| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is dagK [H]
Identifier: 197104072
GI number: 197104072
Start: 649158
End: 650036
Strand: Reverse
Name: dagK [H]
Synonym: PHZ_c0606
Alternate gene names: 197104072
Gene position: 650036-649158 (Counterclockwise)
Preceding gene: 197104073
Following gene: 197104070
Centisome position: 16.27
GC content: 76.22
Gene sequence:
>879_bases ATGGCGCGGCGCGGCCTTCTCATCCGCAACCGATCCAAGCCGGACGACTGGGTCGCCGCGGTGCGCGCGCGGCTGGCCGA CGCCGGCATCGAGCTCGTCGACCGCCCCTGCGGCTCGGGCGAGGAGGCCTGCCGCATCATCGCCGCCGAGGGAAAGGCCG AGGGAGAGGGCGCCGACCTCGTCGGGGTGGCGGGCGGCGACGGCACGCTGAACGGCGCCGCCCCGGCCCTGCTGGAGCTC GGCAAGCCGCTGGGCGTCCTGCCGCTGGGCACCGCCAACGACCTGGCCCGCACCCTCGGCCTGCCCCTCGACCCGCTCGC CGCCGCCGAGGTCATCGCCGCCGGGCAGACGCGTAGGATCGACCTCGGGCTCGCCAACGGCCGGCCGTTCTTCAACGTCG CCAGCCTCGGCCTCGCCGCCGAGGTGGCCCAGACCCTGGAGGGCGCCGGCAAGCCCCTCGGTCGGCTCTCCTACGCCCTG GCGGCGCTGAAGGTGCTGCTCCGCGCCCGGCCGTTCCGGGCCGCCATCGCCGCCGGCGACCGGCTCGTCCGCACCCGCAG CTACCAGATCGCCGTCGGCAACGGCCGCTACCACGGCGGCGGCCTGGCCGTGCGCGAGGACGCCAGCATCGAGAGCGGCC GGCTCGTCCTCTACAGCCTCGAGCCGGGCAGCCTCTGGAAGGTGGTCCTGCTCGCGCCGCTGTTCCGCCGCGGCCGCCAC GTGCGCTGGCGGCAGGTGCGGACCGCCAGCGCGCGGACGATCGAGATCCGCACGCCCTCGCCGATGCCGGTCAACCTCGA CGGCGACCTCGCCACGGAGACCCCGCTCCGGCTGGAGGAGCTGCCGGGCGCGATCGAGGTGTTCGTCCCCGACGCCTAG
Upstream 100 bases:
>100_bases AACCGCGACTACTCCATGGCCCGCACGGCCTTCATCGACGCCATCCGCGCGGCGGCGACGACGGAGTGAGCCTTCCCGCG CCTTAGCCGTTGAGGCTCCC
Downstream 100 bases:
>100_bases GCCGCGACCGGCGCCGGCGCCTTCTCCCACTGCGACCATAGGCGCCTGGCCTCGGCCTTGGCGGGCCCGACGGAGGCGTC CTTCACATGGCCGAAGCCGC
Product: methylglyoxal synthase
Products: NA
Alternate protein names: DAG kinase; DAGK [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MARRGLLIRNRSKPDDWVAAVRARLADAGIELVDRPCGSGEEACRIIAAEGKAEGEGADLVGVAGGDGTLNGAAPALLEL GKPLGVLPLGTANDLARTLGLPLDPLAAAEVIAAGQTRRIDLGLANGRPFFNVASLGLAAEVAQTLEGAGKPLGRLSYAL AALKVLLRARPFRAAIAAGDRLVRTRSYQIAVGNGRYHGGGLAVREDASIESGRLVLYSLEPGSLWKVVLLAPLFRRGRH VRWRQVRTASARTIEIRTPSPMPVNLDGDLATETPLRLEELPGAIEVFVPDA
Sequences:
>Translated_292_residues MARRGLLIRNRSKPDDWVAAVRARLADAGIELVDRPCGSGEEACRIIAAEGKAEGEGADLVGVAGGDGTLNGAAPALLEL GKPLGVLPLGTANDLARTLGLPLDPLAAAEVIAAGQTRRIDLGLANGRPFFNVASLGLAAEVAQTLEGAGKPLGRLSYAL AALKVLLRARPFRAAIAAGDRLVRTRSYQIAVGNGRYHGGGLAVREDASIESGRLVLYSLEPGSLWKVVLLAPLFRRGRH VRWRQVRTASARTIEIRTPSPMPVNLDGDLATETPLRLEELPGAIEVFVPDA >Mature_291_residues ARRGLLIRNRSKPDDWVAAVRARLADAGIELVDRPCGSGEEACRIIAAEGKAEGEGADLVGVAGGDGTLNGAAPALLELG KPLGVLPLGTANDLARTLGLPLDPLAAAEVIAAGQTRRIDLGLANGRPFFNVASLGLAAEVAQTLEGAGKPLGRLSYALA ALKVLLRARPFRAAIAAGDRLVRTRSYQIAVGNGRYHGGGLAVREDASIESGRLVLYSLEPGSLWKVVLLAPLFRRGRHV RWRQVRTASARTIEIRTPSPMPVNLDGDLATETPLRLEELPGAIEVFVPDA
Specific function: Catalyzes the phosphorylation of diacylglycerol (DAG) into phosphatidic acid. Is involved in the biosynthesis of phosphatidylinositol mannosides (PIMs), probably via a role in the biosynthesis of phosphatidylinositol (PI), a PIM precursor, which is derive
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Secreted, cell wall (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=240, Percent_Identity=28.75, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005218 - InterPro: IPR001206 [H]
Pfam domain/function: PF00781 DAGK_cat [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 30715; Mature: 30584
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRGLLIRNRSKPDDWVAAVRARLADAGIELVDRPCGSGEEACRIIAAEGKAEGEGADL CCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCHHHEEEEEECCCCCCCCCCE VGVAGGDGTLNGAAPALLELGKPLGVLPLGTANDLARTLGLPLDPLAAAEVIAAGQTRRI EEEECCCCCCCCCCHHHHHCCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCEEE DLGLANGRPFFNVASLGLAAEVAQTLEGAGKPLGRLSYALAALKVLLRARPFRAAIAAGD EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCC RLVRTRSYQIAVGNGRYHGGGLAVREDASIESGRLVLYSLEPGSLWKVVLLAPLFRRGRH CEEEEEEEEEEECCCEEECCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCC VRWRQVRTASARTIEIRTPSPMPVNLDGDLATETPLRLEELPGAIEVFVPDA CEEHHEECCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHCCCEEEEEECCC >Mature Secondary Structure ARRGLLIRNRSKPDDWVAAVRARLADAGIELVDRPCGSGEEACRIIAAEGKAEGEGADL CCCCCEEECCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCHHHEEEEEECCCCCCCCCCE VGVAGGDGTLNGAAPALLELGKPLGVLPLGTANDLARTLGLPLDPLAAAEVIAAGQTRRI EEEECCCCCCCCCCHHHHHCCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCEEE DLGLANGRPFFNVASLGLAAEVAQTLEGAGKPLGRLSYALAALKVLLRARPFRAAIAAGD EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCC RLVRTRSYQIAVGNGRYHGGGLAVREDASIESGRLVLYSLEPGSLWKVVLLAPLFRRGRH CEEEEEEEEEEECCCEEECCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCC VRWRQVRTASARTIEIRTPSPMPVNLDGDLATETPLRLEELPGAIEVFVPDA CEEHHEECCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]