
GCCCGATCCGCGCCTGGGCCGGCCTGAGGACCTTCGCCCCCGACCGCGCGCCGGTCATCGGCTGGTCCTCGACGCCGGGC
TTCTTCTGGTTCGCCGGGCTCGGCGGCTTCGGCGTGCAGACGTCGCCGGCGGCCGGAAGCCTGGCCGCATCGCTGCTGCT
GGGCCGGCGAATCCCGGGCGACCTGTTGGACGCGGGCGTCCGGCCCGAGCTCTACGCACCGACCAGGCTGACGAGCACGG
GGGCCGCGCGGACCGCCTGA

Upstream 100 bases:

>100_bases
CGCCGCCCGAACTGCGGGCCGCGCTCGCCGCGGCAGGGCCGCCCGGTCCGCTCGTCAACGGCTACGTCCACGGCGCGCGC
GGCCTCGAGCTCCTGGACGC

Downstream 100 bases:

>100_bases
CGCGGGGCGGCGCCCGCGGGCCGCCACAGGCGCGAAACCTCCTCGGCCACGCCGCCGGCCGCGGCGTCCGGCGATCGCCA
GGCGAGGCCGAGGCTGGTCG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Glycine/D-Amino Acid Oxidase; Oxidoreductase; Amino Acid Oxidase; FAD-Dependent Oxidoreductase; Glycine Oxidase; FAD Dependent Oxidoreductase Family; Oxidase; FAD-Dependent Glycerol-3-Phosphate Dehydrogenase Protein; Fad Dependent Oxidoreductase

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MMTTTLHPCDVVVIGGGVAGAAIAAFLAPWRRVVVLEREAPAGRHATGRSSGMLLPSYGGEAARPLSRASLRFFAEPPGI
FGGDLLTPRPTLHVAGPSQIAALAALAGELPGARLFGPTEAARRAPLLRAGRLAGALLEAEGGDIDVARLHAGFLAACRR
SGGQVHVGVGDLTFARRGSVWRVSAGGVTWAAPVIVNAAGAWADEVARAAGAAALGLQPKRRTVLLFPRPPETAGWPTVK
DVDERFYFRPCSKALLFTACDETPSPPCDAQPETLDVAHAAALFSRLSRQPEPRPIRAWAGLRTFAPDRAPVIGWSSTPG
FFWFAGLGGFGVQTSPAAGSLAASLLLGRRIPGDLLDAGVRPELYAPTRLTSTGAARTA

Sequences:

>Translated_379_residues
MMTTTLHPCDVVVIGGGVAGAAIAAFLAPWRRVVVLEREAPAGRHATGRSSGMLLPSYGGEAARPLSRASLRFFAEPPGI
FGGDLLTPRPTLHVAGPSQIAALAALAGELPGARLFGPTEAARRAPLLRAGRLAGALLEAEGGDIDVARLHAGFLAACRR
SGGQVHVGVGDLTFARRGSVWRVSAGGVTWAAPVIVNAAGAWADEVARAAGAAALGLQPKRRTVLLFPRPPETAGWPTVK
DVDERFYFRPCSKALLFTACDETPSPPCDAQPETLDVAHAAALFSRLSRQPEPRPIRAWAGLRTFAPDRAPVIGWSSTPG
FFWFAGLGGFGVQTSPAAGSLAASLLLGRRIPGDLLDAGVRPELYAPTRLTSTGAARTA
>Mature_379_residues
MMTTTLHPCDVVVIGGGVAGAAIAAFLAPWRRVVVLEREAPAGRHATGRSSGMLLPSYGGEAARPLSRASLRFFAEPPGI
FGGDLLTPRPTLHVAGPSQIAALAALAGELPGARLFGPTEAARRAPLLRAGRLAGALLEAEGGDIDVARLHAGFLAACRR
SGGQVHVGVGDLTFARRGSVWRVSAGGVTWAAPVIVNAAGAWADEVARAAGAAALGLQPKRRTVLLFPRPPETAGWPTVK
DVDERFYFRPCSKALLFTACDETPSPPCDAQPETLDVAHAAALFSRLSRQPEPRPIRAWAGLRTFAPDRAPVIGWSSTPG
FFWFAGLGGFGVQTSPAAGSLAASLLLGRRIPGDLLDAGVRPELYAPTRLTSTGAARTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39416; Mature: 39416

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTTTLHPCDVVVIGGGVAGAAIAAFLAPWRRVVVLEREAPAGRHATGRSSGMLLPSYGG
CCCCCCCCCCEEEECCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEEEECCCC
EAARPLSRASLRFFAEPPGIFGGDLLTPRPTLHVAGPSQIAALAALAGELPGARLFGPTE
HHHCCHHHHHEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEECCHH
AARRAPLLRAGRLAGALLEAEGGDIDVARLHAGFLAACRRSGGQVHVGVGDLTFARRGSV
HHHHCCHHHHHHHHHEEEECCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCE
WRVSAGGVTWAAPVIVNAAGAWADEVARAAGAAALGLQPKRRTVLLFPRPPETAGWPTVK
EEEECCCCEEECHHEEECCCCCHHHHHHHHCCHHCCCCCCCCEEEEECCCCCCCCCCCHH
DVDERFYFRPCSKALLFTACDETPSPPCDAQPETLDVAHAAALFSRLSRQPEPRPIRAWA
HHHHHHEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHC
GLRTFAPDRAPVIGWSSTPGFFWFAGLGGFGVQTSPAAGSLAASLLLGRRIPGDLLDAGV
CCHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCC
RPELYAPTRLTSTGAARTA
CCCEECCCEECCCCCCCCC
>Mature Secondary Structure
MMTTTLHPCDVVVIGGGVAGAAIAAFLAPWRRVVVLEREAPAGRHATGRSSGMLLPSYGG
CCCCCCCCCCEEEECCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEEEECCCC
EAARPLSRASLRFFAEPPGIFGGDLLTPRPTLHVAGPSQIAALAALAGELPGARLFGPTE
HHHCCHHHHHEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEECCHH
AARRAPLLRAGRLAGALLEAEGGDIDVARLHAGFLAACRRSGGQVHVGVGDLTFARRGSV
HHHHCCHHHHHHHHHEEEECCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCE
WRVSAGGVTWAAPVIVNAAGAWADEVARAAGAAALGLQPKRRTVLLFPRPPETAGWPTVK
EEEECCCCEEECHHEEECCCCCHHHHHHHHCCHHCCCCCCCCEEEEECCCCCCCCCCCHH
DVDERFYFRPCSKALLFTACDETPSPPCDAQPETLDVAHAAALFSRLSRQPEPRPIRAWA
HHHHHHEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHC
GLRTFAPDRAPVIGWSSTPGFFWFAGLGGFGVQTSPAAGSLAASLLLGRRIPGDLLDAGV
CCHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCC
RPELYAPTRLTSTGAARTA
CCCEECCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA