| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103950
Identifier: 197103950
GI number: 197103950
Start: 505680
End: 507284
Strand: Direct
Name: 197103950
Synonym: PHZ_c0484
Alternate gene names: NA
Gene position: 505680-507284 (Clockwise)
Preceding gene: 197103946
Following gene: 197103951
Centisome position: 12.65
GC content: 74.02
Gene sequence:
>1605_bases GTGAGGTCCCTCGTTCCCGCCGCGCTGAAGCTGCGCCTGCTGTCCGGATTCAAGCGCTTCGACCCCGACCGGGCCGTCGT GGCGGCCGAGTTCGACGCCGCCTGGTACCTGCAGGCCTATCCCGACATCGCCAAGGCCCGGGTGGACCCCCTGGCTCACT TCATGGCCTTCGGCTGGAAGGAAGGGCGCGATCCGAACCCCCGGTTCTCGGTCCGCGAGTACCTGAACGAATATCCGGAG GTGGCGCGGACGGGCGTCAATCCGTTCGTGCATTTCCTGAAGTCGGGTGGGGAGGGCAGCCGCGCGCCGCGTCCGGACCT GGGCTTCCGCTATGACGTGATCGCGCGGCTGGTCCCCGTCGAGGACCGCCTCGCCCAGGCGGCGCGCGCCTCGGACGCGG TCCGGCCGGGGGCGGGGCTCGCCGGCGCCCTGGGCCAGATCGGCCGCCGACCGCTGCACGTCACCTTCAGCCACGACGAC TACACGGCCAATGTCGGCGGGGTGCAGCTCGCCTTGCAGCGCGAGGCCGCGGGCGTGGCGGCGCAGGGCCGCGACCACCT GCACCTGCACCCGGCGACGCCCTGGCCGATGCTCCGGACGGACGAGCCCGCCGCGCTGGGCGTGGTCTGGAACGGCCAGG CGCTGGGCGCCTTCGCCGCCGAAGCGGTCGCCGAAGCCCTGCGCGCGGCGGCTCCCGCCCGCCCCGGCGAGCGCAGCTTC GCCATTCACAGCCTGCTCGGTCATTCCGTCGACGAGGTCTTAGCGATCCTGGCGGCGGCGGGGCTGTCCGAAGGCTTCTT CTGGCTGCACGACTTCGCGAGCCTGTGCGCGGGCTACCACCTGCTGCGCAACGACGTGGAGGATTGCGCGGCCCCGCCGC CGGACAGCGCCGCCTGCGGCATCTGCTTGTACGGTCCCTGGCGCGGCCGGCACCTGTCCGAGCACGAGCGGCTGTTCCGG CGCCTGAAGCTCACCGTGGTCGCTCCCTCGCAACCGACGCTCGACCTGTGGCGGGCGTCCTGGGACTTCCCGGTCGCCGG AACCCTCGTCCATCCTCACGCCCGCCTTCGCTCCCGCGGGGCCGCGCCGGCTCCGCCCGCGGGGCGGCCGTTCCGCCTCG CCTACGCCGGCCTACCGGCGGCCCACAAGGGCTGGCCGGTGTTCCGCGACCTGGCGCTGAGGCTGGCCGACGACCCGCGC TACGAGTTCCTGCATCTGGGCCTGCGCAGCACGCCCGGACTGCCGGTCCGGTTCGTCGAGGTCGCGGCGGGCCCCGAGAA CCCGCGCGCCATGCAGCAGGCGCTGGAGGCCGCCGAGGCCGACGCGGTGCTGGTCTGGCCGCTCTGCCGCGAGACGTTCT CGTTCGTCGCCTACGAGGCCGTGGCCGCCGGCTGCGCCGTCATCACCGGGCCCGACAGCGGCAACGTCGCCGCCTTCGTC CGCGACGGAGGTCATGGCGCGGTGCTGGACGAGGCCGCCCTCGCCGAGGCTTTCGAGAGTGGCGAGGTCCTGAAGCTGGG GCGGGCCACGCGGCGGCCGGCCCTCTACGACCTGGACTTCGGCGCGCTCACCGCCGACCTGCTCCCCGAGGGGACCCCCG CATGA
Upstream 100 bases:
>100_bases AGTCGGGTTCGATCCGCACGCTCGCCCGCCGCCGGCGCGAGGCGCGGCTGTACGATCTCAGCTTCAGCGGCATGACCGCC GACCTTGTGGAGGCCATGGC
Downstream 100 bases:
>100_bases AAGTGCTCGTCTATTCCAGCTTCACGTTCTCGTACCTGAACCGGGCGCGGGTGCTCTACCAGACCCTGCGGCGGTTCCAT CCCGACTGGGAGCTGGTGGC
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MRSLVPAALKLRLLSGFKRFDPDRAVVAAEFDAAWYLQAYPDIAKARVDPLAHFMAFGWKEGRDPNPRFSVREYLNEYPE VARTGVNPFVHFLKSGGEGSRAPRPDLGFRYDVIARLVPVEDRLAQAARASDAVRPGAGLAGALGQIGRRPLHVTFSHDD YTANVGGVQLALQREAAGVAAQGRDHLHLHPATPWPMLRTDEPAALGVVWNGQALGAFAAEAVAEALRAAAPARPGERSF AIHSLLGHSVDEVLAILAAAGLSEGFFWLHDFASLCAGYHLLRNDVEDCAAPPPDSAACGICLYGPWRGRHLSEHERLFR RLKLTVVAPSQPTLDLWRASWDFPVAGTLVHPHARLRSRGAAPAPPAGRPFRLAYAGLPAAHKGWPVFRDLALRLADDPR YEFLHLGLRSTPGLPVRFVEVAAGPENPRAMQQALEAAEADAVLVWPLCRETFSFVAYEAVAAGCAVITGPDSGNVAAFV RDGGHGAVLDEAALAEAFESGEVLKLGRATRRPALYDLDFGALTADLLPEGTPA
Sequences:
>Translated_534_residues MRSLVPAALKLRLLSGFKRFDPDRAVVAAEFDAAWYLQAYPDIAKARVDPLAHFMAFGWKEGRDPNPRFSVREYLNEYPE VARTGVNPFVHFLKSGGEGSRAPRPDLGFRYDVIARLVPVEDRLAQAARASDAVRPGAGLAGALGQIGRRPLHVTFSHDD YTANVGGVQLALQREAAGVAAQGRDHLHLHPATPWPMLRTDEPAALGVVWNGQALGAFAAEAVAEALRAAAPARPGERSF AIHSLLGHSVDEVLAILAAAGLSEGFFWLHDFASLCAGYHLLRNDVEDCAAPPPDSAACGICLYGPWRGRHLSEHERLFR RLKLTVVAPSQPTLDLWRASWDFPVAGTLVHPHARLRSRGAAPAPPAGRPFRLAYAGLPAAHKGWPVFRDLALRLADDPR YEFLHLGLRSTPGLPVRFVEVAAGPENPRAMQQALEAAEADAVLVWPLCRETFSFVAYEAVAAGCAVITGPDSGNVAAFV RDGGHGAVLDEAALAEAFESGEVLKLGRATRRPALYDLDFGALTADLLPEGTPA >Mature_534_residues MRSLVPAALKLRLLSGFKRFDPDRAVVAAEFDAAWYLQAYPDIAKARVDPLAHFMAFGWKEGRDPNPRFSVREYLNEYPE VARTGVNPFVHFLKSGGEGSRAPRPDLGFRYDVIARLVPVEDRLAQAARASDAVRPGAGLAGALGQIGRRPLHVTFSHDD YTANVGGVQLALQREAAGVAAQGRDHLHLHPATPWPMLRTDEPAALGVVWNGQALGAFAAEAVAEALRAAAPARPGERSF AIHSLLGHSVDEVLAILAAAGLSEGFFWLHDFASLCAGYHLLRNDVEDCAAPPPDSAACGICLYGPWRGRHLSEHERLFR RLKLTVVAPSQPTLDLWRASWDFPVAGTLVHPHARLRSRGAAPAPPAGRPFRLAYAGLPAAHKGWPVFRDLALRLADDPR YEFLHLGLRSTPGLPVRFVEVAAGPENPRAMQQALEAAEADAVLVWPLCRETFSFVAYEAVAAGCAVITGPDSGNVAAFV RDGGHGAVLDEAALAEAFESGEVLKLGRATRRPALYDLDFGALTADLLPEGTPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57479; Mature: 57479
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLVPAALKLRLLSGFKRFDPDRAVVAAEFDAAWYLQAYPDIAKARVDPLAHFMAFGWK CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHCCHHHHHHHHHHHHHHHHCCC EGRDPNPRFSVREYLNEYPEVARTGVNPFVHFLKSGGEGSRAPRPDLGFRYDVIARLVPV CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCH EDRLAQAARASDAVRPGAGLAGALGQIGRRPLHVTFSHDDYTANVGGVQLALQREAAGVA HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEECCCCEEEEEEHHHCCCC AQGRDHLHLHPATPWPMLRTDEPAALGVVWNGQALGAFAAEAVAEALRAAAPARPGERSF CCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHH AIHSLLGHSVDEVLAILAAAGLSEGFFWLHDFASLCAGYHLLRNDVEDCAAPPPDSAACG HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCC ICLYGPWRGRHLSEHERLFRRLKLTVVAPSQPTLDLWRASWDFPVAGTLVHPHARLRSRG EEEECCCCCCCCHHHHHHHHHHEEEEECCCCCCHHHHHCCCCCCCCCEEECCHHHHHHCC AAPAPPAGRPFRLAYAGLPAAHKGWPVFRDLALRLADDPRYEFLHLGLRSTPGLPVRFVE CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEE VAAGPENPRAMQQALEAAEADAVLVWPLCRETFSFVAYEAVAAGCAVITGPDSGNVAAFV EECCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEE RDGGHGAVLDEAALAEAFESGEVLKLGRATRRPALYDLDFGALTADLLPEGTPA EECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCHHHHHHHHCCCCCCC >Mature Secondary Structure MRSLVPAALKLRLLSGFKRFDPDRAVVAAEFDAAWYLQAYPDIAKARVDPLAHFMAFGWK CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHCCHHHHHHHHHHHHHHHHCCC EGRDPNPRFSVREYLNEYPEVARTGVNPFVHFLKSGGEGSRAPRPDLGFRYDVIARLVPV CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCH EDRLAQAARASDAVRPGAGLAGALGQIGRRPLHVTFSHDDYTANVGGVQLALQREAAGVA HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEECCCCEEEEEEHHHCCCC AQGRDHLHLHPATPWPMLRTDEPAALGVVWNGQALGAFAAEAVAEALRAAAPARPGERSF CCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHH AIHSLLGHSVDEVLAILAAAGLSEGFFWLHDFASLCAGYHLLRNDVEDCAAPPPDSAACG HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCC ICLYGPWRGRHLSEHERLFRRLKLTVVAPSQPTLDLWRASWDFPVAGTLVHPHARLRSRG EEEECCCCCCCCHHHHHHHHHHEEEEECCCCCCHHHHHCCCCCCCCCEEECCHHHHHHCC AAPAPPAGRPFRLAYAGLPAAHKGWPVFRDLALRLADDPRYEFLHLGLRSTPGLPVRFVE CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEE VAAGPENPRAMQQALEAAEADAVLVWPLCRETFSFVAYEAVAAGCAVITGPDSGNVAAFV EECCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEE RDGGHGAVLDEAALAEAFESGEVLKLGRATRRPALYDLDFGALTADLLPEGTPA EECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA