| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ccrM [H]
Identifier: 197104043
GI number: 197104043
Start: 611885
End: 612964
Strand: Direct
Name: ccrM [H]
Synonym: PHZ_c0577
Alternate gene names: 197104043
Gene position: 611885-612964 (Clockwise)
Preceding gene: 197104042
Following gene: 197104045
Centisome position: 15.31
GC content: 69.26
Gene sequence:
>1080_bases ATGGGCCTGCCGGTCGACACGATCATCGAGGGCGATTGCCTGGAGGCGCTGAAGAAGCTTCCGGACCGCTCGGTCGACCT CGTCTTCGCAGACCCGCCCTACAACCTGCAGCTCGGCGGCGACCTCCTGCGGCCCGACAATTCCAAGGTCGACGCCGTCG ACGATCACTGGGACCAGTTCGAGAGCTTCGAGGCCTATGACGCCTTCACCCGCGCCTGGCTGAAGGAATGCCGGCGGGTC CTGAAGGACGACGGCGCGATCTGGGTGATCGGCAGCTACCACAACATCTTCCGCGTCGGCGTCGCGGTGCAGGACCTGGG CTTCTGGATCCTGAACGACATCGTCTGGCGCAAGTCGAACCCGATGCCGAACTTCAAGGGCACGCGGTTCACCAACGCCC ACGAGACCCTGATCTGGGCCTCCAAATCGCGGGGCGGCCGGCGCTACACCTTCAACTACGACGCCATGAAGATGGCCAAC GACGAGCTGCAGATGCGCTCGGACTGGACGCTGCCGCTGTGCACCGGCGACGAGCGCCTGAAGGACGGCTCCGGCGCCAA GGCCCACCCGACCCAGAAGCCCGAGGCCCTGCTGCACCGGGTGATCCTGGCCTCGACCAAGCCCGGCGACGTGATCCTCG ATCCCTTCTTCGGCACCGGCACCACGGGCGCGGTGGCCAGGCGCCTGGGCCGCAAGTTCGTGGGCATCGAGCGCGAGGCC GAGTACGCCGCCCTCGCCCGCAAGCGCATCGCCCAGGTGACGCCGGCCACGGCGGACGAGATGGCGGTGACCGGCTCCAA GCGCGCCGAGCCGCGCGTGCCCTTCGGCACCATCCTCGAGGCCGGGCTGCTGCGGCCGGGCGACGTCCTCTACTGTCCGA AGGGGCGCAACGCCGCCCGCGTGCGGGCGGACGGCAGCCTGGTGGTGGGCGAGGTGTCCGGCTCGATCCACAAGGTGGGC GCGCTCGTGCAGTCGGCGCCGGCCTGCAACGGCTGGACCTACTGGCACTTCAAGTCGGACAAGGGCCTCGCCCCCATCGA TGTGCTGCGCGCCAAGGTCCGCTCGCAGCTCCCCGCCTAG
Upstream 100 bases:
>100_bases GCCGTTCGGCGAGGCTTAACTTCTCGTTGACCATCCGCGTCAACGGCCTCTTCACCATAAGCCCCGAGGATTCAGACTCT GGTTCTCTTGGGGTTTGAGC
Downstream 100 bases:
>100_bases AGCAGGTTCGAGAGCCCCGCGCGGGCCGCCTTCAGGAACACGCTGGGCAGCGCCTCCAGGTCGCCGCGCGGGCTCCAGAT CACGCCGTCGGCGTCGCCCT
Product: modification methylase
Products: NA
Alternate protein names: M.CcrMI; Adenine-specific methyltransferase CcrMI [H]
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MGLPVDTIIEGDCLEALKKLPDRSVDLVFADPPYNLQLGGDLLRPDNSKVDAVDDHWDQFESFEAYDAFTRAWLKECRRV LKDDGAIWVIGSYHNIFRVGVAVQDLGFWILNDIVWRKSNPMPNFKGTRFTNAHETLIWASKSRGGRRYTFNYDAMKMAN DELQMRSDWTLPLCTGDERLKDGSGAKAHPTQKPEALLHRVILASTKPGDVILDPFFGTGTTGAVARRLGRKFVGIEREA EYAALARKRIAQVTPATADEMAVTGSKRAEPRVPFGTILEAGLLRPGDVLYCPKGRNAARVRADGSLVVGEVSGSIHKVG ALVQSAPACNGWTYWHFKSDKGLAPIDVLRAKVRSQLPA
Sequences:
>Translated_359_residues MGLPVDTIIEGDCLEALKKLPDRSVDLVFADPPYNLQLGGDLLRPDNSKVDAVDDHWDQFESFEAYDAFTRAWLKECRRV LKDDGAIWVIGSYHNIFRVGVAVQDLGFWILNDIVWRKSNPMPNFKGTRFTNAHETLIWASKSRGGRRYTFNYDAMKMAN DELQMRSDWTLPLCTGDERLKDGSGAKAHPTQKPEALLHRVILASTKPGDVILDPFFGTGTTGAVARRLGRKFVGIEREA EYAALARKRIAQVTPATADEMAVTGSKRAEPRVPFGTILEAGLLRPGDVLYCPKGRNAARVRADGSLVVGEVSGSIHKVG ALVQSAPACNGWTYWHFKSDKGLAPIDVLRAKVRSQLPA >Mature_358_residues GLPVDTIIEGDCLEALKKLPDRSVDLVFADPPYNLQLGGDLLRPDNSKVDAVDDHWDQFESFEAYDAFTRAWLKECRRVL KDDGAIWVIGSYHNIFRVGVAVQDLGFWILNDIVWRKSNPMPNFKGTRFTNAHETLIWASKSRGGRRYTFNYDAMKMAND ELQMRSDWTLPLCTGDERLKDGSGAKAHPTQKPEALLHRVILASTKPGDVILDPFFGTGTTGAVARRLGRKFVGIEREAE YAALARKRIAQVTPATADEMAVTGSKRAEPRVPFGTILEAGLLRPGDVLYCPKGRNAARVRADGSLVVGEVSGSIHKVGA LVQSAPACNGWTYWHFKSDKGLAPIDVLRAKVRSQLPA
Specific function: This methylase recognizes the double-stranded sequence GANTC and causes specific methylation on A-2 on both strands. Ccrm-mediated methylation has important cellular functions. Appears to contribute to the accurate cell-cycle control of DNA replication an
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=293, Percent_Identity=33.7883959044369, Blast_Score=137, Evalue=8e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR002052 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 39706; Mature: 39575
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPVDTIIEGDCLEALKKLPDRSVDLVFADPPYNLQLGGDLLRPDNSKVDAVDDHWDQF CCCCHHHEECCHHHHHHHHCCCCCEEEEECCCCCCEEECCCEECCCCCCCCCCHHHHHHH ESFEAYDAFTRAWLKECRRVLKDDGAIWVIGSYHNIFRVGVAVQDLGFWILNDIVWRKSN HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC PMPNFKGTRFTNAHETLIWASKSRGGRRYTFNYDAMKMANDELQMRSDWTLPLCTGDERL CCCCCCCCEECCCCEEEEEEECCCCCEEEEEECHHHHHCCCHHHHCCCCCEEEECCHHHH KDGSGAKAHPTQKPEALLHRVILASTKPGDVILDPFFGTGTTGAVARRLGRKFVGIEREA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCHH EYAALARKRIAQVTPATADEMAVTGSKRAEPRVPFGTILEAGLLRPGDVLYCPKGRNAAR HHHHHHHHHHHHCCCCCCHHEEECCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCEE VRADGSLVVGEVSGSIHKVGALVQSAPACNGWTYWHFKSDKGLAPIDVLRAKVRSQLPA EECCCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure GLPVDTIIEGDCLEALKKLPDRSVDLVFADPPYNLQLGGDLLRPDNSKVDAVDDHWDQF CCCHHHEECCHHHHHHHHCCCCCEEEEECCCCCCEEECCCEECCCCCCCCCCHHHHHHH ESFEAYDAFTRAWLKECRRVLKDDGAIWVIGSYHNIFRVGVAVQDLGFWILNDIVWRKSN HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC PMPNFKGTRFTNAHETLIWASKSRGGRRYTFNYDAMKMANDELQMRSDWTLPLCTGDERL CCCCCCCCEECCCCEEEEEEECCCCCEEEEEECHHHHHCCCHHHHCCCCCEEEECCHHHH KDGSGAKAHPTQKPEALLHRVILASTKPGDVILDPFFGTGTTGAVARRLGRKFVGIEREA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCHH EYAALARKRIAQVTPATADEMAVTGSKRAEPRVPFGTILEAGLLRPGDVLYCPKGRNAAR HHHHHHHHHHHHCCCCCCHHEEECCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCEE VRADGSLVVGEVSGSIHKVGALVQSAPACNGWTYWHFKSDKGLAPIDVLRAKVRSQLPA EECCCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8289276 [H]