Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197103950

Identifier: 197103950

GI number: 197103950

Start: 505680

End: 507284

Strand: Direct

Name: 197103950

Synonym: PHZ_c0484

Alternate gene names: NA

Gene position: 505680-507284 (Clockwise)

Preceding gene: 197103946

Following gene: 197103951

Centisome position: 12.65

GC content: 74.02

Gene sequence:

>1605_bases
GTGAGGTCCCTCGTTCCCGCCGCGCTGAAGCTGCGCCTGCTGTCCGGATTCAAGCGCTTCGACCCCGACCGGGCCGTCGT
GGCGGCCGAGTTCGACGCCGCCTGGTACCTGCAGGCCTATCCCGACATCGCCAAGGCCCGGGTGGACCCCCTGGCTCACT
TCATGGCCTTCGGCTGGAAGGAAGGGCGCGATCCGAACCCCCGGTTCTCGGTCCGCGAGTACCTGAACGAATATCCGGAG
GTGGCGCGGACGGGCGTCAATCCGTTCGTGCATTTCCTGAAGTCGGGTGGGGAGGGCAGCCGCGCGCCGCGTCCGGACCT
GGGCTTCCGCTATGACGTGATCGCGCGGCTGGTCCCCGTCGAGGACCGCCTCGCCCAGGCGGCGCGCGCCTCGGACGCGG
TCCGGCCGGGGGCGGGGCTCGCCGGCGCCCTGGGCCAGATCGGCCGCCGACCGCTGCACGTCACCTTCAGCCACGACGAC
TACACGGCCAATGTCGGCGGGGTGCAGCTCGCCTTGCAGCGCGAGGCCGCGGGCGTGGCGGCGCAGGGCCGCGACCACCT
GCACCTGCACCCGGCGACGCCCTGGCCGATGCTCCGGACGGACGAGCCCGCCGCGCTGGGCGTGGTCTGGAACGGCCAGG
CGCTGGGCGCCTTCGCCGCCGAAGCGGTCGCCGAAGCCCTGCGCGCGGCGGCTCCCGCCCGCCCCGGCGAGCGCAGCTTC
GCCATTCACAGCCTGCTCGGTCATTCCGTCGACGAGGTCTTAGCGATCCTGGCGGCGGCGGGGCTGTCCGAAGGCTTCTT
CTGGCTGCACGACTTCGCGAGCCTGTGCGCGGGCTACCACCTGCTGCGCAACGACGTGGAGGATTGCGCGGCCCCGCCGC
CGGACAGCGCCGCCTGCGGCATCTGCTTGTACGGTCCCTGGCGCGGCCGGCACCTGTCCGAGCACGAGCGGCTGTTCCGG
CGCCTGAAGCTCACCGTGGTCGCTCCCTCGCAACCGACGCTCGACCTGTGGCGGGCGTCCTGGGACTTCCCGGTCGCCGG
AACCCTCGTCCATCCTCACGCCCGCCTTCGCTCCCGCGGGGCCGCGCCGGCTCCGCCCGCGGGGCGGCCGTTCCGCCTCG
CCTACGCCGGCCTACCGGCGGCCCACAAGGGCTGGCCGGTGTTCCGCGACCTGGCGCTGAGGCTGGCCGACGACCCGCGC
TACGAGTTCCTGCATCTGGGCCTGCGCAGCACGCCCGGACTGCCGGTCCGGTTCGTCGAGGTCGCGGCGGGCCCCGAGAA
CCCGCGCGCCATGCAGCAGGCGCTGGAGGCCGCCGAGGCCGACGCGGTGCTGGTCTGGCCGCTCTGCCGCGAGACGTTCT
CGTTCGTCGCCTACGAGGCCGTGGCCGCCGGCTGCGCCGTCATCACCGGGCCCGACAGCGGCAACGTCGCCGCCTTCGTC
CGCGACGGAGGTCATGGCGCGGTGCTGGACGAGGCCGCCCTCGCCGAGGCTTTCGAGAGTGGCGAGGTCCTGAAGCTGGG
GCGGGCCACGCGGCGGCCGGCCCTCTACGACCTGGACTTCGGCGCGCTCACCGCCGACCTGCTCCCCGAGGGGACCCCCG
CATGA

Upstream 100 bases:

>100_bases
AGTCGGGTTCGATCCGCACGCTCGCCCGCCGCCGGCGCGAGGCGCGGCTGTACGATCTCAGCTTCAGCGGCATGACCGCC
GACCTTGTGGAGGCCATGGC

Downstream 100 bases:

>100_bases
AAGTGCTCGTCTATTCCAGCTTCACGTTCTCGTACCTGAACCGGGCGCGGGTGCTCTACCAGACCCTGCGGCGGTTCCAT
CCCGACTGGGAGCTGGTGGC

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MRSLVPAALKLRLLSGFKRFDPDRAVVAAEFDAAWYLQAYPDIAKARVDPLAHFMAFGWKEGRDPNPRFSVREYLNEYPE
VARTGVNPFVHFLKSGGEGSRAPRPDLGFRYDVIARLVPVEDRLAQAARASDAVRPGAGLAGALGQIGRRPLHVTFSHDD
YTANVGGVQLALQREAAGVAAQGRDHLHLHPATPWPMLRTDEPAALGVVWNGQALGAFAAEAVAEALRAAAPARPGERSF
AIHSLLGHSVDEVLAILAAAGLSEGFFWLHDFASLCAGYHLLRNDVEDCAAPPPDSAACGICLYGPWRGRHLSEHERLFR
RLKLTVVAPSQPTLDLWRASWDFPVAGTLVHPHARLRSRGAAPAPPAGRPFRLAYAGLPAAHKGWPVFRDLALRLADDPR
YEFLHLGLRSTPGLPVRFVEVAAGPENPRAMQQALEAAEADAVLVWPLCRETFSFVAYEAVAAGCAVITGPDSGNVAAFV
RDGGHGAVLDEAALAEAFESGEVLKLGRATRRPALYDLDFGALTADLLPEGTPA

Sequences:

>Translated_534_residues
MRSLVPAALKLRLLSGFKRFDPDRAVVAAEFDAAWYLQAYPDIAKARVDPLAHFMAFGWKEGRDPNPRFSVREYLNEYPE
VARTGVNPFVHFLKSGGEGSRAPRPDLGFRYDVIARLVPVEDRLAQAARASDAVRPGAGLAGALGQIGRRPLHVTFSHDD
YTANVGGVQLALQREAAGVAAQGRDHLHLHPATPWPMLRTDEPAALGVVWNGQALGAFAAEAVAEALRAAAPARPGERSF
AIHSLLGHSVDEVLAILAAAGLSEGFFWLHDFASLCAGYHLLRNDVEDCAAPPPDSAACGICLYGPWRGRHLSEHERLFR
RLKLTVVAPSQPTLDLWRASWDFPVAGTLVHPHARLRSRGAAPAPPAGRPFRLAYAGLPAAHKGWPVFRDLALRLADDPR
YEFLHLGLRSTPGLPVRFVEVAAGPENPRAMQQALEAAEADAVLVWPLCRETFSFVAYEAVAAGCAVITGPDSGNVAAFV
RDGGHGAVLDEAALAEAFESGEVLKLGRATRRPALYDLDFGALTADLLPEGTPA
>Mature_534_residues
MRSLVPAALKLRLLSGFKRFDPDRAVVAAEFDAAWYLQAYPDIAKARVDPLAHFMAFGWKEGRDPNPRFSVREYLNEYPE
VARTGVNPFVHFLKSGGEGSRAPRPDLGFRYDVIARLVPVEDRLAQAARASDAVRPGAGLAGALGQIGRRPLHVTFSHDD
YTANVGGVQLALQREAAGVAAQGRDHLHLHPATPWPMLRTDEPAALGVVWNGQALGAFAAEAVAEALRAAAPARPGERSF
AIHSLLGHSVDEVLAILAAAGLSEGFFWLHDFASLCAGYHLLRNDVEDCAAPPPDSAACGICLYGPWRGRHLSEHERLFR
RLKLTVVAPSQPTLDLWRASWDFPVAGTLVHPHARLRSRGAAPAPPAGRPFRLAYAGLPAAHKGWPVFRDLALRLADDPR
YEFLHLGLRSTPGLPVRFVEVAAGPENPRAMQQALEAAEADAVLVWPLCRETFSFVAYEAVAAGCAVITGPDSGNVAAFV
RDGGHGAVLDEAALAEAFESGEVLKLGRATRRPALYDLDFGALTADLLPEGTPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57479; Mature: 57479

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLVPAALKLRLLSGFKRFDPDRAVVAAEFDAAWYLQAYPDIAKARVDPLAHFMAFGWK
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHCCHHHHHHHHHHHHHHHHCCC
EGRDPNPRFSVREYLNEYPEVARTGVNPFVHFLKSGGEGSRAPRPDLGFRYDVIARLVPV
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCH
EDRLAQAARASDAVRPGAGLAGALGQIGRRPLHVTFSHDDYTANVGGVQLALQREAAGVA
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEECCCCEEEEEEHHHCCCC
AQGRDHLHLHPATPWPMLRTDEPAALGVVWNGQALGAFAAEAVAEALRAAAPARPGERSF
CCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHH
AIHSLLGHSVDEVLAILAAAGLSEGFFWLHDFASLCAGYHLLRNDVEDCAAPPPDSAACG
HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCC
ICLYGPWRGRHLSEHERLFRRLKLTVVAPSQPTLDLWRASWDFPVAGTLVHPHARLRSRG
EEEECCCCCCCCHHHHHHHHHHEEEEECCCCCCHHHHHCCCCCCCCCEEECCHHHHHHCC
AAPAPPAGRPFRLAYAGLPAAHKGWPVFRDLALRLADDPRYEFLHLGLRSTPGLPVRFVE
CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEE
VAAGPENPRAMQQALEAAEADAVLVWPLCRETFSFVAYEAVAAGCAVITGPDSGNVAAFV
EECCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEE
RDGGHGAVLDEAALAEAFESGEVLKLGRATRRPALYDLDFGALTADLLPEGTPA
EECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRSLVPAALKLRLLSGFKRFDPDRAVVAAEFDAAWYLQAYPDIAKARVDPLAHFMAFGWK
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHCCHHHHHHHHHHHHHHHHCCC
EGRDPNPRFSVREYLNEYPEVARTGVNPFVHFLKSGGEGSRAPRPDLGFRYDVIARLVPV
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCH
EDRLAQAARASDAVRPGAGLAGALGQIGRRPLHVTFSHDDYTANVGGVQLALQREAAGVA
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEECCCCEEEEEEHHHCCCC
AQGRDHLHLHPATPWPMLRTDEPAALGVVWNGQALGAFAAEAVAEALRAAAPARPGERSF
CCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHH
AIHSLLGHSVDEVLAILAAAGLSEGFFWLHDFASLCAGYHLLRNDVEDCAAPPPDSAACG
HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCC
ICLYGPWRGRHLSEHERLFRRLKLTVVAPSQPTLDLWRASWDFPVAGTLVHPHARLRSRG
EEEECCCCCCCCHHHHHHHHHHEEEEECCCCCCHHHHHCCCCCCCCCEEECCHHHHHHCC
AAPAPPAGRPFRLAYAGLPAAHKGWPVFRDLALRLADDPRYEFLHLGLRSTPGLPVRFVE
CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEE
VAAGPENPRAMQQALEAAEADAVLVWPLCRETFSFVAYEAVAAGCAVITGPDSGNVAAFV
EECCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEE
RDGGHGAVLDEAALAEAFESGEVLKLGRATRRPALYDLDFGALTADLLPEGTPA
EECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA