| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104097
Identifier: 197104097
GI number: 197104097
Start: 680681
End: 681568
Strand: Direct
Name: 197104097
Synonym: PHZ_c0631
Alternate gene names: NA
Gene position: 680681-681568 (Clockwise)
Preceding gene: 197104092
Following gene: 197104098
Centisome position: 17.03
GC content: 77.25
Gene sequence:
>888_bases ATGATACTGACCTGTCCAGAGTGCGCCACCAGCTATTTCGTGGACGAGGCGCGGGTGCCGCCGGAAGGCCGGACGGTGAA GTGCTCGTCGTGCGGCAAGCGCTGGCGCGCCTTCCGCGACATGGCCGAGGCCCACCCGGCGCCTGAACCGGCGCCCGCTT CCGACGTCGAGGATTACGAACCCGACCCGCCCGAGCAGATCGTGGCGGTGGGGCCCGACGGGCGCGAGGAGGAGATCGCC CCGCCCGCGGCCGGCGCGGCCGAGGCCCACGTTCAGGCCGCGGACGCGGCCGCCGAACCCGACGCGGAGGAGACCGTTCG CCGCCCCCGCCGCACGCCGCCCCGTCCGACGGCCAGGGCCGGGCGCGCGGGCGCGGGCGCCGCGCTCGCCTGGGCCGGCG TGGCCGCGACCGTGGCGGCGGTGACCGCCGTCGTGATGTTCCGGGCCGAGGTGGCCCGCGTCTGGCCGGCCAGCGCGGGG CTCTTCGCCGCGGTGGGGCTGCCCGCCGACCGCCTGGGCCTGGTGTTCGACGACGTGAAGTCCCAGGCCGCGCTGCAGGG CGGCCGGCCGGTGCTGTCGGTGACGGGGGCGATCCGCAACACCCGCTCTGAGACGGTGACCGCCCCCGCGCTGAAGGTCA GCCTGCTGGACCGGGCCGGCAAGCCGGTGGCCGCGCGCATCGCCCGGCCGCTCAACGCCGACATCCCGCCGGGCGCCAAG CGCTACTTCGCCATCGCCATCCCCGATCCGCCCGCGGGCTCGGCCACCCTGGACATCGCCTTCGAGGCGGAAGGCGCCGC GGCCGCCCCGTCCGCCGCCCAGCCGGTCGAGGCCGTCCTCGGACCCGAGCCCATAGAGGCGCAGCCGCTGCCGGCCGGCC ATGGCTGA
Upstream 100 bases:
>100_bases TCGGCGGCCTCCTGGACCGCGGCGGCGTTTGGTTTTCTGGACATGCGGGCCGAAATCGGCGACCTCGGAGTGAGGGTGCT GGAGCGTCCGATTCGGCGTC
Downstream 100 bases:
>100_bases CGCCGAGCCCGTCGTCCTGCTGTCCGAGGTGGAGATCGCCGAGCGGGTGAACGCCCTGGCGCATGCGATCGCGCCGCGCA TCGACGACGAGACGGTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MILTCPECATSYFVDEARVPPEGRTVKCSSCGKRWRAFRDMAEAHPAPEPAPASDVEDYEPDPPEQIVAVGPDGREEEIA PPAAGAAEAHVQAADAAAEPDAEETVRRPRRTPPRPTARAGRAGAGAALAWAGVAATVAAVTAVVMFRAEVARVWPASAG LFAAVGLPADRLGLVFDDVKSQAALQGGRPVLSVTGAIRNTRSETVTAPALKVSLLDRAGKPVAARIARPLNADIPPGAK RYFAIAIPDPPAGSATLDIAFEAEGAAAAPSAAQPVEAVLGPEPIEAQPLPAGHG
Sequences:
>Translated_295_residues MILTCPECATSYFVDEARVPPEGRTVKCSSCGKRWRAFRDMAEAHPAPEPAPASDVEDYEPDPPEQIVAVGPDGREEEIA PPAAGAAEAHVQAADAAAEPDAEETVRRPRRTPPRPTARAGRAGAGAALAWAGVAATVAAVTAVVMFRAEVARVWPASAG LFAAVGLPADRLGLVFDDVKSQAALQGGRPVLSVTGAIRNTRSETVTAPALKVSLLDRAGKPVAARIARPLNADIPPGAK RYFAIAIPDPPAGSATLDIAFEAEGAAAAPSAAQPVEAVLGPEPIEAQPLPAGHG >Mature_295_residues MILTCPECATSYFVDEARVPPEGRTVKCSSCGKRWRAFRDMAEAHPAPEPAPASDVEDYEPDPPEQIVAVGPDGREEEIA PPAAGAAEAHVQAADAAAEPDAEETVRRPRRTPPRPTARAGRAGAGAALAWAGVAATVAAVTAVVMFRAEVARVWPASAG LFAAVGLPADRLGLVFDDVKSQAALQGGRPVLSVTGAIRNTRSETVTAPALKVSLLDRAGKPVAARIARPLNADIPPGAK RYFAIAIPDPPAGSATLDIAFEAEGAAAAPSAAQPVEAVLGPEPIEAQPLPAGHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30235; Mature: 30235
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTCPECATSYFVDEARVPPEGRTVKCSSCGKRWRAFRDMAEAHPAPEPAPASDVEDYE CEEECCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PDPPEQIVAVGPDGREEEIAPPAAGAAEAHVQAADAAAEPDAEETVRRPRRTPPRPTARA CCCCHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC GRAGAGAALAWAGVAATVAAVTAVVMFRAEVARVWPASAGLFAAVGLPADRLGLVFDDVK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHH SQAALQGGRPVLSVTGAIRNTRSETVTAPALKVSLLDRAGKPVAARIARPLNADIPPGAK HHHHHCCCCCEEEEHHHHHCCCCCCEECHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC RYFAIAIPDPPAGSATLDIAFEAEGAAAAPSAAQPVEAVLGPEPIEAQPLPAGHG EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MILTCPECATSYFVDEARVPPEGRTVKCSSCGKRWRAFRDMAEAHPAPEPAPASDVEDYE CEEECCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PDPPEQIVAVGPDGREEEIAPPAAGAAEAHVQAADAAAEPDAEETVRRPRRTPPRPTARA CCCCHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC GRAGAGAALAWAGVAATVAAVTAVVMFRAEVARVWPASAGLFAAVGLPADRLGLVFDDVK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHH SQAALQGGRPVLSVTGAIRNTRSETVTAPALKVSLLDRAGKPVAARIARPLNADIPPGAK HHHHHCCCCCEEEEHHHHHCCCCCCEECHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC RYFAIAIPDPPAGSATLDIAFEAEGAAAAPSAAQPVEAVLGPEPIEAQPLPAGHG EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA