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The map label for this gene is yfnF [H]

Identifier: 197103951

GI number: 197103951

Start: 507281

End: 508306

Strand: Direct

Name: yfnF [H]

Synonym: PHZ_c0485

Alternate gene names: 197103951

Gene position: 507281-508306 (Clockwise)

Preceding gene: 197103950

Following gene: 197103952

Centisome position: 12.69

GC content: 67.84

Gene sequence:

>1026_bases
ATGAAAGTGCTCGTCTATTCCAGCTTCACGTTCTCGTACCTGAACCGGGCGCGGGTGCTCTACCAGACCCTGCGGCGGTT
CCATCCCGACTGGGAGCTGGTGGCCCTGATCACCGACCGGCCGCCCGAGGGTTTCGCCTTCGATCCCGCCGCCGAGCCGT
TCGACCGGGTGGTCTGGGCCGAGGATCTGGGCATCCCCGATTTCCAGGGCTGGCTCTTCAAGCACGACGTGGTCGAGGTC
TGCACGGCGGTGAAGGGTCCCTTCATCCACCAGGCCTGCAGCTCGGGCGCCGACGCGGTCATCTACCTCGATCCCGACAC
CGCCCTGCTGGGCTCGCTGGACCCGCTGGTGGAGTGGCTCCAGGACCACGACATCCTGCTGACGCCGCACCTGATCGATC
CGAACGACGACCTCACCGCGATCCTCGACAACGACCTGTCGGCCTCGCGCACGGGCATCTTCAACCTGGGCTTCGTGGCG
ATCCGGACGACCGGCGAAGGCGCGCGCTTCGCCAAGTGGTGGAACGACCGGCTGCTGTCGTTCTGCTACGACGACATGCC
CAACGGCCTGTTCGTGGACCAGCGCTGGTGCGACCACGTCCCGGCCCTGTTCGACAAGGTGAAGGTGATCCGCGATCCCG
GCTACAACGTCGCCAGCTGGAACCTCAGCACGCGGACCGTGGCGGTGGAGAAGGACGGCCGGATCACCGTCAACGGCGCG
CCGCTGCGCTTCTGGCACTTCACCAAGCTGGGGCCGCTGGGCGACACCATGACCAAGCGCTACGCGGGGCGGAACTTCCC
CGTCTACGAGATCTGGGCGTGGTACAAGCGGCTGGTGGCCGAGGCGACCGACGCGGCGATCCCCGAGCGCTGGTGGGCCT
ACGGCGCCTATGACGATGGCGCGCCGATCGAGAAGGCCGAGCGGGTCCTGTACCGCCAGCGGGGCGACCTGCAGGCCGCC
TATCCGAACCCCTTCGCCGCCGGACCCGGCAGCTTCCGCGAATGGCTCCAGACGGAGGGCGCATGA

Upstream 100 bases:

>100_bases
GCGAGGTCCTGAAGCTGGGGCGGGCCACGCGGCGGCCGGCCCTCTACGACCTGGACTTCGGCGCGCTCACCGCCGACCTG
CTCCCCGAGGGGACCCCCGC

Downstream 100 bases:

>100_bases
GCCTGGCGCCCAACATGGCGCGGCGCCGGCGCCGGTCCGGCGCGGCGGCGGTCGAGGCGCAGCAGGCCGCGCCGCCGCCT
GCGGATGCGGACGTCTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKVLVYSSFTFSYLNRARVLYQTLRRFHPDWELVALITDRPPEGFAFDPAAEPFDRVVWAEDLGIPDFQGWLFKHDVVEV
CTAVKGPFIHQACSSGADAVIYLDPDTALLGSLDPLVEWLQDHDILLTPHLIDPNDDLTAILDNDLSASRTGIFNLGFVA
IRTTGEGARFAKWWNDRLLSFCYDDMPNGLFVDQRWCDHVPALFDKVKVIRDPGYNVASWNLSTRTVAVEKDGRITVNGA
PLRFWHFTKLGPLGDTMTKRYAGRNFPVYEIWAWYKRLVAEATDAAIPERWWAYGAYDDGAPIEKAERVLYRQRGDLQAA
YPNPFAAGPGSFREWLQTEGA

Sequences:

>Translated_341_residues
MKVLVYSSFTFSYLNRARVLYQTLRRFHPDWELVALITDRPPEGFAFDPAAEPFDRVVWAEDLGIPDFQGWLFKHDVVEV
CTAVKGPFIHQACSSGADAVIYLDPDTALLGSLDPLVEWLQDHDILLTPHLIDPNDDLTAILDNDLSASRTGIFNLGFVA
IRTTGEGARFAKWWNDRLLSFCYDDMPNGLFVDQRWCDHVPALFDKVKVIRDPGYNVASWNLSTRTVAVEKDGRITVNGA
PLRFWHFTKLGPLGDTMTKRYAGRNFPVYEIWAWYKRLVAEATDAAIPERWWAYGAYDDGAPIEKAERVLYRQRGDLQAA
YPNPFAAGPGSFREWLQTEGA
>Mature_341_residues
MKVLVYSSFTFSYLNRARVLYQTLRRFHPDWELVALITDRPPEGFAFDPAAEPFDRVVWAEDLGIPDFQGWLFKHDVVEV
CTAVKGPFIHQACSSGADAVIYLDPDTALLGSLDPLVEWLQDHDILLTPHLIDPNDDLTAILDNDLSASRTGIFNLGFVA
IRTTGEGARFAKWWNDRLLSFCYDDMPNGLFVDQRWCDHVPALFDKVKVIRDPGYNVASWNLSTRTVAVEKDGRITVNGA
PLRFWHFTKLGPLGDTMTKRYAGRNFPVYEIWAWYKRLVAEATDAAIPERWWAYGAYDDGAPIEKAERVLYRQRGDLQAA
YPNPFAAGPGSFREWLQTEGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005069 [H]

Pfam domain/function: PF03407 Nucleotid_trans [H]

EC number: NA

Molecular weight: Translated: 38742; Mature: 38742

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVYSSFTFSYLNRARVLYQTLRRFHPDWELVALITDRPPEGFAFDPAAEPFDRVVWA
CEEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHEEEH
EDLGIPDFQGWLFKHDVVEVCTAVKGPFIHQACSSGADAVIYLDPDTALLGSLDPLVEWL
HHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCHHHHCCHHHHHHHH
QDHDILLTPHLIDPNDDLTAILDNDLSASRTGIFNLGFVAIRTTGEGARFAKWWNDRLLS
HCCCEEEECEEECCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHH
FCYDDMPNGLFVDQRWCDHVPALFDKVKVIRDPGYNVASWNLSTRTVAVEKDGRITVNGA
HHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCEEEECCC
PLRFWHFTKLGPLGDTMTKRYAGRNFPVYEIWAWYKRLVAEATDAAIPERWWAYGAYDDG
CEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCC
APIEKAERVLYRQRGDLQAAYPNPFAAGPGSFREWLQTEGA
CCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKVLVYSSFTFSYLNRARVLYQTLRRFHPDWELVALITDRPPEGFAFDPAAEPFDRVVWA
CEEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHEEEH
EDLGIPDFQGWLFKHDVVEVCTAVKGPFIHQACSSGADAVIYLDPDTALLGSLDPLVEWL
HHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCHHHHCCHHHHHHHH
QDHDILLTPHLIDPNDDLTAILDNDLSASRTGIFNLGFVAIRTTGEGARFAKWWNDRLLS
HCCCEEEECEEECCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHH
FCYDDMPNGLFVDQRWCDHVPALFDKVKVIRDPGYNVASWNLSTRTVAVEKDGRITVNGA
HHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCEEEECCC
PLRFWHFTKLGPLGDTMTKRYAGRNFPVYEIWAWYKRLVAEATDAAIPERWWAYGAYDDG
CEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCC
APIEKAERVLYRQRGDLQAAYPNPFAAGPGSFREWLQTEGA
CCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]