| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104140
Identifier: 197104140
GI number: 197104140
Start: 732002
End: 733039
Strand: Reverse
Name: 197104140
Synonym: PHZ_c0674
Alternate gene names: NA
Gene position: 733039-732002 (Counterclockwise)
Preceding gene: 197104144
Following gene: 197104133
Centisome position: 18.34
GC content: 75.43
Gene sequence:
>1038_bases ATGACGCGATTCCACGTCGCCGCCTTGCTGGCGGCCGGCCTGACGCTCGCGCCCGCCGTCCTCCTCGCGGCGCCCGCCGC CCCGCCGGCCTCCGCCCACGCCCCCGCGCTGCAGGCGGTGCTGGACTACGCCCGCGCCCAGAAGACCACCGGCTTCCTGG TGATCCGCGACGGCGAGGTGCTGGCCCGCGCCAACTGGCCCCTGCCGGGTGAGGCCCAGCGGTTCCGCGCCCTGTTCGCC CATGGGACCACGCCGGCGGGCGAGCCGCTGGAGGACGTGGCCTCGCTGCAGAAGAGCGTCGTGGCCGTGCTCGCCGCCAT CGCCGTCGACCGGGGTCTGCTCGACGTGGATCGGCCCGTCTCGGACTACCTCGGTTCCGGCTGGTCGAAGGCGCCGCCGG AGAAGGAGGCGCAGATCCGCGTCGTCGACATCCTGACCATGAGCTCGGGCCTGACCGAGGGCTTCGCCTACGCCGCCGCG CCCGGGACGGTCTTCCTCTACAACACCCCCGTCTATGCGGCGGCCCAGCGGGTGCTGGAGGCCGCCGCCGGCCGACCCCT CGCCGAGATCACGCGCGACTGGCTGACGGAGCCCGCCGGCATGGCCGACACGGCCTGGCGGCCCCGTCCGGCCGGGTTCG GCGACGTCGGCAATCCGGTCGGCCTGGTCACTTCGCCCGGCGACCTCGCCCGGCTGGGCCAGCTCGTGCTGGACGGCGGA CGGGCGGCCAACGGGACGCAGGTGGTCTCCCGGGCCGGCCTGTCGGACCTCTTCCGCCGCTCTGCGGTCAATCCCGCCTA CGGACGCCTGTGGTGGCTGAACGGCGGCGCCTACGCGGTCCGGGCGGCGGGGGGCCGCGCCGAGGGTCCGCTGATCCCCA CCGCGCCGGCCGACCTGGTCGCGGCGTTCGGGGCGCTCGACCGCAAGCTCTATGTCTCGCCCTCGCGCCGGCTGGTGGTC GTCCGCCTCGGGCAGGATGCGCCCGATCCGGCCTTCGACACCACCCTCTGGCGCCTGCTCTCCGCCGCGCTGAACTGA
Upstream 100 bases:
>100_bases CAGTCGCGGTCAGGTCGGGGGAACGGTATTCATTCGCCGGAGAGTTAGGATTGTCACGCCCGCCGAACCGTTGCGGGCCG TACGGGGGGAGCCTGCGGAC
Downstream 100 bases:
>100_bases CGCCCGTCCCTCCAACAATCCCCCCTCCAAGAAGACAGGCGGCCGAAGCCGCCTGTGAAGTCTCGGGGAGGAACTAGAAG GCCTTGCGCACGCCGACCTC
Product: beta-lactamase
Products: NA
Alternate protein names: Beta-Lactamase Class C; Hydrolase Transmembrane Protein
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MTRFHVAALLAAGLTLAPAVLLAAPAAPPASAHAPALQAVLDYARAQKTTGFLVIRDGEVLARANWPLPGEAQRFRALFA HGTTPAGEPLEDVASLQKSVVAVLAAIAVDRGLLDVDRPVSDYLGSGWSKAPPEKEAQIRVVDILTMSSGLTEGFAYAAA PGTVFLYNTPVYAAAQRVLEAAAGRPLAEITRDWLTEPAGMADTAWRPRPAGFGDVGNPVGLVTSPGDLARLGQLVLDGG RAANGTQVVSRAGLSDLFRRSAVNPAYGRLWWLNGGAYAVRAAGGRAEGPLIPTAPADLVAAFGALDRKLYVSPSRRLVV VRLGQDAPDPAFDTTLWRLLSAALN
Sequences:
>Translated_345_residues MTRFHVAALLAAGLTLAPAVLLAAPAAPPASAHAPALQAVLDYARAQKTTGFLVIRDGEVLARANWPLPGEAQRFRALFA HGTTPAGEPLEDVASLQKSVVAVLAAIAVDRGLLDVDRPVSDYLGSGWSKAPPEKEAQIRVVDILTMSSGLTEGFAYAAA PGTVFLYNTPVYAAAQRVLEAAAGRPLAEITRDWLTEPAGMADTAWRPRPAGFGDVGNPVGLVTSPGDLARLGQLVLDGG RAANGTQVVSRAGLSDLFRRSAVNPAYGRLWWLNGGAYAVRAAGGRAEGPLIPTAPADLVAAFGALDRKLYVSPSRRLVV VRLGQDAPDPAFDTTLWRLLSAALN >Mature_344_residues TRFHVAALLAAGLTLAPAVLLAAPAAPPASAHAPALQAVLDYARAQKTTGFLVIRDGEVLARANWPLPGEAQRFRALFAH GTTPAGEPLEDVASLQKSVVAVLAAIAVDRGLLDVDRPVSDYLGSGWSKAPPEKEAQIRVVDILTMSSGLTEGFAYAAAP GTVFLYNTPVYAAAQRVLEAAAGRPLAEITRDWLTEPAGMADTAWRPRPAGFGDVGNPVGLVTSPGDLARLGQLVLDGGR AANGTQVVSRAGLSDLFRRSAVNPAYGRLWWLNGGAYAVRAAGGRAEGPLIPTAPADLVAAFGALDRKLYVSPSRRLVVV RLGQDAPDPAFDTTLWRLLSAALN
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36034; Mature: 35902
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFHVAALLAAGLTLAPAVLLAAPAAPPASAHAPALQAVLDYARAQKTTGFLVIRDGEV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCE LARANWPLPGEAQRFRALFAHGTTPAGEPLEDVASLQKSVVAVLAAIAVDRGLLDVDRPV EEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH SDYLGSGWSKAPPEKEAQIRVVDILTMSSGLTEGFAYAAAPGTVFLYNTPVYAAAQRVLE HHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHH AAAGRPLAEITRDWLTEPAGMADTAWRPRPAGFGDVGNPVGLVTSPGDLARLGQLVLDGG HHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCC RAANGTQVVSRAGLSDLFRRSAVNPAYGRLWWLNGGAYAVRAAGGRAEGPLIPTAPADLV CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCHHHHH AAFGALDRKLYVSPSRRLVVVRLGQDAPDPAFDTTLWRLLSAALN HHHHHHCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TRFHVAALLAAGLTLAPAVLLAAPAAPPASAHAPALQAVLDYARAQKTTGFLVIRDGEV CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCE LARANWPLPGEAQRFRALFAHGTTPAGEPLEDVASLQKSVVAVLAAIAVDRGLLDVDRPV EEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH SDYLGSGWSKAPPEKEAQIRVVDILTMSSGLTEGFAYAAAPGTVFLYNTPVYAAAQRVLE HHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHH AAAGRPLAEITRDWLTEPAGMADTAWRPRPAGFGDVGNPVGLVTSPGDLARLGQLVLDGG HHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCC RAANGTQVVSRAGLSDLFRRSAVNPAYGRLWWLNGGAYAVRAAGGRAEGPLIPTAPADLV CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCHHHHH AAFGALDRKLYVSPSRRLVVVRLGQDAPDPAFDTTLWRLLSAALN HHHHHHCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA