| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is yfiQ [H]
Identifier: 197103925
GI number: 197103925
Start: 472840
End: 475509
Strand: Reverse
Name: yfiQ [H]
Synonym: PHZ_c0459
Alternate gene names: 197103925
Gene position: 475509-472840 (Counterclockwise)
Preceding gene: 197103929
Following gene: 197103921
Centisome position: 11.9
GC content: 74.76
Gene sequence:
>2670_bases ATGACCACCCGCAATTTCGACTCCCTCTTCCGCCCCCGGGCGATCGCCCTGATCGGGGCCAGCGACCGTCCCGGCTCCGT CGGCGACGTCGTAGCCCGCAACCTGAAGGCCGGCGGCTTCCCCGGCCCGCTGATGTTCGTCAATCCGAAGGGCAAGACGA TCCTGGGCGAGACCGCCTTCCGGTCGGTCGCCGACCTGCCCCACGCGCCGGACCTGGCGGTGATCGCCACGCCCGCGCCG ACCCTGCCGGGGCTCGTCAGCGACCTGGGCGCTCGGGGCTGCCGGGCGGCGGTGGTGATCAGCGCGGGCTTCGAGGCCCA GGACGAGGCGACGGCGCGGCTGCGCCAGGCGCTGCTCGACGCGGCCCGTCCGCACCTGCTGCGGATCGTCGGCCCCAACT GCCTTGGATTCATGTCGCCGCGGCGGGGGATCAACGCCAGCTTCGCCCGCGGCTCGGCGCCGCCCGGCGGCGTCGCCCTG GTCGCCCAGTCGGGGGCCGTGGCCTCGGCCCTGCTCGACTGGGCCCCGGCGCACGGCGTCGGCTTCTCGCACGTGGTCAC CCTGGGCAACGCCCTCGACGTCGACGTCGCCGACATGCTGGACCACCTGGGACGCGATCCCGAGACCAAGGCGATCCTGC TCTACCTCGAGGGCCTGCGGGAGGCGCGGAAGTTCATGAGCGCCGCCCGGTTCGCGGCCCGCTCGAAGCCGGTGGTGGTG ATCAAGGGCGGCCGGGGCGCGGCCGGCGCCAAGGCGGCGTTCTCGCACACCGGCGCGCTCGCGGGGGCCGACGCCGTCTA CGCCGCCGCCTTCCGCCGCGCGGGCCTGCTGCAGGTCGCCGAACTGAGCGACTTCCTGGAGGCCGCCGAGACCTTCGCCC GCGGCCACCCCCGCAGCGTCGAGCGGCTGGCCATCGTCACCAATGGCGGCGGCGCGGGCGTCCTGGCGGTGGATGCGCTG GAGCGCGAAGGCGCGCCCCTCGCCGAGCTCTCGCCGCAGACGATCGAGGCGCTCGGCCGGGTCGCCCCGGCGAACTGGTC GCGGCGCAATCCCGTCGACATCCTGGGCGACACACCCGCCCAGCTCTACGGCGAGGCCGTGTCCATCCTGGCCGCCGCGC CCGAGGTGGACGCCATCCTGGCGATCAACTGCCCGACCGCGGTCACCGACAGCACCGAGGCCGCCGAGGCGGTCATCGCC GCGACCCCGCGCGGCTGGGCGCCCAAGCCGGTGCTGACCGCCTGGCTGGGCGGCGCCTCCGTCGCCCAGGCGCGGGCCCG CTTCACCGCCGAGGGCCTGCCCACCTACGAGACGCCCGAGGCCGCCGTCCGCGCCTTCGCCCTCAAGCGCGACTGCGGCC ACGCCCGCGAGCGCCTGCTGCACGCCCCGGACGGCAGCGAGGGGGCCGGCGACATGGCCGCGGCCCGCGCCGTGGTCGAG GGCGTCCTCGCCGAGGGCCGCAGCTCGCTGGCGCCGCTGGAGATCCAGGCCGTGCTGCGGGCCTACGGCGTCCCGATCCT GGAGACCCGCATCGTCCGCGATCCGACCCAGGCCGGAGAGGCGGCGGAGGCGCTGGGCGGGCCGGTGGCGCTGAAGATCC TGTCCCGCGACATCCCCCACAAATCCGATGTCGGCGGCGTGCGGCTGGACCTCGAAGGCCGCGGGCCGGTGGAGCGGGCC GCCGGCGACATGTTGGCCAACGTGGCGCGGCTGCGTCCCGACGCCCACGTCGAGGGCTTCATGCTCCAGCCGATGGTCGT CCGTCCAAAGGCCCAGGAGATCCTGGCGGGCATCGTGCAGGATCCGGTGTTCGGCCCCCTCGTGATGGTCGGCGCGGGCG GCGTCGCGGTGGAGGTCCTGGCCGACCGGGCGCTGGGCTTCCCGCCTCTGAACGAGGCCCTGGCGCGGGAGATGATCGGG ACGACCCGCATCTCGCGTCTCCTGGCGGGCTTCCGCGACCGCCCCCCCGCCGATCTCGCCGCCCTGGCGAAGCTGCTGGT GGCGCTCGGGCGGCTCTCCACCGACGTGCCCGAGATCGTCGAGCTCGACCTCAATCCGGTGCTCTGCGACGAGAGCGGGG CCATCGCCCTGGACGCGCGCATCGCCGTGCGCCGGCCGGACCTGTCGACGCCCCGGCCCGCGATCCTGCCCTACCCCGCC CACCTGACCCACCAGGTGAAGCTGGGCGACCTTTCCCTGTGCGTGCGCCCCATCCGCCCGGCCGACGCCGAGCGCCTGGT GGACATGGTGGACCGCAGCACGGACGAGGACGTGCACATGCGCTTCTTCGGGGGGATGCGGCGCCTGACGCCGGACCTCG CCCTGCGCCTGACCCAGATCGACTACGACCGGCACATGGCCTTCGTCGCCGAGGCCGAGAACGGCGAGATCCTGGGCGTC GGCCGGCTGGTGGAGGATCCCGAGGGCGGCAGCGGCGAATACGCCCTGATGGTCCGCAGCGACCACCAGGACCGGGGCCT GGGGCGGATGCTGCTGAAGGAGGTGCTGGACTACGCCGACGCCCGCGGGCTCGGCGAGGTGTGGGGCGACGTCGCCCGCG AGAACCACCGGATGCGGAGCATGGCCGAGGCCTTCGGCTTCCGCACCCGGACGGACGAGAGCGATCTTGGCCGGGTGCGC GTCGTGTGGAGCCCGGCCGAGACGGTGTGA
Upstream 100 bases:
>100_bases CGGCGGCCAGAAAATGCGACGGCCAGAAAATGCGACGGTCAGGCCGCGGATTGCGGGTTATCAAGGAGCCTTCGGACGCC AGAGCGCATTCCCGCCGCCG
Downstream 100 bases:
>100_bases GCGGCCTCAGTGGGCCCGGCGCAGCGCCACCTCGGGCTCGCGCGGCAGGCCGAAGGCCCGCAGCGCGGCCGGCAGCCGCA GGGCCGCGCGGGTGGCCTCG
Product: acetyl-CoA synthetase / acetyltransferase (GNAT) family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 889; Mature: 888
Protein sequence:
>889_residues MTTRNFDSLFRPRAIALIGASDRPGSVGDVVARNLKAGGFPGPLMFVNPKGKTILGETAFRSVADLPHAPDLAVIATPAP TLPGLVSDLGARGCRAAVVISAGFEAQDEATARLRQALLDAARPHLLRIVGPNCLGFMSPRRGINASFARGSAPPGGVAL VAQSGAVASALLDWAPAHGVGFSHVVTLGNALDVDVADMLDHLGRDPETKAILLYLEGLREARKFMSAARFAARSKPVVV IKGGRGAAGAKAAFSHTGALAGADAVYAAAFRRAGLLQVAELSDFLEAAETFARGHPRSVERLAIVTNGGGAGVLAVDAL EREGAPLAELSPQTIEALGRVAPANWSRRNPVDILGDTPAQLYGEAVSILAAAPEVDAILAINCPTAVTDSTEAAEAVIA ATPRGWAPKPVLTAWLGGASVAQARARFTAEGLPTYETPEAAVRAFALKRDCGHARERLLHAPDGSEGAGDMAAARAVVE GVLAEGRSSLAPLEIQAVLRAYGVPILETRIVRDPTQAGEAAEALGGPVALKILSRDIPHKSDVGGVRLDLEGRGPVERA AGDMLANVARLRPDAHVEGFMLQPMVVRPKAQEILAGIVQDPVFGPLVMVGAGGVAVEVLADRALGFPPLNEALAREMIG TTRISRLLAGFRDRPPADLAALAKLLVALGRLSTDVPEIVELDLNPVLCDESGAIALDARIAVRRPDLSTPRPAILPYPA HLTHQVKLGDLSLCVRPIRPADAERLVDMVDRSTDEDVHMRFFGGMRRLTPDLALRLTQIDYDRHMAFVAEAENGEILGV GRLVEDPEGGSGEYALMVRSDHQDRGLGRMLLKEVLDYADARGLGEVWGDVARENHRMRSMAEAFGFRTRTDESDLGRVR VVWSPAETV
Sequences:
>Translated_889_residues MTTRNFDSLFRPRAIALIGASDRPGSVGDVVARNLKAGGFPGPLMFVNPKGKTILGETAFRSVADLPHAPDLAVIATPAP TLPGLVSDLGARGCRAAVVISAGFEAQDEATARLRQALLDAARPHLLRIVGPNCLGFMSPRRGINASFARGSAPPGGVAL VAQSGAVASALLDWAPAHGVGFSHVVTLGNALDVDVADMLDHLGRDPETKAILLYLEGLREARKFMSAARFAARSKPVVV IKGGRGAAGAKAAFSHTGALAGADAVYAAAFRRAGLLQVAELSDFLEAAETFARGHPRSVERLAIVTNGGGAGVLAVDAL EREGAPLAELSPQTIEALGRVAPANWSRRNPVDILGDTPAQLYGEAVSILAAAPEVDAILAINCPTAVTDSTEAAEAVIA ATPRGWAPKPVLTAWLGGASVAQARARFTAEGLPTYETPEAAVRAFALKRDCGHARERLLHAPDGSEGAGDMAAARAVVE GVLAEGRSSLAPLEIQAVLRAYGVPILETRIVRDPTQAGEAAEALGGPVALKILSRDIPHKSDVGGVRLDLEGRGPVERA AGDMLANVARLRPDAHVEGFMLQPMVVRPKAQEILAGIVQDPVFGPLVMVGAGGVAVEVLADRALGFPPLNEALAREMIG TTRISRLLAGFRDRPPADLAALAKLLVALGRLSTDVPEIVELDLNPVLCDESGAIALDARIAVRRPDLSTPRPAILPYPA HLTHQVKLGDLSLCVRPIRPADAERLVDMVDRSTDEDVHMRFFGGMRRLTPDLALRLTQIDYDRHMAFVAEAENGEILGV GRLVEDPEGGSGEYALMVRSDHQDRGLGRMLLKEVLDYADARGLGEVWGDVARENHRMRSMAEAFGFRTRTDESDLGRVR VVWSPAETV >Mature_888_residues TTRNFDSLFRPRAIALIGASDRPGSVGDVVARNLKAGGFPGPLMFVNPKGKTILGETAFRSVADLPHAPDLAVIATPAPT LPGLVSDLGARGCRAAVVISAGFEAQDEATARLRQALLDAARPHLLRIVGPNCLGFMSPRRGINASFARGSAPPGGVALV AQSGAVASALLDWAPAHGVGFSHVVTLGNALDVDVADMLDHLGRDPETKAILLYLEGLREARKFMSAARFAARSKPVVVI KGGRGAAGAKAAFSHTGALAGADAVYAAAFRRAGLLQVAELSDFLEAAETFARGHPRSVERLAIVTNGGGAGVLAVDALE REGAPLAELSPQTIEALGRVAPANWSRRNPVDILGDTPAQLYGEAVSILAAAPEVDAILAINCPTAVTDSTEAAEAVIAA TPRGWAPKPVLTAWLGGASVAQARARFTAEGLPTYETPEAAVRAFALKRDCGHARERLLHAPDGSEGAGDMAAARAVVEG VLAEGRSSLAPLEIQAVLRAYGVPILETRIVRDPTQAGEAAEALGGPVALKILSRDIPHKSDVGGVRLDLEGRGPVERAA GDMLANVARLRPDAHVEGFMLQPMVVRPKAQEILAGIVQDPVFGPLVMVGAGGVAVEVLADRALGFPPLNEALAREMIGT TRISRLLAGFRDRPPADLAALAKLLVALGRLSTDVPEIVELDLNPVLCDESGAIALDARIAVRRPDLSTPRPAILPYPAH LTHQVKLGDLSLCVRPIRPADAERLVDMVDRSTDEDVHMRFFGGMRRLTPDLALRLTQIDYDRHMAFVAEAENGEILGVG RLVEDPEGGSGEYALMVRSDHQDRGLGRMLLKEVLDYADARGLGEVWGDVARENHRMRSMAEAFGFRTRTDESDLGRVRV VWSPAETV
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=875, Percent_Identity=38.5142857142857, Blast_Score=562, Evalue=1e-161,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 93702; Mature: 93571
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRNFDSLFRPRAIALIGASDRPGSVGDVVARNLKAGGFPGPLMFVNPKGKTILGETAF CCCCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCEEECHHHH RSVADLPHAPDLAVIATPAPTLPGLVSDLGARGCRAAVVISAGFEAQDEATARLRQALLD HHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH AARPHLLRIVGPNCLGFMSPRRGINASFARGSAPPGGVALVAQSGAVASALLDWAPAHGV HCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCC GFSHVVTLGNALDVDVADMLDHLGRDPETKAILLYLEGLREARKFMSAARFAARSKPVVV CHHHHHEECCCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEE IKGGRGAAGAKAAFSHTGALAGADAVYAAAFRRAGLLQVAELSDFLEAAETFARGHPRSV EECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC ERLAIVTNGGGAGVLAVDALEREGAPLAELSPQTIEALGRVAPANWSRRNPVDILGDTPA EEEEEEECCCCCCEEEEEHHHHCCCCHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHH QLYGEAVSILAAAPEVDAILAINCPTAVTDSTEAAEAVIAATPRGWAPKPVLTAWLGGAS HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHEEEEECCCCCCCCHHHHHHCCCHH VAQARARFTAEGLPTYETPEAAVRAFALKRDCGHARERLLHAPDGSEGAGDMAAARAVVE HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHH GVLAEGRSSLAPLEIQAVLRAYGVPILETRIVRDPTQAGEAAEALGGPVALKILSRDIPH HHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHCHHHHHHCCHHEEHHHHCCCCC KSDVGGVRLDLEGRGPVERAAGDMLANVARLRPDAHVEGFMLQPMVVRPKAQEILAGIVQ CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCEEECCCHHHHHHHHHC DPVFGPLVMVGAGGVAVEVLADRALGFPPLNEALAREMIGTTRISRLLAGFRDRPPADLA CCCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ALAKLLVALGRLSTDVPEIVELDLNPVLCDESGAIALDARIAVRRPDLSTPRPAILPYPA HHHHHHHHHHHHCCCCCHHHEECCCEEEECCCCCEEEEEEEEEECCCCCCCCCCEECCCC HLTHQVKLGDLSLCVRPIRPADAERLVDMVDRSTDEDVHMRFFGGMRRLTPDLALRLTQI CCEEEEEECCHHHHEECCCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHCCHHHHEEEHEE DYDRHMAFVAEAENGEILGVGRLVEDPEGGSGEYALMVRSDHQDRGLGRMLLKEVLDYAD CCCCCEEEEEECCCCCEEEECCEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHC ARGLGEVWGDVARENHRMRSMAEAFGFRTRTDESDLGRVRVVWSPAETV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure TTRNFDSLFRPRAIALIGASDRPGSVGDVVARNLKAGGFPGPLMFVNPKGKTILGETAF CCCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCEEECHHHH RSVADLPHAPDLAVIATPAPTLPGLVSDLGARGCRAAVVISAGFEAQDEATARLRQALLD HHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH AARPHLLRIVGPNCLGFMSPRRGINASFARGSAPPGGVALVAQSGAVASALLDWAPAHGV HCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCC GFSHVVTLGNALDVDVADMLDHLGRDPETKAILLYLEGLREARKFMSAARFAARSKPVVV CHHHHHEECCCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEE IKGGRGAAGAKAAFSHTGALAGADAVYAAAFRRAGLLQVAELSDFLEAAETFARGHPRSV EECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC ERLAIVTNGGGAGVLAVDALEREGAPLAELSPQTIEALGRVAPANWSRRNPVDILGDTPA EEEEEEECCCCCCEEEEEHHHHCCCCHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHH QLYGEAVSILAAAPEVDAILAINCPTAVTDSTEAAEAVIAATPRGWAPKPVLTAWLGGAS HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHEEEEECCCCCCCCHHHHHHCCCHH VAQARARFTAEGLPTYETPEAAVRAFALKRDCGHARERLLHAPDGSEGAGDMAAARAVVE HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHH GVLAEGRSSLAPLEIQAVLRAYGVPILETRIVRDPTQAGEAAEALGGPVALKILSRDIPH HHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHCHHHHHHCCHHEEHHHHCCCCC KSDVGGVRLDLEGRGPVERAAGDMLANVARLRPDAHVEGFMLQPMVVRPKAQEILAGIVQ CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCEEECCCHHHHHHHHHC DPVFGPLVMVGAGGVAVEVLADRALGFPPLNEALAREMIGTTRISRLLAGFRDRPPADLA CCCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ALAKLLVALGRLSTDVPEIVELDLNPVLCDESGAIALDARIAVRRPDLSTPRPAILPYPA HHHHHHHHHHHHCCCCCHHHEECCCEEEECCCCCEEEEEEEEEECCCCCCCCCCEECCCC HLTHQVKLGDLSLCVRPIRPADAERLVDMVDRSTDEDVHMRFFGGMRRLTPDLALRLTQI CCEEEEEECCHHHHEECCCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHCCHHHHEEEHEE DYDRHMAFVAEAENGEILGVGRLVEDPEGGSGEYALMVRSDHQDRGLGRMLLKEVLDYAD CCCCCEEEEEECCCCCEEEECCEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHC ARGLGEVWGDVARENHRMRSMAEAFGFRTRTDESDLGRVRVVWSPAETV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]