| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103964
Identifier: 197103964
GI number: 197103964
Start: 522712
End: 523665
Strand: Direct
Name: 197103964
Synonym: PHZ_c0498
Alternate gene names: NA
Gene position: 522712-523665 (Clockwise)
Preceding gene: 197103963
Following gene: 197103968
Centisome position: 13.08
GC content: 76.0
Gene sequence:
>954_bases ATGACCACGGTCGTCCTCACCGGCGCGAGCTCGTTCACGGGCCTCTGGATCGCCCAGGCGCTGGCGGACGAGGGCTTTTT GGTGGTGGCGCCGCTGCGCCGCGCGGCCGGCGACTACGCGGGCCTGCGCGCCAGGCGGGTGGAGCGCCTCGCCGCCTGCG CCGAGCGGGTGTTCGAGGCGCCGGTGGAGTCGGACGCCTTCCGGGCCCTCCTGGCGCAGGCGCGGCCCACGATCCTCGCC CACCACGCCGCGGACATACCCGGCTACCGCAGCCCGGACTACGATCCGCAGGCGGGCTTCGCGCGCAACATGGCCGGCGT GCCGGAGGCCATCGCCGCCTTCGCCGCGGCCGGCGGCCGCGCCCTGCTGGCGACCGGCACCTATTTCGAGACGGGCGAGG GCGGCGGCGAGGCGGCGGCCAGCCCCTATGGCCTCTCCAAGGCCCTGACCAACGCGGCCCAGCGCGAGCTGGCGCACGCC GCCGGGCTGGCGTTCGGCAAGTTCGTGATCCCCTCGCCGTTCGGCCCGCACGAGGAGGGGCGGATCGTCTGGTCCCTGTT CCAGGCCTGGACCGAGGGCCGGGCGGCCGAGATCCGGACCCCCGCCTACGTCCGTGACCACCTGCCGGTCCCGCTGCTGG CCCGGGCCTATGCCGCGGCCGTGCGGGCGATGCTTGAGGCGGCGCCGGGCGCGGACCTGGCGTTCCGCCCCTCTGGATTC GTGGAGCCGGTCGGCGCCTTCGCCCGGCGCGTGGCCGCCGAGGTGCGCGCCCGCACCGGCATGGCCTGCGAGGTCGTCGA GCACCCCCAGACCGAGTTTCCCGAGCCGCGCACGCGGGCCAACAGCGAGCCCGCACCCTTCGCGGCGGGGGAGGAGGCGG CGTTCTGGGACGCTTGCGTGGCCTATTACGACGAGATCCGCGCCGCGGGCCTGCTGCACGCCACGGCCGCTTAG
Upstream 100 bases:
>100_bases AGGCGGGCGTCCGCTGGGACGATCCGGCGTTCGGCATCGACTGGCCCGCCGTCCCGGCGCTGATCTCGGACCGCGACCGG ACCTACCCCGACTACCGGGC
Downstream 100 bases:
>100_bases ACGGTGCGTTCTAGGCCCGCGCCTGGGCGACCGCCTTGGCTACCGCCTCGAAGAAGTCCGTCGCCCACGGCTTCGTCCGG CCCAGCGGGCTGGCCTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NAD Dependent Epimerase/Dehydratase Family
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTTVVLTGASSFTGLWIAQALADEGFLVVAPLRRAAGDYAGLRARRVERLAACAERVFEAPVESDAFRALLAQARPTILA HHAADIPGYRSPDYDPQAGFARNMAGVPEAIAAFAAAGGRALLATGTYFETGEGGGEAAASPYGLSKALTNAAQRELAHA AGLAFGKFVIPSPFGPHEEGRIVWSLFQAWTEGRAAEIRTPAYVRDHLPVPLLARAYAAAVRAMLEAAPGADLAFRPSGF VEPVGAFARRVAAEVRARTGMACEVVEHPQTEFPEPRTRANSEPAPFAAGEEAAFWDACVAYYDEIRAAGLLHATAA
Sequences:
>Translated_317_residues MTTVVLTGASSFTGLWIAQALADEGFLVVAPLRRAAGDYAGLRARRVERLAACAERVFEAPVESDAFRALLAQARPTILA HHAADIPGYRSPDYDPQAGFARNMAGVPEAIAAFAAAGGRALLATGTYFETGEGGGEAAASPYGLSKALTNAAQRELAHA AGLAFGKFVIPSPFGPHEEGRIVWSLFQAWTEGRAAEIRTPAYVRDHLPVPLLARAYAAAVRAMLEAAPGADLAFRPSGF VEPVGAFARRVAAEVRARTGMACEVVEHPQTEFPEPRTRANSEPAPFAAGEEAAFWDACVAYYDEIRAAGLLHATAA >Mature_316_residues TTVVLTGASSFTGLWIAQALADEGFLVVAPLRRAAGDYAGLRARRVERLAACAERVFEAPVESDAFRALLAQARPTILAH HAADIPGYRSPDYDPQAGFARNMAGVPEAIAAFAAAGGRALLATGTYFETGEGGGEAAASPYGLSKALTNAAQRELAHAA GLAFGKFVIPSPFGPHEEGRIVWSLFQAWTEGRAAEIRTPAYVRDHLPVPLLARAYAAAVRAMLEAAPGADLAFRPSGFV EPVGAFARRVAAEVRARTGMACEVVEHPQTEFPEPRTRANSEPAPFAAGEEAAFWDACVAYYDEIRAAGLLHATAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33419; Mature: 33288
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVVLTGASSFTGLWIAQALADEGFLVVAPLRRAAGDYAGLRARRVERLAACAERVFEA CCEEEEECCCCHHHHHHHHHHHCCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHC PVESDAFRALLAQARPTILAHHAADIPGYRSPDYDPQAGFARNMAGVPEAIAAFAAAGGR CCCHHHHHHHHHHCCCHHEEHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCC ALLATGTYFETGEGGGEAAASPYGLSKALTNAAQRELAHAAGLAFGKFVIPSPFGPHEEG EEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCC RIVWSLFQAWTEGRAAEIRTPAYVRDHLPVPLLARAYAAAVRAMLEAAPGADLAFRPSGF HHHHHHHHHHHCCCCEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC VEPVGAFARRVAAEVRARTGMACEVVEHPQTEFPEPRTRANSEPAPFAAGEEAAFWDACV CCHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHH AYYDEIRAAGLLHATAA HHHHHHHHHHHHHHCCC >Mature Secondary Structure TTVVLTGASSFTGLWIAQALADEGFLVVAPLRRAAGDYAGLRARRVERLAACAERVFEA CEEEEECCCCHHHHHHHHHHHCCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHC PVESDAFRALLAQARPTILAHHAADIPGYRSPDYDPQAGFARNMAGVPEAIAAFAAAGGR CCCHHHHHHHHHHCCCHHEEHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCC ALLATGTYFETGEGGGEAAASPYGLSKALTNAAQRELAHAAGLAFGKFVIPSPFGPHEEG EEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCC RIVWSLFQAWTEGRAAEIRTPAYVRDHLPVPLLARAYAAAVRAMLEAAPGADLAFRPSGF HHHHHHHHHHHCCCCEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC VEPVGAFARRVAAEVRARTGMACEVVEHPQTEFPEPRTRANSEPAPFAAGEEAAFWDACV CCHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHH AYYDEIRAAGLLHATAA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA