| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is coxG [H]
Identifier: 197104011
GI number: 197104011
Start: 577225
End: 577833
Strand: Direct
Name: coxG [H]
Synonym: PHZ_c0545
Alternate gene names: 197104011
Gene position: 577225-577833 (Clockwise)
Preceding gene: 197104010
Following gene: 197104012
Centisome position: 14.44
GC content: 67.16
Gene sequence:
>609_bases ATGTCCTCGAACGTCCCCTCTGATCCGGCAAAGGCCCGCAACAAGAAGGTCGCCCTCATCTGCGCGGCCGCGTTCGCCGG GATGATCGGCCTGGCCTACGCCTCGGTGCCGCTCTACCGCGCCTTCTGCGAACTCACCGGCTTCGACGGCACGCCGCGGC GGGTCGAGGCCGCCTCGGACGTGGTGCTCGACAAGACCCTGACGGTGCGCTTCGACGCCAACGTCCGCGACCTGCCGTGG GACTTCGACGCCAAGCAGACCTCCCAGCAGGTCAAGATCGGCGAGACCAAGGTCGCGTTCTTCAAGGTCACCAACACCTC GGACCAGCCGATCACCGGCCGGGCGGTGTTCAACGTCGTGCCCGAGCAGGCGGGGCTCTACTTCCAGAAGCTCGACTGCT TCTGCTTCGAGGACCAGACGGTCGGCCCGGGCGAGACCGTGGACATGCCGGTGCTCTACTTCATCGATCCGAAGTACGCC TCGGACTTCGAGACCAAGGGAAAGTCGGAGGTGACGCTGTCGTACACCTTCTTCCGCTCCACCAGCGCGCCCGAGCCCGC CCAGGCGGGCCTGCATCCCCCCAAGACCCCCGCGCCCGCCAAGGGGTGA
Upstream 100 bases:
>100_bases GAAGCCAAGGCGCGGCGCGGCCGCAACATCGCCCTGGCCGTCGGCCTCGTGCTGTTCGTGATCCTCGTCTTCGTCGTCAC GCTCGTGAGGCTCGGTGGAA
Downstream 100 bases:
>100_bases CGGGCCGGCCGGTTTCGTGCTGACCTGGGCCGAACGTGAGCCGAGGGAAGCCGTCATGCGCCTGGCCGTCCTGACCATCG CCGCCCTGGCCCTGTCGGCG
Product: cytochrome C oxidase assembly protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSSNVPSDPAKARNKKVALICAAAFAGMIGLAYASVPLYRAFCELTGFDGTPRRVEAASDVVLDKTLTVRFDANVRDLPW DFDAKQTSQQVKIGETKVAFFKVTNTSDQPITGRAVFNVVPEQAGLYFQKLDCFCFEDQTVGPGETVDMPVLYFIDPKYA SDFETKGKSEVTLSYTFFRSTSAPEPAQAGLHPPKTPAPAKG
Sequences:
>Translated_202_residues MSSNVPSDPAKARNKKVALICAAAFAGMIGLAYASVPLYRAFCELTGFDGTPRRVEAASDVVLDKTLTVRFDANVRDLPW DFDAKQTSQQVKIGETKVAFFKVTNTSDQPITGRAVFNVVPEQAGLYFQKLDCFCFEDQTVGPGETVDMPVLYFIDPKYA SDFETKGKSEVTLSYTFFRSTSAPEPAQAGLHPPKTPAPAKG >Mature_201_residues SSNVPSDPAKARNKKVALICAAAFAGMIGLAYASVPLYRAFCELTGFDGTPRRVEAASDVVLDKTLTVRFDANVRDLPWD FDAKQTSQQVKIGETKVAFFKVTNTSDQPITGRAVFNVVPEQAGLYFQKLDCFCFEDQTVGPGETVDMPVLYFIDPKYAS DFETKGKSEVTLSYTFFRSTSAPEPAQAGLHPPKTPAPAKG
Specific function: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I [H]
COG id: COG3175
COG function: function code O; Cytochrome oxidase assembly factor
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the COX11/CtaG family [H]
Homologues:
Organism=Homo sapiens, GI4758034, Length=176, Percent_Identity=40.9090909090909, Blast_Score=149, Evalue=1e-36, Organism=Homo sapiens, GI242247057, Length=136, Percent_Identity=35.2941176470588, Blast_Score=95, Evalue=3e-20, Organism=Homo sapiens, GI242247061, Length=128, Percent_Identity=36.71875, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71990692, Length=182, Percent_Identity=37.9120879120879, Blast_Score=133, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6325125, Length=177, Percent_Identity=41.2429378531073, Blast_Score=142, Evalue=5e-35, Organism=Drosophila melanogaster, GI24581944, Length=186, Percent_Identity=38.7096774193548, Blast_Score=143, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007533 [H]
Pfam domain/function: PF04442 CtaG_Cox11 [H]
EC number: NA
Molecular weight: Translated: 21991; Mature: 21860
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNVPSDPAKARNKKVALICAAAFAGMIGLAYASVPLYRAFCELTGFDGTPRRVEAASD CCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC VVLDKTLTVRFDANVRDLPWDFDAKQTSQQVKIGETKVAFFKVTNTSDQPITGRAVFNVV EEECCEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCEECCEEEEEC PEQAGLYFQKLDCFCFEDQTVGPGETVDMPVLYFIDPKYASDFETKGKSEVTLSYTFFRS CCHHCEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEEC TSAPEPAQAGLHPPKTPAPAKG CCCCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure SSNVPSDPAKARNKKVALICAAAFAGMIGLAYASVPLYRAFCELTGFDGTPRRVEAASD CCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC VVLDKTLTVRFDANVRDLPWDFDAKQTSQQVKIGETKVAFFKVTNTSDQPITGRAVFNVV EEECCEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCEECCEEEEEC PEQAGLYFQKLDCFCFEDQTVGPGETVDMPVLYFIDPKYASDFETKGKSEVTLSYTFFRS CCHHCEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEEC TSAPEPAQAGLHPPKTPAPAKG CCCCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]